| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158334021
Identifier: 158334021
GI number: 158334021
Start: 817478
End: 819475
Strand: Direct
Name: 158334021
Synonym: AM1_0835
Alternate gene names: NA
Gene position: 817478-819475 (Clockwise)
Preceding gene: 158334020
Following gene: 158334022
Centisome position: 12.57
GC content: 51.65
Gene sequence:
>1998_bases ATGCAAAAGAAGGTTGTGATCCTTGGTGGAGGCGTGGCTGGACTGAGTGCCGCCCATGAGCTGATTGAACGAGGGTTTGC CGTAGACGTATACGAAGCCAAGAAAATTCCTGGAGGAAAGGCCCGCAGTATTCCCGTGCCCAATACCGGAGGCATGGGCC CCAATGGTCCTCGAAAGCCCCTGCCCGGAGAACATGGCTTCCGATTTTTCCCTCGCTTCTACAAACATATTGTTGATACC ATGGCGCGGATTCCTTATGGGAAAAACAAAACCGTTGCCGATAATCTGGTCGATACAACGCGAGTTGAAATGGCCCGCTA TGGCCAACGTCCCATCGTATTTCCATCCCGTTCTCCTCGCACCTTTGCAGATGTCCAGGAAATCCTCAATGAGTTTCCCA CCATTTTTGGGCCAGACTTTGGCGTCTCTCCCGAAGAAATTGCTTTTTTTGGCACCAAAGTCTGGCAAATCGTCACTTCT TGCGAAGAACGGCGCTTAGCGGAATATGAGAAAGAAGACTGGTGGGAGTTTGTAGGGGCAGACCAGCGTTCCCCGGCCTA TCAGAAAATTTTTGGTCATGGCATCACCCGTTCCCTGGTCGCGGCAAAGGCTCATCTGGCGAGTACCAAAACCATTGGCG ATATTTTTGTCCAGCTTCTGTTTGATTTAGTAGAGCCGGGACCGAGTAGCGATCGCGTTCTCAATGCGCCCACCAACGAT GCCTGGATCAACCCTTGGCTGGCCTACTTAATTCGACAAGGGGTGCAATATCATCTGGAGGCCAAGGTCTTAGCCATTGA CTGTGTGAATGGACTGATTCAGGGAGCCACGATTGAGCAAGATGGCCAGACTTTTCAGGCTCAAGGGGACTATTACATCG CCGCAGTCCCGATCGAGCGCATGGCGGAGCTGGTGACCGACAGCCTCAAAACGGCGGATCCAGAATTAGGGAAGCTCCAT CAGCTCAGCGAAGGCGGGGTGTCCTGGATGAATGGCATTCAGCTTTATTTAACGCAGGATGTGCCCCTGTCCCACGGCCA TGCGATTTATGTCGATTCTCCCTGGGCGCTCACCTCTATTTCCCAACGACAGTTTTGGCCAGGGGTTGATTTTAATCAAT ATGCCGACGGTCGGATTAAAGGCATCATCTCTGTTGATATTTCCGAGTGGGATGAAAAGGGCCTCAATGGCAAAACTGCC AAGGAATGCACGCGGGAGGAAGTTAAAAATGAGGTGTGGGCGCAACTCAAAAAGAGCATCAATATCCACGGCCAGGAAAT TCTCAAGGATGAATATTTAGACCATTGGTTTTTGGATCCGGCGATTTACCTGGTCGAGGGGGAAGGAGATACCAATGAAG AACCGCTGCTGGTCAATTTAATTAATACTTGGGTGAAACGCCCAGACGCGGTGACGGATATTCCCAATCTATTTCTTGCG TCCGATTATGTTCGCACCTATACGGATCTGGCGACCATGGAAGGGGCCAATGAAGCGGCTCGCCGCGCTGTCAACGGCAT TATTGAGTCGGCCAACATGGATGCCCCTCCATGCAAGATCTGGAAGCTGCATGAGCAAGAAATTTTTGAACCCTGGCGAG TGATCGATCGCATTCGGTTTCACCAGGGCTTACCCTGGGATGACAGTTTGGTGCGATGGGGATTATCGGCTCTCAAGTTA GCCCACCAAGGTGGCCGAATTCTGGAGCAGTTGCTCGGGGTCACCATTGATCAGCCCCTGGAAAAATTAGGTAACCCCCT CTATGCGGTCGGCACCCAAGGCTTTGACAATGTTGAACTGCGGCAAGAGCTGATGGAGGTGGTGCAAAAGTCAGTGCTAG ATATTGTGGTGCGGATGGCGGAGTCCCAAACGATGCCTGAAACCATCCCTAGCTTGGCTACACTCCAAACATTATCCGAA CAGCACCACCCCTCTTTTGTTCAGTCCTCTAAACAGCCCCCTCAGCGTTCCGGAAAAGTCCGCATTATTCCTGAGTGA
Upstream 100 bases:
>100_bases TTGTCCTGAGAGTGAAGGAAGAGGGTGCCGTGAGTGCCTTTTCTTTGCCCTAAACCCAAATTTTGATCCCCATCCCCCCT CATAGCAGACAGGAAACATC
Downstream 100 bases:
>100_bases TGACGAGTCTCCTCCCCTATCCGCTAGCTAGAGGTGTCTGGTGTCCCTAGCTGCCCTTACCCCTCCGGATCTAGAGACCC TTCAGGTCCATCTCGGTCAT
Product: phytoene dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase; FAD Dependent Oxidoreductase; Flavin Containing Oxidoreductase; Phytoene Dehydrogenase; Polyprenyl Synthetase
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MQKKVVILGGGVAGLSAAHELIERGFAVDVYEAKKIPGGKARSIPVPNTGGMGPNGPRKPLPGEHGFRFFPRFYKHIVDT MARIPYGKNKTVADNLVDTTRVEMARYGQRPIVFPSRSPRTFADVQEILNEFPTIFGPDFGVSPEEIAFFGTKVWQIVTS CEERRLAEYEKEDWWEFVGADQRSPAYQKIFGHGITRSLVAAKAHLASTKTIGDIFVQLLFDLVEPGPSSDRVLNAPTND AWINPWLAYLIRQGVQYHLEAKVLAIDCVNGLIQGATIEQDGQTFQAQGDYYIAAVPIERMAELVTDSLKTADPELGKLH QLSEGGVSWMNGIQLYLTQDVPLSHGHAIYVDSPWALTSISQRQFWPGVDFNQYADGRIKGIISVDISEWDEKGLNGKTA KECTREEVKNEVWAQLKKSINIHGQEILKDEYLDHWFLDPAIYLVEGEGDTNEEPLLVNLINTWVKRPDAVTDIPNLFLA SDYVRTYTDLATMEGANEAARRAVNGIIESANMDAPPCKIWKLHEQEIFEPWRVIDRIRFHQGLPWDDSLVRWGLSALKL AHQGGRILEQLLGVTIDQPLEKLGNPLYAVGTQGFDNVELRQELMEVVQKSVLDIVVRMAESQTMPETIPSLATLQTLSE QHHPSFVQSSKQPPQRSGKVRIIPE
Sequences:
>Translated_665_residues MQKKVVILGGGVAGLSAAHELIERGFAVDVYEAKKIPGGKARSIPVPNTGGMGPNGPRKPLPGEHGFRFFPRFYKHIVDT MARIPYGKNKTVADNLVDTTRVEMARYGQRPIVFPSRSPRTFADVQEILNEFPTIFGPDFGVSPEEIAFFGTKVWQIVTS CEERRLAEYEKEDWWEFVGADQRSPAYQKIFGHGITRSLVAAKAHLASTKTIGDIFVQLLFDLVEPGPSSDRVLNAPTND AWINPWLAYLIRQGVQYHLEAKVLAIDCVNGLIQGATIEQDGQTFQAQGDYYIAAVPIERMAELVTDSLKTADPELGKLH QLSEGGVSWMNGIQLYLTQDVPLSHGHAIYVDSPWALTSISQRQFWPGVDFNQYADGRIKGIISVDISEWDEKGLNGKTA KECTREEVKNEVWAQLKKSINIHGQEILKDEYLDHWFLDPAIYLVEGEGDTNEEPLLVNLINTWVKRPDAVTDIPNLFLA SDYVRTYTDLATMEGANEAARRAVNGIIESANMDAPPCKIWKLHEQEIFEPWRVIDRIRFHQGLPWDDSLVRWGLSALKL AHQGGRILEQLLGVTIDQPLEKLGNPLYAVGTQGFDNVELRQELMEVVQKSVLDIVVRMAESQTMPETIPSLATLQTLSE QHHPSFVQSSKQPPQRSGKVRIIPE >Mature_665_residues MQKKVVILGGGVAGLSAAHELIERGFAVDVYEAKKIPGGKARSIPVPNTGGMGPNGPRKPLPGEHGFRFFPRFYKHIVDT MARIPYGKNKTVADNLVDTTRVEMARYGQRPIVFPSRSPRTFADVQEILNEFPTIFGPDFGVSPEEIAFFGTKVWQIVTS CEERRLAEYEKEDWWEFVGADQRSPAYQKIFGHGITRSLVAAKAHLASTKTIGDIFVQLLFDLVEPGPSSDRVLNAPTND AWINPWLAYLIRQGVQYHLEAKVLAIDCVNGLIQGATIEQDGQTFQAQGDYYIAAVPIERMAELVTDSLKTADPELGKLH QLSEGGVSWMNGIQLYLTQDVPLSHGHAIYVDSPWALTSISQRQFWPGVDFNQYADGRIKGIISVDISEWDEKGLNGKTA KECTREEVKNEVWAQLKKSINIHGQEILKDEYLDHWFLDPAIYLVEGEGDTNEEPLLVNLINTWVKRPDAVTDIPNLFLA SDYVRTYTDLATMEGANEAARRAVNGIIESANMDAPPCKIWKLHEQEIFEPWRVIDRIRFHQGLPWDDSLVRWGLSALKL AHQGGRILEQLLGVTIDQPLEKLGNPLYAVGTQGFDNVELRQELMEVVQKSVLDIVVRMAESQTMPETIPSLATLQTLSE QHHPSFVQSSKQPPQRSGKVRIIPE
Specific function: Unknown
COG id: COG3349
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74509; Mature: 74509
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKKVVILGGGVAGLSAAHELIERGFAVDVYEAKKIPGGKARSIPVPNTGGMGPNGPRKP CCCEEEEEECCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGEHGFRFFPRFYKHIVDTMARIPYGKNKTVADNLVDTTRVEMARYGQRPIVFPSRSPR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCC TFADVQEILNEFPTIFGPDFGVSPEEIAFFGTKVWQIVTSCEERRLAEYEKEDWWEFVGA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DQRSPAYQKIFGHGITRSLVAAKAHLASTKTIGDIFVQLLFDLVEPGPSSDRVLNAPTND CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCC AWINPWLAYLIRQGVQYHLEAKVLAIDCVNGLIQGATIEQDGQTFQAQGDYYIAAVPIER CHHHHHHHHHHHHCHHEEHHHHEEHHHHHHHHHCCCEECCCCCEEEECCCEEEEECCHHH MAELVTDSLKTADPELGKLHQLSEGGVSWMNGIQLYLTQDVPLSHGHAIYVDSPWALTSI HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCEEEECCCCHHHCC SQRQFWPGVDFNQYADGRIKGIISVDISEWDEKGLNGKTAKECTREEVKNEVWAQLKKSI HHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC NIHGQEILKDEYLDHWFLDPAIYLVEGEGDTNEEPLLVNLINTWVKRPDAVTDIPNLFLA CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHH SDYVRTYTDLATMEGANEAARRAVNGIIESANMDAPPCKIWKLHEQEIFEPWRVIDRIRF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHH HQGLPWDDSLVRWGLSALKLAHQGGRILEQLLGVTIDQPLEKLGNPLYAVGTQGFDNVEL HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCHHH RQELMEVVQKSVLDIVVRMAESQTMPETIPSLATLQTLSEQHHPSFVQSSKQPPQRSGKV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCE RIIPE EECCC >Mature Secondary Structure MQKKVVILGGGVAGLSAAHELIERGFAVDVYEAKKIPGGKARSIPVPNTGGMGPNGPRKP CCCEEEEEECCHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGEHGFRFFPRFYKHIVDTMARIPYGKNKTVADNLVDTTRVEMARYGQRPIVFPSRSPR CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCC TFADVQEILNEFPTIFGPDFGVSPEEIAFFGTKVWQIVTSCEERRLAEYEKEDWWEFVGA HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DQRSPAYQKIFGHGITRSLVAAKAHLASTKTIGDIFVQLLFDLVEPGPSSDRVLNAPTND CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCC AWINPWLAYLIRQGVQYHLEAKVLAIDCVNGLIQGATIEQDGQTFQAQGDYYIAAVPIER CHHHHHHHHHHHHCHHEEHHHHEEHHHHHHHHHCCCEECCCCCEEEECCCEEEEECCHHH MAELVTDSLKTADPELGKLHQLSEGGVSWMNGIQLYLTQDVPLSHGHAIYVDSPWALTSI HHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCEEEECCCCHHHCC SQRQFWPGVDFNQYADGRIKGIISVDISEWDEKGLNGKTAKECTREEVKNEVWAQLKKSI HHHHCCCCCCCCCCCCCEEEEEEEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC NIHGQEILKDEYLDHWFLDPAIYLVEGEGDTNEEPLLVNLINTWVKRPDAVTDIPNLFLA CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHH SDYVRTYTDLATMEGANEAARRAVNGIIESANMDAPPCKIWKLHEQEIFEPWRVIDRIRF HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHH HQGLPWDDSLVRWGLSALKLAHQGGRILEQLLGVTIDQPLEKLGNPLYAVGTQGFDNVEL HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCEEEECCCCCCCHHH RQELMEVVQKSVLDIVVRMAESQTMPETIPSLATLQTLSEQHHPSFVQSSKQPPQRSGKV HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCE RIIPE EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA