Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158333985

Identifier: 158333985

GI number: 158333985

Start: 776219

End: 777136

Strand: Direct

Name: 158333985

Synonym: AM1_0799

Alternate gene names: NA

Gene position: 776219-777136 (Clockwise)

Preceding gene: 158333984

Following gene: 158333986

Centisome position: 11.93

GC content: 46.73

Gene sequence:

>918_bases
ATGTCTAACGCGCATTCATCTAAGGTTTCAATCTATGCAGCCATGGCTGCCAATATTGCCATTGGCATCGCTAAGTTTAT
CGGTGCCGGAATTAGCGGCAGCTCAGCCATGTTATCAGAGGGCATTCATTCTGTGGTGGATTCCACCAATGAAGTGCTAT
TACTCTACGGTCTTCATAAGAGTGAAACGGGACCAGATGAACAGCATCCCCTGGGCTATGGACAAGAACTTTATTTCTGG
TCTTTGATCGTTGCTGTTTTGATCTTTGCTTTAGGCGGTGGCCTTTCCATCTTTGAAGGCATTACGAGCATGCAAGTGCA
GGCCCCAGCCCATGATCCTATGCTCAGCTATATCGTCTTGGCCGCCTCCGCTGTATTTGAGGGAATTGCTTTATTCGTCT
CGATTCGTGAGTTTAATAAGGCCACCCCGAAAACCTCCAGTAGTTTCTGGAAAACCTTAAGCAACAGCAAAGATCCCAGC
TCGTTTATTGTTATTTTTGAAGACTGTGCTGCGTTGATTGGTCTAGGGGTGGCCTTTATCGGCGTATTTATGACCGAACT
GAAGGGCAATTCTATCTACGACAGTATTGCCTCCATTATCATCGGGCTATTGCTAACCGTGGTTGCCGTTGTGCTGGTTA
TTGAAACCAAAGGTTTACTCATTGGTGAAAGTGCTTCACCAGAAACCCGCGAGAGTATTAAACAGATTGTTAAATCGGAT
GATGCCGTCACTCGCATGGAGTCCCCCATCACCCTCCACTTTGGTCCCCAAGATATAATGTTGGCCATGAACATCGAGTT
TAGAGATGACCTCTCTTCCGATGAGATCGAAGCGGCTACCCGCCGTATTGAGCGAAAAATCCGAGAATCCCACACAGAAG
TAAAGCGTATCTTTCTAGAAGCAGCTTCTGTCGTCTGA

Upstream 100 bases:

>100_bases
TGGGAAAAACCATTTTTGGGGCTGTGGGAGCTTGCAGACTATCTTCCACCACCGCCCTGTCTCACCCTTCAAACGGAACT
AGCGACTCAACTTCACTTTT

Downstream 100 bases:

>100_bases
CCAGCACTATCTAGGGAGCTAGGTGATGAGTCCCCAGCCTTTCCAACCGCCAGACGAATTTGAGTCTTTACTGTCAACTC
AACGCCAAACGAACGCTGAT

Product: cation transporter

Products: NA

Alternate protein names: Cation Efflux Family Protein; Cation Transporter; Cation Efflux Protein; Integral Membrane Protein; Membrane Transporter; Co/Zn/Cd Cation Transporter; Cation Diffusion Facilitator Family Protein; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; CDF Family Transporter; Cation-Efflux Pump; Cation Transporter Permease Component; Cation Efflux Transporter; CDF Family Heavy Metal/H(+) Antiporter; Zinc/Cadmium/Cations Transporter; CDF Family Cation Efflux Protein; Cation Transporter Protein; Cation Efflux System

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFW
SLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPS
SFIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD
DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV

Sequences:

>Translated_305_residues
MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFW
SLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPS
SFIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD
DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV
>Mature_304_residues
SNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHKSETGPDEQHPLGYGQELYFWS
LIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVLAASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSS
FIVIFEDCAALIGLGVAFIGVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSDD
AVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLEAASVV

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI57164948, Length=243, Percent_Identity=32.5102880658436, Blast_Score=149, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI115534117, Length=248, Percent_Identity=31.8548387096774, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24653141, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI24653143, Length=209, Percent_Identity=36.3636363636364, Blast_Score=130, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32790; Mature: 32659

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHK
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
SETGPDEQHPLGYGQELYFWSLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEECCCCCHHHHHHHH
AASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSSFIVIFEDCAALIGLGVAFI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH
GVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC
DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLE
HHHHHHCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASVV
HHHCC
>Mature Secondary Structure 
SNAHSSKVSIYAAMAANIAIGIAKFIGAGISGSSAMLSEGIHSVVDSTNEVLLLYGLHK
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCC
SETGPDEQHPLGYGQELYFWSLIVAVLIFALGGGLSIFEGITSMQVQAPAHDPMLSYIVL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCHHHCEEECCCCCHHHHHHHH
AASAVFEGIALFVSIREFNKATPKTSSSFWKTLSNSKDPSSFIVIFEDCAALIGLGVAFI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH
GVFMTELKGNSIYDSIASIIIGLLLTVVAVVLVIETKGLLIGESASPETRESIKQIVKSD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCC
DAVTRMESPITLHFGPQDIMLAMNIEFRDDLSSDEIEAATRRIERKIRESHTEVKRIFLE
HHHHHHCCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AASVV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA