| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333918
Identifier: 158333918
GI number: 158333918
Start: 715053
End: 716003
Strand: Direct
Name: 158333918
Synonym: AM1_0730
Alternate gene names: NA
Gene position: 715053-716003 (Clockwise)
Preceding gene: 158333917
Following gene: 158333920
Centisome position: 10.99
GC content: 48.37
Gene sequence:
>951_bases ATGATAGCAACAACATCAACCCCGCCCGATCAGGGGTCACAAGAACAGTGGGCCTTGACCCTATCGATTATGGGATCCGC CGTCTTTGCCGTTTTGGGTGGGGTGTTTGGACTCTATACCCATTCTGGCGCTATCTTGCTGGACGGGTTTTATTCCCTGA TGACCATGACCATGAGCTTTGTCAGTCTCAAGGTGGCAGCCCTAATCCAGGAAGGTCCCAGTCGGCGTTACCAGTTTGGC TATTACGGTTTTGAGCCTTTTATTAACACGATTAAAGGCATCATTGTTCTATCGGTTAGTTTGTTCGCTTTCGTTTCTGC GATAGAAGACTTACTGCATGGCGGTCGAGATCTTGTCGTGGGCCTAGCCTTGGCTTACGCGACCCTATCAACAGTCGGGT GTTTTACCTTCGCCATCTTGATGCATCGCTATGCTCAACGGTTGAACTTACCGTTGCTGGAGGTGGAAGCCCGGGACTGG ACAGTAGATGGCTGTATCAGTAGCGCGGTAGCGTTGACCTTTGTAGTGACTTTGTTGCTGCAAGAAACCTCCTGGAATAT TTATCTCTCTTACGTTGACCCGCTGCTGGTTTCCATATTGGTGCTGATTATTATTCCGCTGCCCTTACGTACCGTATTTG AAGGCGTGAATCAGTTATTAGGGGTTGCTCCAGAAAGTGAGTTGGATCGAGAGATTCGCAAGACCATTTCCCAAGTTGCC CGCATTCAAAAACACCCCATCGATCGCTTTCATTTGCAGATGATGGTGCAAGGACGGGTGTTGTATGTGTTTATTCAGAT CTTGGTCCCTGCTGAGTTTGGGGTGGATCGGGTGCAAGAACTAGACCAACTGAGGCAGAAGTTTGCGGATGCGATCGCAG ATTTACATCCATTTCCAGAAATCGATATTGTATTTACGGAAGATCCCTATTGGCTTAAAGATGGCCAATAG
Upstream 100 bases:
>100_bases ATCCAGTGTCACGGGCGAACAATTACGGGAAGAAGTCGTTTGGCTGGAATGGCCAGGGTATAAGCGATTGTCCTCCCCCT AAGCACAGATGGACAGCGAA
Downstream 100 bases:
>100_bases GAAGGAGCTTTTCTATATCACCGCACAATCTCATATTTTTCCGAAATTGGGTTAGCTATCAATACCATGAATTATCAGCA ACCAGAATTCTAGGCCCACC
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter; Cation Efflux System Component; Cation Efflux Family Protein
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIATTSTPPDQGSQEQWALTLSIMGSAVFAVLGGVFGLYTHSGAILLDGFYSLMTMTMSFVSLKVAALIQEGPSRRYQFG YYGFEPFINTIKGIIVLSVSLFAFVSAIEDLLHGGRDLVVGLALAYATLSTVGCFTFAILMHRYAQRLNLPLLEVEARDW TVDGCISSAVALTFVVTLLLQETSWNIYLSYVDPLLVSILVLIIIPLPLRTVFEGVNQLLGVAPESELDREIRKTISQVA RIQKHPIDRFHLQMMVQGRVLYVFIQILVPAEFGVDRVQELDQLRQKFADAIADLHPFPEIDIVFTEDPYWLKDGQ
Sequences:
>Translated_316_residues MIATTSTPPDQGSQEQWALTLSIMGSAVFAVLGGVFGLYTHSGAILLDGFYSLMTMTMSFVSLKVAALIQEGPSRRYQFG YYGFEPFINTIKGIIVLSVSLFAFVSAIEDLLHGGRDLVVGLALAYATLSTVGCFTFAILMHRYAQRLNLPLLEVEARDW TVDGCISSAVALTFVVTLLLQETSWNIYLSYVDPLLVSILVLIIIPLPLRTVFEGVNQLLGVAPESELDREIRKTISQVA RIQKHPIDRFHLQMMVQGRVLYVFIQILVPAEFGVDRVQELDQLRQKFADAIADLHPFPEIDIVFTEDPYWLKDGQ >Mature_316_residues MIATTSTPPDQGSQEQWALTLSIMGSAVFAVLGGVFGLYTHSGAILLDGFYSLMTMTMSFVSLKVAALIQEGPSRRYQFG YYGFEPFINTIKGIIVLSVSLFAFVSAIEDLLHGGRDLVVGLALAYATLSTVGCFTFAILMHRYAQRLNLPLLEVEARDW TVDGCISSAVALTFVVTLLLQETSWNIYLSYVDPLLVSILVLIIIPLPLRTVFEGVNQLLGVAPESELDREIRKTISQVA RIQKHPIDRFHLQMMVQGRVLYVFIQILVPAEFGVDRVQELDQLRQKFADAIADLHPFPEIDIVFTEDPYWLKDGQ
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35225; Mature: 35225
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATTSTPPDQGSQEQWALTLSIMGSAVFAVLGGVFGLYTHSGAILLDGFYSLMTMTMSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VSLKVAALIQEGPSRRYQFGYYGFEPFINTIKGIIVLSVSLFAFVSAIEDLLHGGRDLVV HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLALAYATLSTVGCFTFAILMHRYAQRLNLPLLEVEARDWTVDGCISSAVALTFVVTLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH QETSWNIYLSYVDPLLVSILVLIIIPLPLRTVFEGVNQLLGVAPESELDREIRKTISQVA HHCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RIQKHPIDRFHLQMMVQGRVLYVFIQILVPAEFGVDRVQELDQLRQKFADAIADLHPFPE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC IDIVFTEDPYWLKDGQ EEEEECCCCCCCCCCC >Mature Secondary Structure MIATTSTPPDQGSQEQWALTLSIMGSAVFAVLGGVFGLYTHSGAILLDGFYSLMTMTMSF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VSLKVAALIQEGPSRRYQFGYYGFEPFINTIKGIIVLSVSLFAFVSAIEDLLHGGRDLVV HHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GLALAYATLSTVGCFTFAILMHRYAQRLNLPLLEVEARDWTVDGCISSAVALTFVVTLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH QETSWNIYLSYVDPLLVSILVLIIIPLPLRTVFEGVNQLLGVAPESELDREIRKTISQVA HHCCCEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RIQKHPIDRFHLQMMVQGRVLYVFIQILVPAEFGVDRVQELDQLRQKFADAIADLHPFPE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC IDIVFTEDPYWLKDGQ EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA