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The map label for this gene is secF [H]

Identifier: 158333882

GI number: 158333882

Start: 674829

End: 675788

Strand: Reverse

Name: secF [H]

Synonym: AM1_0694

Alternate gene names: 158333882

Gene position: 675788-674829 (Counterclockwise)

Preceding gene: 158333883

Following gene: 158333880

Centisome position: 10.39

GC content: 49.06

Gene sequence:

>960_bases
ATGAAGTTGAATCTGAATCAGCAACGGGGACTCTGGTGGACCATCTCCGCAGCTTTGATCCTAGCGGGGGTTATTTCCAT
GGCTCTGTCCTGGAATCAATATCAGGCTCCCCTTAAGCCCGGCCTCGACTTTACCGGTGGTACTCGCCTACAGCTAGAGC
GAGACTGTAGCAAACCTGACAACTGCAAAACCCCCATCCAGATTGCAGAGGTTCGCCAGATTCTAGATGAACAGAAGCTG
GCGGAAAGCAATGTGCAGGTGATTGGCCAAAATGCCCAAGGGGTAGCAATTCGCACCAAAGATTTAAACCAAGAAGAACG
GACGAAACTGACAGAAGCCCTCACTGCTAAATTGGGCCAGCTGGATGTCGAGAAATCTCAAATTGATACGGTCGGTCCAA
CCTTAGGAAAACAATTACTGGCATCGGGCTTATTAGCGCTGATCGTGTCCTTTGCGGCCATCATTGTTTATGTCAGTGTC
CGCTTCCAGTTTGACTATGCCCTGTTTGCCATTGTGGCTTTGTTCCACGATGTCCTCGTTACTATGGGTTTTTTCTCTAT
TTTGGGGTTAACCCGAGGGGTAGAGGTTAACAGCCTGTTTATTGTGGGTCTATTGACTATTATTGGTTTCTCAGTCAACG
ACACGGTGGTCATTTACGATCGCGTTCGGGAAAACCTCAAATATGGAGCGAAGCGCTCGATTAGTGAAACCGTCGATATT
GCCGTTAACCAGACCTTAGGCCGATCCATCAACACCTCCCTAACGACGGGGTTACCGCTGATCGGTATCTATATCTTTGG
TGGGGAAACCTTAAAGGATTTTGCTCTAACGCTGATCGTCGGATTTGCGGCAGGGGCCTATTCCAGTATTTTTATTGCCA
GTACCTTGTTGGCCTGGTGGCGTCAACGCCAGGAGCGCGGCGGTTACAATACGATGGATTCCAGCCCAGAAGAAATTTAG

Upstream 100 bases:

>100_bases
TGTTTACAGCCATTACCTGCAGCCGCACCCTGATGTTTACCGCCATTAGCCTTCCCAACCTCCGAAAAATTGAACTATTT
GATTCTAAAAGGGCAGTCTC

Downstream 100 bases:

>100_bases
CCCTATGAGTCAACCCCCTGGACGTTCAGACGGTGCTGTTCCAGAGCGGAACTCAGATCCTCAACTACAAGCTGAAATAC
AGCGGTTATTCCAACTGACT

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKLNLNQQRGLWWTISAALILAGVISMALSWNQYQAPLKPGLDFTGGTRLQLERDCSKPDNCKTPIQIAEVRQILDEQKL
AESNVQVIGQNAQGVAIRTKDLNQEERTKLTEALTAKLGQLDVEKSQIDTVGPTLGKQLLASGLLALIVSFAAIIVYVSV
RFQFDYALFAIVALFHDVLVTMGFFSILGLTRGVEVNSLFIVGLLTIIGFSVNDTVVIYDRVRENLKYGAKRSISETVDI
AVNQTLGRSINTSLTTGLPLIGIYIFGGETLKDFALTLIVGFAAGAYSSIFIASTLLAWWRQRQERGGYNTMDSSPEEI

Sequences:

>Translated_319_residues
MKLNLNQQRGLWWTISAALILAGVISMALSWNQYQAPLKPGLDFTGGTRLQLERDCSKPDNCKTPIQIAEVRQILDEQKL
AESNVQVIGQNAQGVAIRTKDLNQEERTKLTEALTAKLGQLDVEKSQIDTVGPTLGKQLLASGLLALIVSFAAIIVYVSV
RFQFDYALFAIVALFHDVLVTMGFFSILGLTRGVEVNSLFIVGLLTIIGFSVNDTVVIYDRVRENLKYGAKRSISETVDI
AVNQTLGRSINTSLTTGLPLIGIYIFGGETLKDFALTLIVGFAAGAYSSIFIASTLLAWWRQRQERGGYNTMDSSPEEI
>Mature_319_residues
MKLNLNQQRGLWWTISAALILAGVISMALSWNQYQAPLKPGLDFTGGTRLQLERDCSKPDNCKTPIQIAEVRQILDEQKL
AESNVQVIGQNAQGVAIRTKDLNQEERTKLTEALTAKLGQLDVEKSQIDTVGPTLGKQLLASGLLALIVSFAAIIVYVSV
RFQFDYALFAIVALFHDVLVTMGFFSILGLTRGVEVNSLFIVGLLTIIGFSVNDTVVIYDRVRENLKYGAKRSISETVDI
AVNQTLGRSINTSLTTGLPLIGIYIFGGETLKDFALTLIVGFAAGAYSSIFIASTLLAWWRQRQERGGYNTMDSSPEEI

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:
GO:0005622: Protein translocase subunit SecF
GO:0005886: Protein translocase subunit SecF
GO:0006810: Protein translocase subunit SecF
GO:0006886: Protein translocase subunit SecF
GO:0015031: Protein translocase subunit SecF
GO:0015450: Protein translocase subunit SecF
GO:0016020: Protein translocase subunit SecF
GO:0016021: Protein translocase subunit SecF
GO:0055085: Protein translocase subunit SecF

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=291, Percent_Identity=29.553264604811, Blast_Score=141, Evalue=6e-35,
Organism=Escherichia coli, GI1786609, Length=161, Percent_Identity=26.7080745341615, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35011; Mature: 35011

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNLNQQRGLWWTISAALILAGVISMALSWNQYQAPLKPGLDFTGGTRLQLERDCSKPD
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
NCKTPIQIAEVRQILDEQKLAESNVQVIGQNAQGVAIRTKDLNQEERTKLTEALTAKLGQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHC
LDVEKSQIDTVGPTLGKQLLASGLLALIVSFAAIIVYVSVRFQFDYALFAIVALFHDVLV
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
TMGFFSILGLTRGVEVNSLFIVGLLTIIGFSVNDTVVIYDRVRENLKYGAKRSISETVDI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHH
AVNQTLGRSINTSLTTGLPLIGIYIFGGETLKDFALTLIVGFAAGAYSSIFIASTLLAWW
HHHHHHCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRQERGGYNTMDSSPEEI
HHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLNLNQQRGLWWTISAALILAGVISMALSWNQYQAPLKPGLDFTGGTRLQLERDCSKPD
CCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
NCKTPIQIAEVRQILDEQKLAESNVQVIGQNAQGVAIRTKDLNQEERTKLTEALTAKLGQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHC
LDVEKSQIDTVGPTLGKQLLASGLLALIVSFAAIIVYVSVRFQFDYALFAIVALFHDVLV
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
TMGFFSILGLTRGVEVNSLFIVGLLTIIGFSVNDTVVIYDRVRENLKYGAKRSISETVDI
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHH
AVNQTLGRSINTSLTTGLPLIGIYIFGGETLKDFALTLIVGFAAGAYSSIFIASTLLAWW
HHHHHHCCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQRQERGGYNTMDSSPEEI
HHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]