| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333881
Identifier: 158333881
GI number: 158333881
Start: 672902
End: 674434
Strand: Direct
Name: 158333881
Synonym: AM1_0693
Alternate gene names: NA
Gene position: 672902-674434 (Clockwise)
Preceding gene: 158333879
Following gene: 158333886
Centisome position: 10.35
GC content: 51.01
Gene sequence:
>1533_bases ATGATTTGGATTTCCCTCTCTATCTTTGGACTGGTCCTGTATTTTATCGTTCATCACAGTGTTTCTCGGACCACAAATAC CCCTACGTGGCTGCTGTGGCTAGTGTTGATGATTCCAGCTTTAGTGGCTGGCGGTTGGGCTGCCGTCTATGGTGCGGATG TTAAACCACCGCCTCGACTGTGGATTCCCAGTACCATTTTTGCCCTGATTTCCTATCTATATTTAGCCCGCCCCAATAAA CGCAAGCCTGCCCCTCAATCCTCAGAAGCCCAAAATACCGAACCTGAGAATAGCCAGTCCGCTGAGGATTCTCCGAACAG GGAAGAGAAGCCCCCTAAGCCCATAGCAGCGGCGAATCTGTTAACCAAAGGCGAAGAGAGTCAACTCCAAAATTGCTTTC CCTGGTCTATTTTTTACTTGCAAAACGTGGACTATCGCCCCCAAGTCGTCATCTGCCGGGGCCAGTTGCGATCGCAACCG GAAAAAGCCTATCAAACCATCCGCGAAAACATCAAAACCCAGTTTGGCGATCGGTTTTTGGTGGTCTTTCAGGATGGGGC CATGAATAAGCCCTTTTTTATCCTGGTTCCCAATCCCCAAACCCAAGAAAAAGAAAAGCGGCGCGGCCCCGTCAGTCGAC CGGGATTGGCCTTAGGTCTATTCTTCTCCACCCTATTAACGACCACATTAGCCGGATTAAATTTTAGTGTCCCAGACCTG ACGCGCCAACTGCTCCGGGACCAGCCGCAACTGATTCTGCAGGGCTTACCCTATGCGTTGGCCTTGATGGCCATCTTAGG GATTCATGAACTAGGCCATTACTTTACCGCCCGGCGATACCGGATCAAAGCGACCCTGCCCTACTTTATCCCTGTGCCCA TTAGCTTTTTCCCCATCGGTACCTTAGGGGCCTTTATTCAGCAACGGTCTCCCGTCCCCAATCGCAAAGCGCTGTTTGAT GTGGGAATTGCGGGACCTCTAGCGGGACTGATGGTGACAATTCCCGTTTTATTTTGGGGGCTGATGAACTCGACGGTGGT GACCATCCCCGACAAGATTGAAGGCTTGCCCTTTGATGCCATGAATCCCACTTCTTCGATATTACTGTCCTTGTTCAGCA AATTGGCCATGGGGAGTGCATTGACTTTGGATAAGGGGATTGATTTGCATCCCGTTGCGATCGCAGGTTGGATCGGTATT ATTGCCACCGCCCTGAACCTGATGCCCATTGGGCAACTGGATGGTGGCCATATCGTCCATGCCATGTTTGGTCAGCGGAA CGGGGCCATCATCGGTCAAATCGCTCGATTGTTGGTGTTATTTCTTGCCTTTATCCAGCCCCCACTGCTGATCTGGGCCA TTATTCTGTTATTTATGCCCACGGTGGATCAGCCAGCCTTAAATGATGTCAGTGAGCTGGACAATAAGCGGGACCTGCTG GGGCTAATTTCCCTGGGCATTTTAGTGTTGATTATTCTGCCCTTGCCCCATAGTGTGGCCCATCTCCTTTTTGCCGCAAA CCCAATTCCATAG
Upstream 100 bases:
>100_bases TGGGAGGAAACCCATAAACAGACTCTAAAACCTGTCGTGGTTCTTTACTCACAGTAAGTCCCTTCCCTGGTGTCTTTGTC CCCGAGAATAACCTTTTTGC
Downstream 100 bases:
>100_bases GGGATGGGTACTCCCTTGCACTCGAATCCGCATCACCTGTTGGCTAAGGCGCTGGTACTCAGGTGCAGGAATGCCCCAGA GAATGACTCGACTTTGCCAC
Product: M50 family peptidase
Products: NA
Alternate protein names: Peptidase; Membrane-Associated Zn-Dependent Protease; M50 Family Peptidase; Metalloprotease; Zinc Protease; Membrane-Associated Metallopeptidase; Zinc Metalloprotease; M50 Family Metallopeptidase; M50B Family Peptidase; Peptidase Family; Membrane Associated Metalloprotease; S2P Family Metalloprotease; Integral Membrane Protease
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MIWISLSIFGLVLYFIVHHSVSRTTNTPTWLLWLVLMIPALVAGGWAAVYGADVKPPPRLWIPSTIFALISYLYLARPNK RKPAPQSSEAQNTEPENSQSAEDSPNREEKPPKPIAAANLLTKGEESQLQNCFPWSIFYLQNVDYRPQVVICRGQLRSQP EKAYQTIRENIKTQFGDRFLVVFQDGAMNKPFFILVPNPQTQEKEKRRGPVSRPGLALGLFFSTLLTTTLAGLNFSVPDL TRQLLRDQPQLILQGLPYALALMAILGIHELGHYFTARRYRIKATLPYFIPVPISFFPIGTLGAFIQQRSPVPNRKALFD VGIAGPLAGLMVTIPVLFWGLMNSTVVTIPDKIEGLPFDAMNPTSSILLSLFSKLAMGSALTLDKGIDLHPVAIAGWIGI IATALNLMPIGQLDGGHIVHAMFGQRNGAIIGQIARLLVLFLAFIQPPLLIWAIILLFMPTVDQPALNDVSELDNKRDLL GLISLGILVLIILPLPHSVAHLLFAANPIP
Sequences:
>Translated_510_residues MIWISLSIFGLVLYFIVHHSVSRTTNTPTWLLWLVLMIPALVAGGWAAVYGADVKPPPRLWIPSTIFALISYLYLARPNK RKPAPQSSEAQNTEPENSQSAEDSPNREEKPPKPIAAANLLTKGEESQLQNCFPWSIFYLQNVDYRPQVVICRGQLRSQP EKAYQTIRENIKTQFGDRFLVVFQDGAMNKPFFILVPNPQTQEKEKRRGPVSRPGLALGLFFSTLLTTTLAGLNFSVPDL TRQLLRDQPQLILQGLPYALALMAILGIHELGHYFTARRYRIKATLPYFIPVPISFFPIGTLGAFIQQRSPVPNRKALFD VGIAGPLAGLMVTIPVLFWGLMNSTVVTIPDKIEGLPFDAMNPTSSILLSLFSKLAMGSALTLDKGIDLHPVAIAGWIGI IATALNLMPIGQLDGGHIVHAMFGQRNGAIIGQIARLLVLFLAFIQPPLLIWAIILLFMPTVDQPALNDVSELDNKRDLL GLISLGILVLIILPLPHSVAHLLFAANPIP >Mature_510_residues MIWISLSIFGLVLYFIVHHSVSRTTNTPTWLLWLVLMIPALVAGGWAAVYGADVKPPPRLWIPSTIFALISYLYLARPNK RKPAPQSSEAQNTEPENSQSAEDSPNREEKPPKPIAAANLLTKGEESQLQNCFPWSIFYLQNVDYRPQVVICRGQLRSQP EKAYQTIRENIKTQFGDRFLVVFQDGAMNKPFFILVPNPQTQEKEKRRGPVSRPGLALGLFFSTLLTTTLAGLNFSVPDL TRQLLRDQPQLILQGLPYALALMAILGIHELGHYFTARRYRIKATLPYFIPVPISFFPIGTLGAFIQQRSPVPNRKALFD VGIAGPLAGLMVTIPVLFWGLMNSTVVTIPDKIEGLPFDAMNPTSSILLSLFSKLAMGSALTLDKGIDLHPVAIAGWIGI IATALNLMPIGQLDGGHIVHAMFGQRNGAIIGQIARLLVLFLAFIQPPLLIWAIILLFMPTVDQPALNDVSELDNKRDLL GLISLGILVLIILPLPHSVAHLLFAANPIP
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56309; Mature: 56309
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWISLSIFGLVLYFIVHHSVSRTTNTPTWLLWLVLMIPALVAGGWAAVYGADVKPPPRL CEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCC WIPSTIFALISYLYLARPNKRKPAPQSSEAQNTEPENSQSAEDSPNREEKPPKPIAAANL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LTKGEESQLQNCFPWSIFYLQNVDYRPQVVICRGQLRSQPEKAYQTIRENIKTQFGDRFL HCCCCHHHHHCCCCEEEEEEECCCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCEEE VVFQDGAMNKPFFILVPNPQTQEKEKRRGPVSRPGLALGLFFSTLLTTTLAGLNFSVPDL EEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH TRQLLRDQPQLILQGLPYALALMAILGIHELGHYFTARRYRIKATLPYFIPVPISFFPIG HHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCCCHH TLGAFIQQRSPVPNRKALFDVGIAGPLAGLMVTIPVLFWGLMNSTVVTIPDKIEGLPFDA HHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHCCCCCCCC MNPTSSILLSLFSKLAMGSALTLDKGIDLHPVAIAGWIGIIATALNLMPIGQLDGGHIVH CCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE AMFGQRNGAIIGQIARLLVLFLAFIQPPLLIWAIILLFMPTVDQPALNDVSELDNKRDLL EECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH GLISLGILVLIILPLPHSVAHLLFAANPIP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCC >Mature Secondary Structure MIWISLSIFGLVLYFIVHHSVSRTTNTPTWLLWLVLMIPALVAGGWAAVYGADVKPPPRL CEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCCCCCC WIPSTIFALISYLYLARPNKRKPAPQSSEAQNTEPENSQSAEDSPNREEKPPKPIAAANL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH LTKGEESQLQNCFPWSIFYLQNVDYRPQVVICRGQLRSQPEKAYQTIRENIKTQFGDRFL HCCCCHHHHHCCCCEEEEEEECCCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHCCCEEE VVFQDGAMNKPFFILVPNPQTQEKEKRRGPVSRPGLALGLFFSTLLTTTLAGLNFSVPDL EEEECCCCCCCEEEEECCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHH TRQLLRDQPQLILQGLPYALALMAILGIHELGHYFTARRYRIKATLPYFIPVPISFFPIG HHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCCCHH TLGAFIQQRSPVPNRKALFDVGIAGPLAGLMVTIPVLFWGLMNSTVVTIPDKIEGLPFDA HHHHHHHHCCCCCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHCCCCCCCC MNPTSSILLSLFSKLAMGSALTLDKGIDLHPVAIAGWIGIIATALNLMPIGQLDGGHIVH CCHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE AMFGQRNGAIIGQIARLLVLFLAFIQPPLLIWAIILLFMPTVDQPALNDVSELDNKRDLL EECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHH GLISLGILVLIILPLPHSVAHLLFAANPIP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA