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The map label for this gene is 158333849

Identifier: 158333849

GI number: 158333849

Start: 644241

End: 645080

Strand: Reverse

Name: 158333849

Synonym: AM1_0659

Alternate gene names: NA

Gene position: 645080-644241 (Counterclockwise)

Preceding gene: 158333850

Following gene: 158333847

Centisome position: 9.92

GC content: 48.21

Gene sequence:

>840_bases
ATGGCTAACTTCAGTCGAACCTGGTGGGGACAACGGTTCCTTACAGCAATTGAGCAAATTACCGATCCAGGGCGTTTGGG
GCGAGGACGATCCTATGCTCGGGGGAATAAAGTCAAAAGTTTTACTCTTAAAGATGGGTTGGTGAAAGCTGAAGTTCGCG
GCTCGGTGAATCCTTATTTTGGGGTTTATAAAGAGCCTTTGTATGAAACCAGCATTGAGTTTGAGCCGATTAGCAAAGCC
AATTGGGCAGCTGCGATCGCATTTATCGCATCCAAAGCCAGTCTGATCTCACGGCTGATGCTAAACGAAATGCCTGACAA
TATCGAAGATGCCTTTGCCAAGCTGGATTTAAACCTGCTACCCCGTAGCAATACAAATTTCAAGACTCAATGTTCTTGTC
CCGACTGGAGCAATCCCTGCAAACATATTGCTGGCGTCTATTACCTATTAGCTGCAGAGCTGGACCAAGACCCATTTTTG
CTGTTTGAGCTACGAGGTCTGTCTCGGGAAAACTTACAAAAGGAACTCGCGAAATCCCCCCTCGGTCAAGCATTATCCGC
TGAACTCACTGCCCAGCAAACAGAGCTGGAACCAGACACCAGCTATTACACCCAGCCCCTCACCACCCCCGCATCCGAGA
TCGAACAGCTCAAAGACTTTTGGCAAGGAGACAAACGACTTCCCCAAACCATTAATGCCCCACCCTCGACGGGAGTCTCT
GGGATTTTGGTTAAAACCCAAGGCGACTTTCCAGCCTTTTGGCCAAAGGAGCAATCCTTCCTAGCCGTTATGGAAGAATT
CTATGATCGGGTCAGAGATAAAAGTTCTGCTGTACTTTGA

Upstream 100 bases:

>100_bases
CAATTACCCATTACCTATCGAGAGAACCGCATTCTGAGTGATGAATTATTCCCTGAGCTAGAACTAACGGCCCAGGACGT
ATTTAGAGGAATAATCACCA

Downstream 100 bases:

>100_bases
TTTAGCAGACTCAATCACAAACTATCACAACAGATTCAATGCTCTTAGCCTCCATCAAAATGGGTTGGATCTTGCCAAAC
GGTTTGAATATGATTGAGAT

Product: SWIM zinc finger domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein; SWIM Zinc Finger Domain-Containing Protein; Zinc Finger SWIM-Type; SWIM Zinc Finger Domain Protein; Zinc Finger Protein; Swim Zinc Finger Domain Protein; Non-Specific Serine/Threonine Protein Kinase; SNF2 Family Helicase; Zinc Finger Domain-Containing Protein; SWIM Zinc Finger Containing Protein; Zinc Finger Swim Domain-Containing Protein; Helicase; SNF2-Related Protein; SWIM Zinc-Finger Protein; Swim Zn-Finger Containing Protein; Snf2 Family Protein; SWIM Zinc Finger-Containing Protein

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MANFSRTWWGQRFLTAIEQITDPGRLGRGRSYARGNKVKSFTLKDGLVKAEVRGSVNPYFGVYKEPLYETSIEFEPISKA
NWAAAIAFIASKASLISRLMLNEMPDNIEDAFAKLDLNLLPRSNTNFKTQCSCPDWSNPCKHIAGVYYLLAAELDQDPFL
LFELRGLSRENLQKELAKSPLGQALSAELTAQQTELEPDTSYYTQPLTTPASEIEQLKDFWQGDKRLPQTINAPPSTGVS
GILVKTQGDFPAFWPKEQSFLAVMEEFYDRVRDKSSAVL

Sequences:

>Translated_279_residues
MANFSRTWWGQRFLTAIEQITDPGRLGRGRSYARGNKVKSFTLKDGLVKAEVRGSVNPYFGVYKEPLYETSIEFEPISKA
NWAAAIAFIASKASLISRLMLNEMPDNIEDAFAKLDLNLLPRSNTNFKTQCSCPDWSNPCKHIAGVYYLLAAELDQDPFL
LFELRGLSRENLQKELAKSPLGQALSAELTAQQTELEPDTSYYTQPLTTPASEIEQLKDFWQGDKRLPQTINAPPSTGVS
GILVKTQGDFPAFWPKEQSFLAVMEEFYDRVRDKSSAVL
>Mature_278_residues
ANFSRTWWGQRFLTAIEQITDPGRLGRGRSYARGNKVKSFTLKDGLVKAEVRGSVNPYFGVYKEPLYETSIEFEPISKAN
WAAAIAFIASKASLISRLMLNEMPDNIEDAFAKLDLNLLPRSNTNFKTQCSCPDWSNPCKHIAGVYYLLAAELDQDPFLL
FELRGLSRENLQKELAKSPLGQALSAELTAQQTELEPDTSYYTQPLTTPASEIEQLKDFWQGDKRLPQTINAPPSTGVSG
ILVKTQGDFPAFWPKEQSFLAVMEEFYDRVRDKSSAVL

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31376; Mature: 31245

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFSRTWWGQRFLTAIEQITDPGRLGRGRSYARGNKVKSFTLKDGLVKAEVRGSVNPYF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCCCCCCC
GVYKEPLYETSIEFEPISKANWAAAIAFIASKASLISRLMLNEMPDNIEDAFAKLDLNLL
CCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEC
PRSNTNFKTQCSCPDWSNPCKHIAGVYYLLAAELDQDPFLLFELRGLSRENLQKELAKSP
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCH
LGQALSAELTAQQTELEPDTSYYTQPLTTPASEIEQLKDFWQGDKRLPQTINAPPSTGVS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GILVKTQGDFPAFWPKEQSFLAVMEEFYDRVRDKSSAVL
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ANFSRTWWGQRFLTAIEQITDPGRLGRGRSYARGNKVKSFTLKDGLVKAEVRGSVNPYF
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEHHCCCCCCCC
GVYKEPLYETSIEFEPISKANWAAAIAFIASKASLISRLMLNEMPDNIEDAFAKLDLNLL
CCHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEC
PRSNTNFKTQCSCPDWSNPCKHIAGVYYLLAAELDQDPFLLFELRGLSRENLQKELAKSP
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCH
LGQALSAELTAQQTELEPDTSYYTQPLTTPASEIEQLKDFWQGDKRLPQTINAPPSTGVS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
GILVKTQGDFPAFWPKEQSFLAVMEEFYDRVRDKSSAVL
EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA