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The map label for this gene is ccmK [H]

Identifier: 158333845

GI number: 158333845

Start: 641997

End: 642323

Strand: Reverse

Name: ccmK [H]

Synonym: AM1_0655

Alternate gene names: 158333845

Gene position: 642323-641997 (Counterclockwise)

Preceding gene: 158333846

Following gene: 158333835

Centisome position: 9.88

GC content: 52.91

Gene sequence:

>327_bases
ATGCCACAGGCAGTTGGGTCACTGGAAACGAAAGGATTCCCCCCCGTATTGGCGGCAGCAGATGCCATGGTCAAAGCTGG
GCGTGTGACCTTAGTTGGTTATATCCGAGCAGGGAGTGCTCGGTTTACGATCAATATTCGCGGGGATGTGTCTGAAGTCA
AAATGGCTATGGATGCTGGTGTGGCAGCAGCGGAGAAAACACCCGGTGGTGTTTTGGAGACTTGGGTGATTATTCCTCGT
CCCCATGAAAATGTGGAAGCGGTCATGGACATCGAATTCGGCGATGAGGTAGAAGAATTCCGCCGTGCCGTTGAAGGGCT
AGCCTAA

Upstream 100 bases:

>100_bases
TGCCGATTGATTACTCAGAACGTTCTGAACCCTTTCGAACGTGAATTAAGGGTTAGAACGAGCGCTAAGTTGTACATTAT
TATCTTTGAGGAAAGTCGGA

Downstream 100 bases:

>100_bases
TTCTGGGGGAGATTCAGCTTTCCTAGCTAGGAATTTTTAGTAGGTGTAAACAGATCATTTGCGATCGCAGTTCCTAATAG
CACCAATCCACATCCCACCC

Product: carbon dioxide concentrating mechanism protein CcmK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPQAVGSLETKGFPPVLAAADAMVKAGRVTLVGYIRAGSARFTINIRGDVSEVKMAMDAGVAAAEKTPGGVLETWVIIPR
PHENVEAVMDIEFGDEVEEFRRAVEGLA

Sequences:

>Translated_108_residues
MPQAVGSLETKGFPPVLAAADAMVKAGRVTLVGYIRAGSARFTINIRGDVSEVKMAMDAGVAAAEKTPGGVLETWVIIPR
PHENVEAVMDIEFGDEVEEFRRAVEGLA
>Mature_107_residues
PQAVGSLETKGFPPVLAAADAMVKAGRVTLVGYIRAGSARFTINIRGDVSEVKMAMDAGVAAAEKTPGGVLETWVIIPRP
HENVEAVMDIEFGDEVEEFRRAVEGLA

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=89, Percent_Identity=46.0674157303371, Blast_Score=59, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 11454; Mature: 11323

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAVGSLETKGFPPVLAAADAMVKAGRVTLVGYIRAGSARFTINIRGDVSEVKMAMDAG
CCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHCC
VAAAEKTPGGVLETWVIIPRPHENVEAVMDIEFGDEVEEFRRAVEGLA
CCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PQAVGSLETKGFPPVLAAADAMVKAGRVTLVGYIRAGSARFTINIRGDVSEVKMAMDAG
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHCC
VAAAEKTPGGVLETWVIIPRPHENVEAVMDIEFGDEVEEFRRAVEGLA
CCCCCCCCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]