| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333733
Identifier: 158333733
GI number: 158333733
Start: 522709
End: 523521
Strand: Reverse
Name: 158333733
Synonym: AM1_0541
Alternate gene names: NA
Gene position: 523521-522709 (Counterclockwise)
Preceding gene: 158333734
Following gene: 158333732
Centisome position: 8.05
GC content: 49.08
Gene sequence:
>813_bases ATGGCGAAACGTATTAACCAATCCCAAATGATGAAGGCAACGGATGCCTCTTCCATGTCTAGTATGCTGACCAGTGCAGG TTTACAAGCTTCGGACTGGAGTAACCCCGTACTTTACTTAGAAATTCCCATCACCTCCCAGGTTCCAGATATTTGTCCTG CTGGAGGTCCTAATGCAGGTTCACCTCCACCTCAACCCGCGACCTATGATCAGGTCGTGTATGACATCCGCCCCAGTACC CAAGACTGGCTTGCCCCCAACTCCATTCACCGGTATGGTCGTGTTCCCGCCAGTGATGGCAGTATCAATCCCTGTAGTAA CCCCGTTGCTAGCGATACCTTAGTGGATGCGATCGCAGCGGAAATCGATAACACCCCCACCTGTCCTACACCAGGGGTAA TGATGGGGAAAGGGGGGTTTCAAGCCTGTGTACAGGGCAGTCAAGTTAATCTAATTATGCGTAGCCAAATCTCCGATGTA GAAATTCATCGATTGAGCAGTACTGCAACGTCCCGCACAGGAACTAGCCAACCTAGCCCTGTTTTAACCGCTACTCAACA ACCTGGCACCAACCAGATCGAGTTAAATTGGCAGTGGTCCGGTGCTCTAAGTGGCGTCACTTTTGAAGTGAATCAGGAAA TTCCTTCCACGTCCCAGAAGTCCAAAATTTACACTGGTTCAGACAGTCGTAACTCAACCGAAATGCAAGGATTGGCTGGA GAACAACATTGCTATACAGTCACCGCAAAGGTGGGGCAAATCAGCAGTCCTGAAAGCAATAAAGTTTGCTTTACTCCAGT CACGGTTTATTAA
Upstream 100 bases:
>100_bases AGTGATTGCAGCAACCCGAGCCAACAACCGGACTGAAGCGATTGCGGCTTGACGCCACGACTTAAGCCGAGCTTTCGATT TCATTAGCAATGAAATTAGG
Downstream 100 bases:
>100_bases ACTGGATTCTACTGTTTTTATTTAGATTAATTTTTAACTACATAGGGCTTGCTTCGGAAGTCTAAGTTCCAATATTTGCA GTGTATCCAAGTGTTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MAKRINQSQMMKATDASSMSSMLTSAGLQASDWSNPVLYLEIPITSQVPDICPAGGPNAGSPPPQPATYDQVVYDIRPST QDWLAPNSIHRYGRVPASDGSINPCSNPVASDTLVDAIAAEIDNTPTCPTPGVMMGKGGFQACVQGSQVNLIMRSQISDV EIHRLSSTATSRTGTSQPSPVLTATQQPGTNQIELNWQWSGALSGVTFEVNQEIPSTSQKSKIYTGSDSRNSTEMQGLAG EQHCYTVTAKVGQISSPESNKVCFTPVTVY
Sequences:
>Translated_270_residues MAKRINQSQMMKATDASSMSSMLTSAGLQASDWSNPVLYLEIPITSQVPDICPAGGPNAGSPPPQPATYDQVVYDIRPST QDWLAPNSIHRYGRVPASDGSINPCSNPVASDTLVDAIAAEIDNTPTCPTPGVMMGKGGFQACVQGSQVNLIMRSQISDV EIHRLSSTATSRTGTSQPSPVLTATQQPGTNQIELNWQWSGALSGVTFEVNQEIPSTSQKSKIYTGSDSRNSTEMQGLAG EQHCYTVTAKVGQISSPESNKVCFTPVTVY >Mature_269_residues AKRINQSQMMKATDASSMSSMLTSAGLQASDWSNPVLYLEIPITSQVPDICPAGGPNAGSPPPQPATYDQVVYDIRPSTQ DWLAPNSIHRYGRVPASDGSINPCSNPVASDTLVDAIAAEIDNTPTCPTPGVMMGKGGFQACVQGSQVNLIMRSQISDVE IHRLSSTATSRTGTSQPSPVLTATQQPGTNQIELNWQWSGALSGVTFEVNQEIPSTSQKSKIYTGSDSRNSTEMQGLAGE QHCYTVTAKVGQISSPESNKVCFTPVTVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28687; Mature: 28556
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRINQSQMMKATDASSMSSMLTSAGLQASDWSNPVLYLEIPITSQVPDICPAGGPNAG CCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC SPPPQPATYDQVVYDIRPSTQDWLAPNSIHRYGRVPASDGSINPCSNPVASDTLVDAIAA CCCCCCCCHHHEEEECCCCCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH EIDNTPTCPTPGVMMGKGGFQACVQGSQVNLIMRSQISDVEIHRLSSTATSRTGTSQPSP HHCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC VLTATQQPGTNQIELNWQWSGALSGVTFEVNQEIPSTSQKSKIYTGSDSRNSTEMQGLAG EEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHCCCC EQHCYTVTAKVGQISSPESNKVCFTPVTVY CCEEEEEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure AKRINQSQMMKATDASSMSSMLTSAGLQASDWSNPVLYLEIPITSQVPDICPAGGPNAG CCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC SPPPQPATYDQVVYDIRPSTQDWLAPNSIHRYGRVPASDGSINPCSNPVASDTLVDAIAA CCCCCCCCHHHEEEECCCCCHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH EIDNTPTCPTPGVMMGKGGFQACVQGSQVNLIMRSQISDVEIHRLSSTATSRTGTSQPSP HHCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCC VLTATQQPGTNQIELNWQWSGALSGVTFEVNQEIPSTSQKSKIYTGSDSRNSTEMQGLAG EEEECCCCCCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCHHHHCCCC EQHCYTVTAKVGQISSPESNKVCFTPVTVY CCEEEEEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA