Click here to switch to the map view.

The map label for this gene is chlD [H]

Identifier: 158333727

GI number: 158333727

Start: 513298

End: 515346

Strand: Reverse

Name: chlD [H]

Synonym: AM1_0533

Alternate gene names: 158333727

Gene position: 515346-513298 (Counterclockwise)

Preceding gene: 158333728

Following gene: 158333724

Centisome position: 7.92

GC content: 51.15

Gene sequence:

>2049_bases
ATGCCAGTTGCTGAACTTCCCCAAAAAATAACCACCTTTCCCCTCACAGCTGTGGTGGGTCAAGAAGCGATTAAATTGGC
ATTATTGCTCACAGCAGTTGATCCAACTCTGGGCGGGGTCGTTATTGCGGGTCGGCGAGGGACCGCGAAATCAGTCATGG
CCCGAGCGGTTCATGCCCTTCTCCCCCCCATCGAAGTGGTCAAAGGCTCCATCTGCCAAGGCGATCCAGAGGATACTTCT
GCTTGGGATGATGACCTATTGGCCAGTCTAGAGGCTGGTGCCATTCCGATAGTGGATGGACAGCCCCAACCCGAAACCGA
AATTATTCCGACCCCATTTGTCCAGGTTCCTTTAGGAGTGACAGAAGATCGGCTGTTAGGTTCTGTGGATGTTAGCCAAT
CCGTAAAGCTAGGAGAAACCGTATTTCAACCCGGACTGTTGGCAGAGGCCAATCGGGGCGTCTTATATGTGGATGAGATT
AATCTACTGGATGACCAGATTTCCAATTTATTGCTGACTAGCCTAACGGAAGGTCGAAATCAAATCGAACGCGAGGGGCT
CAGCTTCCAACATCCTTGCTCTACTATTTTTATTGCCACTTACAATCCAGAAGAAGGTCCTCTACGGGAACATCTGCTAG
ATCGTATCGCTATTTCCCTCTCAGCCGATCAGATGTTGGGCCTTGACCTGCGAGTTCAGGCAGTGGAGCAGGCTACTGCC
TATGCCAATTCTCCTCAAGCATTTTTAGCACAGTATGAGGATGAAACAGATGATTTAAAAACTCAGATTTTGCTGGCGCG
AGAATGGCTCAAGGATGTTCAGATTCAACACTCTCAGATTGTCTATCTTGTGGATGAAGCTCTCAGAGGCGGAGTGCAAG
GTCATCGAGCCGAACTATTTGCCGTTCGTGTAGCCAAAGCCCATGCGGCCCTCAATGGCCGTTCAGAAGTCACTGCAGAA
GATTTACGGCGTGCTGTTGAATTAGTGATTGTCCCTCGGGCAACGGTCATTGATGCCCCACCCCCAGAACAACCACAACC
CCCACCTCCCCCTCCACCTCAACAAGATAATTCCGATCAGTCAGATCAAGATGAAGAAGAAGAGGACGATCAAAACGAAG
AAGATCCACCGGAACCAGAAGAGCCCCCCAGCATTCCCGAAGAATTTGTGTTCGATCCCGATGGTGTTGTCCTCGATCCC
CAAGTCTTATACTTTGCCCAAAATGCTAGCCGACAAGGGAAATCAGGTAGTCGGAGTATTGTCTTTTCGGAAGATCGAGG
ACGCTATGTCAAACCCATGTTGCCCAAGGGCGGTGTTAAACGAATTGCTGTTGACGCCACGTTGAGAGCGGCAGCTCCCT
ACCAAAAGGCACGGCGGTTGCGCCACCCGAATCGGCGAGTCATTGTTGAGCAGTCCGATGTCCGCACCAAACGGTTGGCT
CGTAAAGCAGGAGCATTGGTCGTGTTTGTAGTGGATGCGTCAGGTTCTATGGCCCTTAACCGGATGCAGTCGGCGAAAGG
GGCCGTGATGCGCTTATTAACGGAAGCCTATCAAAATCGAGATCAGGTTTCTTTGATCCCTTTTAGAGGGGAACGGGCTG
ATGTACTCCTACCCCCGACTCGGTCTATCGAAGCCGCTCGCCGCCGTTTGGATACGCTGCCCTGTGGCGGTGGATCTCCT
TTAGCCCACGGCTTGACCCAAGCGGTTCGGGTGGGGATGAATGCCCTCTCATCCGGGGATATTGGTCAGGTGGTATTGGT
CGCGATTACGGATGGTCGAGGTAATATTCCCTTGACAACATCCTTGGGTGAACCGCCAGTAGATGGGGAGAAACCTGATA
TTAAGGCTGAACTGTTAGAAATTGCGGGTCGCATTCGAGCCTTGAATTTGAAATTGCTGGTGATTGATACCGAGAACAAG
TTTATTTCCACTGGATTTGCCAAAGAGCTGGCCCAAAATGCAGGGGGTAACTACTATCATTTGCCGAAAGCCACCGATCA
AGCGATTGCCGCAGTCACCCAAGATGCCATCAGCAACTTGACGGGTTAG

Upstream 100 bases:

>100_bases
TCCGTTGAGATGAGGTAATGGGGCAGACAAAATCCTGAAACAACGCCTTTGAAGCATGGATCTTGGTATTCTGAAGGTCT
GAACACCAATGAAATCTTCT

Downstream 100 bases:

>100_bases
GCCTAGCTTATGACGGCTCTGGAGCGTTACTTCGAAGAATGATTTGTTGATCTTTAATCGCAATTAGCTCAATGGCTAGT
GGACCTGCGGTCAGTACTGT

Product: magnesium protoporphyrin IX chelatase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 682; Mature: 681

Protein sequence:

>682_residues
MPVAELPQKITTFPLTAVVGQEAIKLALLLTAVDPTLGGVVIAGRRGTAKSVMARAVHALLPPIEVVKGSICQGDPEDTS
AWDDDLLASLEAGAIPIVDGQPQPETEIIPTPFVQVPLGVTEDRLLGSVDVSQSVKLGETVFQPGLLAEANRGVLYVDEI
NLLDDQISNLLLTSLTEGRNQIEREGLSFQHPCSTIFIATYNPEEGPLREHLLDRIAISLSADQMLGLDLRVQAVEQATA
YANSPQAFLAQYEDETDDLKTQILLAREWLKDVQIQHSQIVYLVDEALRGGVQGHRAELFAVRVAKAHAALNGRSEVTAE
DLRRAVELVIVPRATVIDAPPPEQPQPPPPPPPQQDNSDQSDQDEEEEDDQNEEDPPEPEEPPSIPEEFVFDPDGVVLDP
QVLYFAQNASRQGKSGSRSIVFSEDRGRYVKPMLPKGGVKRIAVDATLRAAAPYQKARRLRHPNRRVIVEQSDVRTKRLA
RKAGALVVFVVDASGSMALNRMQSAKGAVMRLLTEAYQNRDQVSLIPFRGERADVLLPPTRSIEAARRRLDTLPCGGGSP
LAHGLTQAVRVGMNALSSGDIGQVVLVAITDGRGNIPLTTSLGEPPVDGEKPDIKAELLEIAGRIRALNLKLLVIDTENK
FISTGFAKELAQNAGGNYYHLPKATDQAIAAVTQDAISNLTG

Sequences:

>Translated_682_residues
MPVAELPQKITTFPLTAVVGQEAIKLALLLTAVDPTLGGVVIAGRRGTAKSVMARAVHALLPPIEVVKGSICQGDPEDTS
AWDDDLLASLEAGAIPIVDGQPQPETEIIPTPFVQVPLGVTEDRLLGSVDVSQSVKLGETVFQPGLLAEANRGVLYVDEI
NLLDDQISNLLLTSLTEGRNQIEREGLSFQHPCSTIFIATYNPEEGPLREHLLDRIAISLSADQMLGLDLRVQAVEQATA
YANSPQAFLAQYEDETDDLKTQILLAREWLKDVQIQHSQIVYLVDEALRGGVQGHRAELFAVRVAKAHAALNGRSEVTAE
DLRRAVELVIVPRATVIDAPPPEQPQPPPPPPPQQDNSDQSDQDEEEEDDQNEEDPPEPEEPPSIPEEFVFDPDGVVLDP
QVLYFAQNASRQGKSGSRSIVFSEDRGRYVKPMLPKGGVKRIAVDATLRAAAPYQKARRLRHPNRRVIVEQSDVRTKRLA
RKAGALVVFVVDASGSMALNRMQSAKGAVMRLLTEAYQNRDQVSLIPFRGERADVLLPPTRSIEAARRRLDTLPCGGGSP
LAHGLTQAVRVGMNALSSGDIGQVVLVAITDGRGNIPLTTSLGEPPVDGEKPDIKAELLEIAGRIRALNLKLLVIDTENK
FISTGFAKELAQNAGGNYYHLPKATDQAIAAVTQDAISNLTG
>Mature_681_residues
PVAELPQKITTFPLTAVVGQEAIKLALLLTAVDPTLGGVVIAGRRGTAKSVMARAVHALLPPIEVVKGSICQGDPEDTSA
WDDDLLASLEAGAIPIVDGQPQPETEIIPTPFVQVPLGVTEDRLLGSVDVSQSVKLGETVFQPGLLAEANRGVLYVDEIN
LLDDQISNLLLTSLTEGRNQIEREGLSFQHPCSTIFIATYNPEEGPLREHLLDRIAISLSADQMLGLDLRVQAVEQATAY
ANSPQAFLAQYEDETDDLKTQILLAREWLKDVQIQHSQIVYLVDEALRGGVQGHRAELFAVRVAKAHAALNGRSEVTAED
LRRAVELVIVPRATVIDAPPPEQPQPPPPPPPQQDNSDQSDQDEEEEDDQNEEDPPEPEEPPSIPEEFVFDPDGVVLDPQ
VLYFAQNASRQGKSGSRSIVFSEDRGRYVKPMLPKGGVKRIAVDATLRAAAPYQKARRLRHPNRRVIVEQSDVRTKRLAR
KAGALVVFVVDASGSMALNRMQSAKGAVMRLLTEAYQNRDQVSLIPFRGERADVLLPPTRSIEAARRRLDTLPCGGGSPL
AHGLTQAVRVGMNALSSGDIGQVVLVAITDGRGNIPLTTSLGEPPVDGEKPDIKAELLEIAGRIRALNLKLLVIDTENKF
ISTGFAKELAQNAGGNYYHLPKATDQAIAAVTQDAISNLTG

Specific function: Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 73809; Mature: 73677

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVAELPQKITTFPLTAVVGQEAIKLALLLTAVDPTLGGVVIAGRRGTAKSVMARAVHAL
CCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH
LPPIEVVKGSICQGDPEDTSAWDDDLLASLEAGAIPIVDGQPQPETEIIPTPFVQVPLGV
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCCC
TEDRLLGSVDVSQSVKLGETVFQPGLLAEANRGVLYVDEINLLDDQISNLLLTSLTEGRN
CHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
QIEREGLSFQHPCSTIFIATYNPEEGPLREHLLDRIAISLSADQMLGLDLRVQAVEQATA
HHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEECHHHHCCCCHHHHHHHHHHH
YANSPQAFLAQYEDETDDLKTQILLAREWLKDVQIQHSQIVYLVDEALRGGVQGHRAELF
HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHEE
AVRVAKAHAALNGRSEVTAEDLRRAVELVIVPRATVIDAPPPEQPQPPPPPPPQQDNSDQ
EEHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
SDQDEEEEDDQNEEDPPEPEEPPSIPEEFVFDPDGVVLDPQVLYFAQNASRQGKSGSRSI
CCCCCCHHCCCCCCCCCCCCCCCCCCHHHEECCCCEEECCEEEEEECCCCCCCCCCCCEE
VFSEDRGRYVKPMLPKGGVKRIAVDATLRAAAPYQKARRLRHPNRRVIVEQSDVRTKRLA
EEECCCCCEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHH
RKAGALVVFVVDASGSMALNRMQSAKGAVMRLLTEAYQNRDQVSLIPFRGERADVLLPPT
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCC
RSIEAARRRLDTLPCGGGSPLAHGLTQAVRVGMNALSSGDIGQVVLVAITDGRGNIPLTT
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEE
SLGEPPVDGEKPDIKAELLEIAGRIRALNLKLLVIDTENKFISTGFAKELAQNAGGNYYH
CCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEEEEECCCCEEHHHHHHHHHHHCCCCEEE
LPKATDQAIAAVTQDAISNLTG
CCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVAELPQKITTFPLTAVVGQEAIKLALLLTAVDPTLGGVVIAGRRGTAKSVMARAVHAL
CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHH
LPPIEVVKGSICQGDPEDTSAWDDDLLASLEAGAIPIVDGQPQPETEIIPTPFVQVPLGV
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEECCCC
TEDRLLGSVDVSQSVKLGETVFQPGLLAEANRGVLYVDEINLLDDQISNLLLTSLTEGRN
CHHHHCCCCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
QIEREGLSFQHPCSTIFIATYNPEEGPLREHLLDRIAISLSADQMLGLDLRVQAVEQATA
HHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEECHHHHCCCCHHHHHHHHHHH
YANSPQAFLAQYEDETDDLKTQILLAREWLKDVQIQHSQIVYLVDEALRGGVQGHRAELF
HCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHEE
AVRVAKAHAALNGRSEVTAEDLRRAVELVIVPRATVIDAPPPEQPQPPPPPPPQQDNSDQ
EEHHHHHHHHCCCCCCCCHHHHHHHHEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCC
SDQDEEEEDDQNEEDPPEPEEPPSIPEEFVFDPDGVVLDPQVLYFAQNASRQGKSGSRSI
CCCCCCHHCCCCCCCCCCCCCCCCCCHHHEECCCCEEECCEEEEEECCCCCCCCCCCCEE
VFSEDRGRYVKPMLPKGGVKRIAVDATLRAAAPYQKARRLRHPNRRVIVEQSDVRTKRLA
EEECCCCCEECCCCCCCCCEEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHH
RKAGALVVFVVDASGSMALNRMQSAKGAVMRLLTEAYQNRDQVSLIPFRGERADVLLPPT
HHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCC
RSIEAARRRLDTLPCGGGSPLAHGLTQAVRVGMNALSSGDIGQVVLVAITDGRGNIPLTT
CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEE
SLGEPPVDGEKPDIKAELLEIAGRIRALNLKLLVIDTENKFISTGFAKELAQNAGGNYYH
CCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEEEEECCCCEEHHHHHHHHHHHCCCCEEE
LPKATDQAIAAVTQDAISNLTG
CCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8663186; 8905231 [H]