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The map label for this gene is psbO [H]

Identifier: 158333720

GI number: 158333720

Start: 502849

End: 503652

Strand: Reverse

Name: psbO [H]

Synonym: AM1_0526

Alternate gene names: 158333720

Gene position: 503652-502849 (Counterclockwise)

Preceding gene: 158333722

Following gene: 158333719

Centisome position: 7.74

GC content: 48.38

Gene sequence:

>804_bases
ATGAGATTTCGCACTTTAATCGTTACTTTTTTAGCGGTCTGTCTGGGGGTTTTCTCAGTCAACGCCAAAGCTTTGGCAGT
TGTACCCAGCTCTATGACCTACGACCAGGTAAAAGGCACTGGTCTGGCTGATAGCTGCCCAACCCTTCCTACAGGCACCG
GTGACACCATATCAGTCGGAGGCTCTGCCTACATTACAGATTTGTGTTTCCAACCCACTTCTTTCTTCGTGAAAGAAGAG
CCTAAGAACCCTCGCCAAGAGGCCGAATTCGTGCCTGCGAGCGTTATGACTCGGAAAACAACGACCCTTGAGCAGATTGA
AGGACCTTTATCTGCTGATGGCGGCGGTTTAACGTTCAAAGAAAAAGACGGTATGGATTTCCAAGCTATTACCGTACAAA
TTTCTGGCCGTGAACGGGTACCCATGCTGTTCACCGTCAAGGAGCTTCTAGCTTCTGCCTCCGGTAGCTCCATCGCTGAC
GGAACTAGCTTCTCTGGAGAGTATGCTGTTCCTTCATACCGAACTTCAGGTTTCTTAGATCCCAAAGGTCGGGGTGTTTC
CACAGGTTATGACAATGCTGTCGCACTACCTGCTTCTGCAGATGCTGACAAGCTAAACCGAGCCAATGCCAAGCGCTTTG
ACCTCACCAAAGGTAGTATCTCCATGGATGTTGCTTCTGTTGATAGCGAAACTGGAGAATTTGGTGGCACCTTCGAAAGC
GAACAGTTTTCAGATAGTGACTTAGGTGCTATTGACCCCTTAGAAGTGAAAGTCCGTGGAATTTTCTATGGTCGTGTCAA
CTAA

Upstream 100 bases:

>100_bases
TGTTGGCTCTAAAGCTAAAAGTCTTACCAAACATGGTCATCAGTGCCTTGATGGCAATCTGGCAAGAATTAACATAACTT
TTGATACTAGAGGGTGATCA

Downstream 100 bases:

>100_bases
GAGATTCTATTAACTTGAACATTGAGGGTTATTCTGTAACCTAAAATATACATTCAAAAAGCAGGTGTGTTTTAATCAAA
CGCACCTGCTTTTTTATGTC

Product: photosystem II manganese-stabilizing protein PsbO

Products: NA

Alternate protein names: MSP [H]

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MRFRTLIVTFLAVCLGVFSVNAKALAVVPSSMTYDQVKGTGLADSCPTLPTGTGDTISVGGSAYITDLCFQPTSFFVKEE
PKNPRQEAEFVPASVMTRKTTTLEQIEGPLSADGGGLTFKEKDGMDFQAITVQISGRERVPMLFTVKELLASASGSSIAD
GTSFSGEYAVPSYRTSGFLDPKGRGVSTGYDNAVALPASADADKLNRANAKRFDLTKGSISMDVASVDSETGEFGGTFES
EQFSDSDLGAIDPLEVKVRGIFYGRVN

Sequences:

>Translated_267_residues
MRFRTLIVTFLAVCLGVFSVNAKALAVVPSSMTYDQVKGTGLADSCPTLPTGTGDTISVGGSAYITDLCFQPTSFFVKEE
PKNPRQEAEFVPASVMTRKTTTLEQIEGPLSADGGGLTFKEKDGMDFQAITVQISGRERVPMLFTVKELLASASGSSIAD
GTSFSGEYAVPSYRTSGFLDPKGRGVSTGYDNAVALPASADADKLNRANAKRFDLTKGSISMDVASVDSETGEFGGTFES
EQFSDSDLGAIDPLEVKVRGIFYGRVN
>Mature_267_residues
MRFRTLIVTFLAVCLGVFSVNAKALAVVPSSMTYDQVKGTGLADSCPTLPTGTGDTISVGGSAYITDLCFQPTSFFVKEE
PKNPRQEAEFVPASVMTRKTTTLEQIEGPLSADGGGLTFKEKDGMDFQAITVQISGRERVPMLFTVKELLASASGSSIAD
GTSFSGEYAVPSYRTSGFLDPKGRGVSTGYDNAVALPASADADKLNRANAKRFDLTKGSISMDVASVDSETGEFGGTFES
EQFSDSDLGAIDPLEVKVRGIFYGRVN

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002628 [H]

Pfam domain/function: PF01716 MSP [H]

EC number: NA

Molecular weight: Translated: 28303; Mature: 28303

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFRTLIVTFLAVCLGVFSVNAKALAVVPSSMTYDQVKGTGLADSCPTLPTGTGDTISVG
CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC
GSAYITDLCFQPTSFFVKEEPKNPRQEAEFVPASVMTRKTTTLEQIEGPLSADGGGLTFK
CCEEEEHHHCCCCCEEEECCCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCCCCCCCEEEE
EKDGMDFQAITVQISGRERVPMLFTVKELLASASGSSIADGTSFSGEYAVPSYRTSGFLD
CCCCCCEEEEEEEECCCCCCCHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKGRGVSTGYDNAVALPASADADKLNRANAKRFDLTKGSISMDVASVDSETGEFGGTFES
CCCCCCCCCCCCEEEECCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCC
EQFSDSDLGAIDPLEVKVRGIFYGRVN
CCCCCCCCCCCCCEEEEEEEEEEEECC
>Mature Secondary Structure
MRFRTLIVTFLAVCLGVFSVNAKALAVVPSSMTYDQVKGTGLADSCPTLPTGTGDTISVG
CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEC
GSAYITDLCFQPTSFFVKEEPKNPRQEAEFVPASVMTRKTTTLEQIEGPLSADGGGLTFK
CCEEEEHHHCCCCCEEEECCCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCCCCCCCEEEE
EKDGMDFQAITVQISGRERVPMLFTVKELLASASGSSIADGTSFSGEYAVPSYRTSGFLD
CCCCCCEEEEEEEECCCCCCCHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PKGRGVSTGYDNAVALPASADADKLNRANAKRFDLTKGSISMDVASVDSETGEFGGTFES
CCCCCCCCCCCCEEEECCCCCHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCC
EQFSDSDLGAIDPLEVKVRGIFYGRVN
CCCCCCCCCCCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8448216 [H]