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The map label for this gene is insF7 [C]

Identifier: 158333690

GI number: 158333690

Start: 471875

End: 472516

Strand: Reverse

Name: insF7 [C]

Synonym: AM1_0495

Alternate gene names: 158333690

Gene position: 472516-471875 (Counterclockwise)

Preceding gene: 158333692

Following gene: 158333689

Centisome position: 7.27

GC content: 48.13

Gene sequence:

>642_bases
GTGGCTCGACTAATGCGACAGATAGGGATTATGGCCAAGACCAAAGTCAAACGCAAACGCACCACCAATAGCGAACATTC
GTTCCCTCGCTATGGCAATCGAGTGTTGAATCTCTCCATCGACCATCCTGAGCAGGTGTGGGTGGCGGACATCACGTACA
TTCGCTTACAGCAGGAGTTTGTCTATTTGGCCGTCGTGATGGATGTCTTTACTCGCGCCATTCGTGGCTGGCATCTGTCC
CGCCATATCGACCAGCAACTAACGTTGAGGGCGTTGAACAAGGCGTTGGAGCGGGCAACGCCTGAGATTCACCATTCTGA
CCAAGGGGTTCAGTATGCCGCTGCAGCCTATATGCAATTGCTCCAACAACACCAAGTGCAAATCAGTATGGCCGAGGTGG
GACAGGCTTGGCAAAATGGCTATGCTGAGCGATTGATGAGAACGATAAAAGAAGAAGAGGTCGATTTATCAGACTATCGA
AATTTTACTGAAGCGTATGAGCACATTGAGCAGTTTCTAGAAGATGTGTATATGCATAAGCGGATTCATTCATCACTGGG
GTATTTGACACCCTGTGAATATGAGCAGCAGTGGAGACAACAGAACAATCACTATTGTATGAATAAGGAGGATAGCGCTT
AA

Upstream 100 bases:

>100_bases
TGATGATTCATTGACCTTAAAGCAGTCGGTGTACTTCATTGACTGCTTTTCTCGTTTGCTTTAGTCCAAACTCAAGGGGT
ATTGCGTTAACCATAAACGC

Downstream 100 bases:

>100_bases
TTCATCTATTGCCCTGTCCGAATATAGGGGTTCACTTCAAATTATGATTTATCACACATCGTCCTCTCAGCCGTCAAATG
TATCTCAAAGCCTGTTGGGT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MARLMRQIGIMAKTKVKRKRTTNSEHSFPRYGNRVLNLSIDHPEQVWVADITYIRLQQEFVYLAVVMDVFTRAIRGWHLS
RHIDQQLTLRALNKALERATPEIHHSDQGVQYAAAAYMQLLQQHQVQISMAEVGQAWQNGYAERLMRTIKEEEVDLSDYR
NFTEAYEHIEQFLEDVYMHKRIHSSLGYLTPCEYEQQWRQQNNHYCMNKEDSA

Sequences:

>Translated_213_residues
MARLMRQIGIMAKTKVKRKRTTNSEHSFPRYGNRVLNLSIDHPEQVWVADITYIRLQQEFVYLAVVMDVFTRAIRGWHLS
RHIDQQLTLRALNKALERATPEIHHSDQGVQYAAAAYMQLLQQHQVQISMAEVGQAWQNGYAERLMRTIKEEEVDLSDYR
NFTEAYEHIEQFLEDVYMHKRIHSSLGYLTPCEYEQQWRQQNNHYCMNKEDSA
>Mature_212_residues
ARLMRQIGIMAKTKVKRKRTTNSEHSFPRYGNRVLNLSIDHPEQVWVADITYIRLQQEFVYLAVVMDVFTRAIRGWHLSR
HIDQQLTLRALNKALERATPEIHHSDQGVQYAAAAYMQLLQQHQVQISMAEVGQAWQNGYAERLMRTIKEEEVDLSDYRN
FTEAYEHIEQFLEDVYMHKRIHSSLGYLTPCEYEQQWRQQNNHYCMNKEDSA

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=184, Percent_Identity=35.8695652173913, Blast_Score=110, Evalue=8e-25,
Organism=Escherichia coli, GI1788405, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1787263, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1786753, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1786570, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1786490, Length=201, Percent_Identity=30.8457711442786, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1789981, Length=200, Percent_Identity=30, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25302; Mature: 25171

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLMRQIGIMAKTKVKRKRTTNSEHSFPRYGNRVLNLSIDHPEQVWVADITYIRLQQEF
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VYLAVVMDVFTRAIRGWHLSRHIDQQLTLRALNKALERATPEIHHSDQGVQYAAAAYMQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LQQHQVQISMAEVGQAWQNGYAERLMRTIKEEEVDLSDYRNFTEAYEHIEQFLEDVYMHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIHSSLGYLTPCEYEQQWRQQNNHYCMNKEDSA
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ARLMRQIGIMAKTKVKRKRTTNSEHSFPRYGNRVLNLSIDHPEQVWVADITYIRLQQEF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
VYLAVVMDVFTRAIRGWHLSRHIDQQLTLRALNKALERATPEIHHSDQGVQYAAAAYMQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LQQHQVQISMAEVGQAWQNGYAERLMRTIKEEEVDLSDYRNFTEAYEHIEQFLEDVYMHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RIHSSLGYLTPCEYEQQWRQQNNHYCMNKEDSA
HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]