Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158333501

Identifier: 158333501

GI number: 158333501

Start: 272031

End: 272513

Strand: Direct

Name: 158333501

Synonym: AM1_0273

Alternate gene names: NA

Gene position: 272031-272513 (Clockwise)

Preceding gene: 158333500

Following gene: 158333502

Centisome position: 4.18

GC content: 45.96

Gene sequence:

>483_bases
ATGGTTCAGTATCTAGCCAATTCCAAGTTTTATTTTGAGATAGATGGAGTCACTTCTTTAACCCTTAAATCAATCAGTGG
CCCTGAAATTGAACTGGAAGTGGCAGGGGGGGATTCAGCCATTGGCGTGACCAAAGATGCTAAAACCCAGACTCAAGCGA
CGATTGGTGGTGTCAAATACAATAGCACCATCGCCCTCACCTATGTTGCAGGTAACGAGGGAGAGCAAAAGAAGCTTTCA
GATTGGTACGATGACTGCCACCCAGACACATTTTCAGGAGGAGGTTCAAAAGCCATGGAAGGCCGTAAAACCGGGTCTTT
AGTGATTTATAACCCGGATGGCAAAGAAGCCATGCGCTTTAACTTCACGGATCTATTCCCTGGGGCGAAAAAGCAGGTGG
GTAGTCTATCAGTGGATAGTGGTGGACAACTAGCGGAAGACAATATTGATCTGTATTTCACTCAGGTCATCCGCAAAGTC
TAA

Upstream 100 bases:

>100_bases
ATCACTTGCGAGAAGTTTAACCGGACAAAATAGTGCCGCTTGCTTCTCGTTAGATCTAGCACAATAGTGTAATTATCAGG
GATAAATTCGGAGACCCAAA

Downstream 100 bases:

>100_bases
GTTCTATTCACAGTTCACTAAGGTGAACCGCTCCAATGCCTGATCTACCAGAAATCCTTACACGGTCAAGATTTTATCTA
GAACTGAAACTCGAGGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MVQYLANSKFYFEIDGVTSLTLKSISGPEIELEVAGGDSAIGVTKDAKTQTQATIGGVKYNSTIALTYVAGNEGEQKKLS
DWYDDCHPDTFSGGGSKAMEGRKTGSLVIYNPDGKEAMRFNFTDLFPGAKKQVGSLSVDSGGQLAEDNIDLYFTQVIRKV

Sequences:

>Translated_160_residues
MVQYLANSKFYFEIDGVTSLTLKSISGPEIELEVAGGDSAIGVTKDAKTQTQATIGGVKYNSTIALTYVAGNEGEQKKLS
DWYDDCHPDTFSGGGSKAMEGRKTGSLVIYNPDGKEAMRFNFTDLFPGAKKQVGSLSVDSGGQLAEDNIDLYFTQVIRKV
>Mature_160_residues
MVQYLANSKFYFEIDGVTSLTLKSISGPEIELEVAGGDSAIGVTKDAKTQTQATIGGVKYNSTIALTYVAGNEGEQKKLS
DWYDDCHPDTFSGGGSKAMEGRKTGSLVIYNPDGKEAMRFNFTDLFPGAKKQVGSLSVDSGGQLAEDNIDLYFTQVIRKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17223; Mature: 17223

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQYLANSKFYFEIDGVTSLTLKSISGPEIELEVAGGDSAIGVTKDAKTQTQATIGGVKY
CCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCEEE
NSTIALTYVAGNEGEQKKLSDWYDDCHPDTFSGGGSKAMEGRKTGSLVIYNPDGKEAMRF
CCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
NFTDLFPGAKKQVGSLSVDSGGQLAEDNIDLYFTQVIRKV
CCHHCCCCCCCCCCEEEECCCCCEECCCCEEHHHHHHHCC
>Mature Secondary Structure
MVQYLANSKFYFEIDGVTSLTLKSISGPEIELEVAGGDSAIGVTKDAKTQTQATIGGVKY
CCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCEEECCEEE
NSTIALTYVAGNEGEQKKLSDWYDDCHPDTFSGGGSKAMEGRKTGSLVIYNPDGKEAMRF
CCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEE
NFTDLFPGAKKQVGSLSVDSGGQLAEDNIDLYFTQVIRKV
CCHHCCCCCCCCCCEEEECCCCCEECCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA