| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333475
Identifier: 158333475
GI number: 158333475
Start: 243292
End: 244011
Strand: Direct
Name: 158333475
Synonym: AM1_0247
Alternate gene names: NA
Gene position: 243292-244011 (Clockwise)
Preceding gene: 158333471
Following gene: 158333476
Centisome position: 3.74
GC content: 47.5
Gene sequence:
>720_bases ATGGTATTCCAGCGCTCTATCTCCGTATCTTTGGGAATGGTGCTTGCCCCCCTCATTAGCTTGTCCTGTGCAGATATAGG ACAGGCTGCCGAGAGCATCATTGTTCGCTACAAGTCAGAAGAAGCAACGGTGACTCGAAAAGACCTCAACAGGTTTGCGG AGACGGGGGAGATGCCCGCTGATTTGCAAAAGTTGCTAGGGACAGATGCCCAAGTGCCCAATGGTGTTCAAACACTCTTA AGAGAAGAAATCAAAATTCCTAGGTTTGTCGAACGCTTCATCGAAGGATCCAATGGTGATTTTTTATTATTGAAACTGGA TGATGCCATTAGTAGTGCTTCGGGCAGCACGGAAAGGGATTTAAATGCAATTCGAACGGCTGTATTAGATTCTATTGCTG ACAACCGAGTATCCTTTATTGAACTGATTGCCAAGCATCCCCAAACTCAAATTCAGCTTGATCTGACCAGTTTAGAGGGG ACTTACAAGGATGTACGCGGTTTTGTGGAGCGGGTACTGCCTGCCCTTGAAGTGGCTAAAGGGGTGTTGCAAGATTTAGT TTGCGACTGTGATACGGCGAAATCTGCGGTTGAACCGGCAGTAGATACGCCTGAAGGCAAGCAATACCAGTCTGCGAATA CAGTGACCGACCGTCATTCCTCGCAGAATTGCAATCACCTTGAGCCGACTGAACAGGCTATCCCAATCGAGACCAAATAG
Upstream 100 bases:
>100_bases TTCAAGATACAAAAACAACGACATATCAATTGGTACAATTCTTTAGTTAGATCTCAGTGGACCCTAGCAGATCGAGCAAC GATTTCTCAAGGAGGATTCC
Downstream 100 bases:
>100_bases CTTGCTTTCCCAGGACGCAAGTCTTTCCCTCATTAACCAGAAGTCAGCTCTCTCAATTTGGGACCGTACTATGGCATTAA CATCGATGATAGGTCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MVFQRSISVSLGMVLAPLISLSCADIGQAAESIIVRYKSEEATVTRKDLNRFAETGEMPADLQKLLGTDAQVPNGVQTLL REEIKIPRFVERFIEGSNGDFLLLKLDDAISSASGSTERDLNAIRTAVLDSIADNRVSFIELIAKHPQTQIQLDLTSLEG TYKDVRGFVERVLPALEVAKGVLQDLVCDCDTAKSAVEPAVDTPEGKQYQSANTVTDRHSSQNCNHLEPTEQAIPIETK
Sequences:
>Translated_239_residues MVFQRSISVSLGMVLAPLISLSCADIGQAAESIIVRYKSEEATVTRKDLNRFAETGEMPADLQKLLGTDAQVPNGVQTLL REEIKIPRFVERFIEGSNGDFLLLKLDDAISSASGSTERDLNAIRTAVLDSIADNRVSFIELIAKHPQTQIQLDLTSLEG TYKDVRGFVERVLPALEVAKGVLQDLVCDCDTAKSAVEPAVDTPEGKQYQSANTVTDRHSSQNCNHLEPTEQAIPIETK >Mature_239_residues MVFQRSISVSLGMVLAPLISLSCADIGQAAESIIVRYKSEEATVTRKDLNRFAETGEMPADLQKLLGTDAQVPNGVQTLL REEIKIPRFVERFIEGSNGDFLLLKLDDAISSASGSTERDLNAIRTAVLDSIADNRVSFIELIAKHPQTQIQLDLTSLEG TYKDVRGFVERVLPALEVAKGVLQDLVCDCDTAKSAVEPAVDTPEGKQYQSANTVTDRHSSQNCNHLEPTEQAIPIETK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26128; Mature: 26128
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFQRSISVSLGMVLAPLISLSCADIGQAAESIIVRYKSEEATVTRKDLNRFAETGEMPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCH DLQKLLGTDAQVPNGVQTLLREEIKIPRFVERFIEGSNGDFLLLKLDDAISSASGSTERD HHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCHHH LNAIRTAVLDSIADNRVSFIELIAKHPQTQIQLDLTSLEGTYKDVRGFVERVLPALEVAK HHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH GVLQDLVCDCDTAKSAVEPAVDTPEGKQYQSANTVTDRHSSQNCNHLEPTEQAIPIETK HHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVFQRSISVSLGMVLAPLISLSCADIGQAAESIIVRYKSEEATVTRKDLNRFAETGEMPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCH DLQKLLGTDAQVPNGVQTLLREEIKIPRFVERFIEGSNGDFLLLKLDDAISSASGSTERD HHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCHHH LNAIRTAVLDSIADNRVSFIELIAKHPQTQIQLDLTSLEGTYKDVRGFVERVLPALEVAK HHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHH GVLQDLVCDCDTAKSAVEPAVDTPEGKQYQSANTVTDRHSSQNCNHLEPTEQAIPIETK HHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA