| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333424
Identifier: 158333424
GI number: 158333424
Start: 194978
End: 196156
Strand: Direct
Name: 158333424
Synonym: AM1_0196
Alternate gene names: NA
Gene position: 194978-196156 (Clockwise)
Preceding gene: 158333423
Following gene: 158333425
Centisome position: 3.0
GC content: 44.19
Gene sequence:
>1179_bases ATGCAGATATCCAAGGGAGCCAACTATCTTTGGGGACTGCTAGTAATCACCCTTTTAGTCGTGGTATCAGCCAGTCATCT TGCAACTAAGAATATGAGCCACCCTCATCCAAAACAACGTTATTTTTATCAAGGTTTTATCTATCAGCCTTATGACTGGA GCGATGAAGCTTTTGAAGAAACTTTTCGGGTGATCGGGGAAAACAGTGACATCATTGGTTTCTACTTTGATGGTTTTGTG CCCTGGAATGAGGCAGCAGCAAAGAAAACCTATCATCCAGTACAGGAGCAGGAAATCCAAAAAAGAATCAATGGCATTAA ACCTCACCAAAAGATTTTCCTGGGGACGAGTCTTTTAGGGAGTGATCGGGTCAGTCTCTCGGGTTATTTAGGGGAATACG AAGTTCCAAGAACAGGCAAGTGGAAAGATAAGACTTTCGATGATCCAGAAGTGATTGCGGCTTATCTTCATTGGTGTCGA GATCTCATTACCCGGTTTCAGCCTGATTATTTTATGTATGTAGCAGAGGTAGATTCTGGCCTTGTTAACGTTGATGATCC TCGCTTCCAAAGTCTACTCCGTTCGGTGAAGCAGATTTACCCAGTATTAAAACGGGAGTTCCCATCCCTGCCGATACTCA TTGAATTTGTGCTAGAAAATGACGAACAGATGAGTAAACGATCGGAGGTGACTCAATCGTTATTACCCTATACGGATATG TATGCGGTGAGTACCTTCCCCTTCATTATGACGGGAGGCAATCCTGCGGATATTCCTAAGGATTGGTTTTCACGGGCAAA GGAAATCGCACCAAATAAGCCGTTCGCAGTCGTTGAAACTAATTTCTTGGCTGAAGACTTTTATCATCCAACACAGGGAA TTCCTATTCCATTTAGGAAGAAACGCTTACTGATTCCGGCGCGAGAGAAGTGGCAAGCTGCGTATATTGAATTCTTGCTT TCTGAAGCCCATCGATTGGAGGCAGAGTTTGTGTTGCACTGGGGGTATCGCGATTTGGACCAATTGCAAGCCAAGTTGGA TGGTACGGGTGGTGCGTTTGATTCAAATATTCATGGCTTTGCCAGTTTATCTAAAGACTGTGGACTTATTGACGAGAAAG GTCGTCCTCGCCCCTCCTTTAACGTATGGCAAAGATGGCTGTCTCTTCCAAAAGTCTAG
Upstream 100 bases:
>100_bases GACACCTCAAAAAAATGGCGATGCTCTATCATCACCAGAAAATTGAAAATAACCCATAGTTCATACCCTGAGTTTAAGGA TGTGGAGAACGCCAGAGATA
Downstream 100 bases:
>100_bases CTTGGAGGTGAGCGCAGCCTTGAATTTTACGTGATAGCTTGTCATACATCCTTTGTGCCTTTTAAACCCTGTATGGGAAC ACTTAGAGCTGAAAAGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MQISKGANYLWGLLVITLLVVVSASHLATKNMSHPHPKQRYFYQGFIYQPYDWSDEAFEETFRVIGENSDIIGFYFDGFV PWNEAAAKKTYHPVQEQEIQKRINGIKPHQKIFLGTSLLGSDRVSLSGYLGEYEVPRTGKWKDKTFDDPEVIAAYLHWCR DLITRFQPDYFMYVAEVDSGLVNVDDPRFQSLLRSVKQIYPVLKREFPSLPILIEFVLENDEQMSKRSEVTQSLLPYTDM YAVSTFPFIMTGGNPADIPKDWFSRAKEIAPNKPFAVVETNFLAEDFYHPTQGIPIPFRKKRLLIPAREKWQAAYIEFLL SEAHRLEAEFVLHWGYRDLDQLQAKLDGTGGAFDSNIHGFASLSKDCGLIDEKGRPRPSFNVWQRWLSLPKV
Sequences:
>Translated_392_residues MQISKGANYLWGLLVITLLVVVSASHLATKNMSHPHPKQRYFYQGFIYQPYDWSDEAFEETFRVIGENSDIIGFYFDGFV PWNEAAAKKTYHPVQEQEIQKRINGIKPHQKIFLGTSLLGSDRVSLSGYLGEYEVPRTGKWKDKTFDDPEVIAAYLHWCR DLITRFQPDYFMYVAEVDSGLVNVDDPRFQSLLRSVKQIYPVLKREFPSLPILIEFVLENDEQMSKRSEVTQSLLPYTDM YAVSTFPFIMTGGNPADIPKDWFSRAKEIAPNKPFAVVETNFLAEDFYHPTQGIPIPFRKKRLLIPAREKWQAAYIEFLL SEAHRLEAEFVLHWGYRDLDQLQAKLDGTGGAFDSNIHGFASLSKDCGLIDEKGRPRPSFNVWQRWLSLPKV >Mature_392_residues MQISKGANYLWGLLVITLLVVVSASHLATKNMSHPHPKQRYFYQGFIYQPYDWSDEAFEETFRVIGENSDIIGFYFDGFV PWNEAAAKKTYHPVQEQEIQKRINGIKPHQKIFLGTSLLGSDRVSLSGYLGEYEVPRTGKWKDKTFDDPEVIAAYLHWCR DLITRFQPDYFMYVAEVDSGLVNVDDPRFQSLLRSVKQIYPVLKREFPSLPILIEFVLENDEQMSKRSEVTQSLLPYTDM YAVSTFPFIMTGGNPADIPKDWFSRAKEIAPNKPFAVVETNFLAEDFYHPTQGIPIPFRKKRLLIPAREKWQAAYIEFLL SEAHRLEAEFVLHWGYRDLDQLQAKLDGTGGAFDSNIHGFASLSKDCGLIDEKGRPRPSFNVWQRWLSLPKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45280; Mature: 45280
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISKGANYLWGLLVITLLVVVSASHLATKNMSHPHPKQRYFYQGFIYQPYDWSDEAFEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECEEECCCCCCHHHHHH TFRVIGENSDIIGFYFDGFVPWNEAAAKKTYHPVQEQEIQKRINGIKPHQKIFLGTSLLG HHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHEEEEHHHHC SDRVSLSGYLGEYEVPRTGKWKDKTFDDPEVIAAYLHWCRDLITRFQPDYFMYVAEVDSG CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC LVNVDDPRFQSLLRSVKQIYPVLKREFPSLPILIEFVLENDEQMSKRSEVTQSLLPYTDM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEECCCCHHHHHHHHHHHHHCCHHHH YAVSTFPFIMTGGNPADIPKDWFSRAKEIAPNKPFAVVETNFLAEDFYHPTQGIPIPFRK HHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC KRLLIPAREKWQAAYIEFLLSEAHRLEAEFVLHWGYRDLDQLQAKLDGTGGAFDSNIHGF CEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHH ASLSKDCGLIDEKGRPRPSFNVWQRWLSLPKV HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MQISKGANYLWGLLVITLLVVVSASHLATKNMSHPHPKQRYFYQGFIYQPYDWSDEAFEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECEEECCCCCCHHHHHH TFRVIGENSDIIGFYFDGFVPWNEAAAKKTYHPVQEQEIQKRINGIKPHQKIFLGTSLLG HHHHHCCCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHEEEEHHHHC SDRVSLSGYLGEYEVPRTGKWKDKTFDDPEVIAAYLHWCRDLITRFQPDYFMYVAEVDSG CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC LVNVDDPRFQSLLRSVKQIYPVLKREFPSLPILIEFVLENDEQMSKRSEVTQSLLPYTDM CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHEECCCCHHHHHHHHHHHHHCCHHHH YAVSTFPFIMTGGNPADIPKDWFSRAKEIAPNKPFAVVETNFLAEDFYHPTQGIPIPFRK HHHHHCCEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCC KRLLIPAREKWQAAYIEFLLSEAHRLEAEFVLHWGYRDLDQLQAKLDGTGGAFDSNIHGF CEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHH ASLSKDCGLIDEKGRPRPSFNVWQRWLSLPKV HHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA