| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333408
Identifier: 158333408
GI number: 158333408
Start: 184336
End: 184878
Strand: Reverse
Name: 158333408
Synonym: AM1_0180
Alternate gene names: NA
Gene position: 184878-184336 (Counterclockwise)
Preceding gene: 158333410
Following gene: 158333405
Centisome position: 2.84
GC content: 48.62
Gene sequence:
>543_bases GTGTCTCAAACTTTAACCCTCCCTTCCCCCACAGCCCCCACCCTCCAATCGACATTTCCTCAGACAGAGACCTACTTTAT TACTCTCTGCACCCATGAACGAGAGTGCTTGTTTGGGGAAATTATTGCTGGTGAAATGCAGCTTAATGATTTAGGAGCAT TAGTTGCAGAAGAATGGCAGATCTCATTCGATCAGAGTTCCGACTTTGACCTCCACCATTGGGTGATGATGCCTAACCAT ATTCACGGCATTATTGGCGCAGCTAACCCAAGCTCCCAAGACCTGGCCCAACAGCCCCTGATGCAGGAAACGAAGGTGCG ATCGCATTCCCTGCTCAAGTGGATCTCATCCTTTAAAGGGATGGCCAGCCAACGCATCAAGCATCTGAGAAACTTGCCCC ATCAACCCCTTTGGCAACAAGAAGTGGATCAGCACATCATTCCTCATCGGTTTGCCTTTCACACTTTCCACCAATACATC ACTACCAACCCCCATGCCTGGGATTGGGATAAATTACATCCAGATAGTCCAGCTCTATCCTAA
Upstream 100 bases:
>100_bases CTATTTTTATATTCTTTAGATTTTCCATTCATATGGGCATTCTAAGGACAATGCATTCAAATCCAACTCAACTCTTTCCA ACAACAATAGCTTTCCTCTC
Downstream 100 bases:
>100_bases GTTCACCTATCTGTTTTTCTGGTCTGTTTGGAATCTTGCGAAGGCCAATATCAGGTCGTCAGTGTTTCCAAGGATGGTGA CATAACTCGACGGCTGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSQTLTLPSPTAPTLQSTFPQTETYFITLCTHERECLFGEIIAGEMQLNDLGALVAEEWQISFDQSSDFDLHHWVMMPNH IHGIIGAANPSSQDLAQQPLMQETKVRSHSLLKWISSFKGMASQRIKHLRNLPHQPLWQQEVDQHIIPHRFAFHTFHQYI TTNPHAWDWDKLHPDSPALS
Sequences:
>Translated_180_residues MSQTLTLPSPTAPTLQSTFPQTETYFITLCTHERECLFGEIIAGEMQLNDLGALVAEEWQISFDQSSDFDLHHWVMMPNH IHGIIGAANPSSQDLAQQPLMQETKVRSHSLLKWISSFKGMASQRIKHLRNLPHQPLWQQEVDQHIIPHRFAFHTFHQYI TTNPHAWDWDKLHPDSPALS >Mature_179_residues SQTLTLPSPTAPTLQSTFPQTETYFITLCTHERECLFGEIIAGEMQLNDLGALVAEEWQISFDQSSDFDLHHWVMMPNHI HGIIGAANPSSQDLAQQPLMQETKVRSHSLLKWISSFKGMASQRIKHLRNLPHQPLWQQEVDQHIIPHRFAFHTFHQYIT TNPHAWDWDKLHPDSPALS
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20739; Mature: 20607
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTLTLPSPTAPTLQSTFPQTETYFITLCTHERECLFGEIIAGEMQLNDLGALVAEEWQ CCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHE ISFDQSSDFDLHHWVMMPNHIHGIIGAANPSSQDLAQQPLMQETKVRSHSLLKWISSFKG EECCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MASQRIKHLRNLPHQPLWQQEVDQHIIPHRFAFHTFHQYITTNPHAWDWDKLHPDSPALS HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQTLTLPSPTAPTLQSTFPQTETYFITLCTHERECLFGEIIAGEMQLNDLGALVAEEWQ CCCCCCCCCCCCCHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHE ISFDQSSDFDLHHWVMMPNHIHGIIGAANPSSQDLAQQPLMQETKVRSHSLLKWISSFKG EECCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MASQRIKHLRNLPHQPLWQQEVDQHIIPHRFAFHTFHQYITTNPHAWDWDKLHPDSPALS HHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]