| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333386
Identifier: 158333386
GI number: 158333386
Start: 156118
End: 156816
Strand: Reverse
Name: 158333386
Synonym: AM1_0158
Alternate gene names: NA
Gene position: 156816-156118 (Counterclockwise)
Preceding gene: 158333387
Following gene: 158333385
Centisome position: 2.41
GC content: 48.07
Gene sequence:
>699_bases ATGTCTATTTTTCCCCAAGTACAAACACGATCTAGCCTTTGCAGTTTACGTCTTGCGGTAGCAGCAGCAGTTCTAGGAAC CAGCACTAGTTTGTTGGTGGGTACAGGGGCCATCGCAGCTGAGTCGGTCACCCTTAAATATAATTCCGACACCGTAACGG TTACCTTACCCGAGATGCAAAGCTTTGCCCAGTCGGGTCAGCTAACCCCAGCCCTCCAAACCTTTTTTCATACCACTCAA AAAGTCCCTACCCAGTGGAGCGAACTCCTCACCAAAGAAATCAAAATCCCCTATTTTATTGAACGTTTGATCCACAGTCC CAAAGGCAGGTTTGTCCTCCACCAAATTGACGAAATGGTCTACGAGAGCGGATCAAAAGGGCTAGAAGATTTAGACAAAG CCGTTACTAAGGCGATGGCCGATGGCAACATCTCCGTCATTGAAGTCATTCGAGACTACCCTGCTTCCACCATCAATATC GACCTCAAGGTGGTTGAAACGGACTACAACCAAATCAAACAACTGGCAGAAGGCATCGAAAAAGGCGATTCCACCACCCC TGCCCCCGATTTCCTTAAAGGCATCCTGTGTCATTGCCAAACCGCTCAAAATAATGCCACATCCCAGACCCAACTTCCCT CAACTCAATTGACATCATCCAAGCCAATAGCTTGTCATCTGCCCTTGGTCCAGAAGTAG
Upstream 100 bases:
>100_bases TAATCACTGAGAATTAGAACGCTTTATTGTCTGCGCTAATTCCCAATTCTTTCTTAATGTCGAATGTTGTCATTTATTCC TACGAATAGGAGAATTTGTG
Downstream 100 bases:
>100_bases TGGCCCACAAACTCATGTCCAACATTAGCTAAAACACCGACACATTGAATCAAAGGAGAAACATTATGGTTTTGTCATTC CAGTCCTTCAATCGTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSIFPQVQTRSSLCSLRLAVAAAVLGTSTSLLVGTGAIAAESVTLKYNSDTVTVTLPEMQSFAQSGQLTPALQTFFHTTQ KVPTQWSELLTKEIKIPYFIERLIHSPKGRFVLHQIDEMVYESGSKGLEDLDKAVTKAMADGNISVIEVIRDYPASTINI DLKVVETDYNQIKQLAEGIEKGDSTTPAPDFLKGILCHCQTAQNNATSQTQLPSTQLTSSKPIACHLPLVQK
Sequences:
>Translated_232_residues MSIFPQVQTRSSLCSLRLAVAAAVLGTSTSLLVGTGAIAAESVTLKYNSDTVTVTLPEMQSFAQSGQLTPALQTFFHTTQ KVPTQWSELLTKEIKIPYFIERLIHSPKGRFVLHQIDEMVYESGSKGLEDLDKAVTKAMADGNISVIEVIRDYPASTINI DLKVVETDYNQIKQLAEGIEKGDSTTPAPDFLKGILCHCQTAQNNATSQTQLPSTQLTSSKPIACHLPLVQK >Mature_231_residues SIFPQVQTRSSLCSLRLAVAAAVLGTSTSLLVGTGAIAAESVTLKYNSDTVTVTLPEMQSFAQSGQLTPALQTFFHTTQK VPTQWSELLTKEIKIPYFIERLIHSPKGRFVLHQIDEMVYESGSKGLEDLDKAVTKAMADGNISVIEVIRDYPASTINID LKVVETDYNQIKQLAEGIEKGDSTTPAPDFLKGILCHCQTAQNNATSQTQLPSTQLTSSKPIACHLPLVQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25252; Mature: 25121
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFPQVQTRSSLCSLRLAVAAAVLGTSTSLLVGTGAIAAESVTLKYNSDTVTVTLPEMQ CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCEEEEEEEEECCCEEEEECHHHH SFAQSGQLTPALQTFFHTTQKVPTQWSELLTKEIKIPYFIERLIHSPKGRFVLHQIDEMV HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH YESGSKGLEDLDKAVTKAMADGNISVIEVIRDYPASTINIDLKVVETDYNQIKQLAEGIE HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHH KGDSTTPAPDFLKGILCHCQTAQNNATSQTQLPSTQLTSSKPIACHLPLVQK CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure SIFPQVQTRSSLCSLRLAVAAAVLGTSTSLLVGTGAIAAESVTLKYNSDTVTVTLPEMQ CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCEEEEEEEEECCCEEEEECHHHH SFAQSGQLTPALQTFFHTTQKVPTQWSELLTKEIKIPYFIERLIHSPKGRFVLHQIDEMV HHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHH YESGSKGLEDLDKAVTKAMADGNISVIEVIRDYPASTINIDLKVVETDYNQIKQLAEGIE HHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHH KGDSTTPAPDFLKGILCHCQTAQNNATSQTQLPSTQLTSSKPIACHLPLVQK CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA