| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333347
Identifier: 158333347
GI number: 158333347
Start: 122949
End: 123353
Strand: Direct
Name: 158333347
Synonym: AM1_0118
Alternate gene names: NA
Gene position: 122949-123353 (Clockwise)
Preceding gene: 158333346
Following gene: 158333348
Centisome position: 1.89
GC content: 50.37
Gene sequence:
>405_bases ATGAGTCATCAAACAACTCCCATCACCCGAGTGGTGATCGCCCATACTCTGATTAGTGCTCTACATGGCCTAGCCCATCT GCTCATTCCGGTTCCGATCTCAGTCTTACAAGCCCTGTTTATTGCGGGGGTGATTTCAGCGCTGCCAATCGTTGCCGTGG TTTTGGTCTGGAGACAGCAGGTTAAATGGGCTTCAACGGTGCTGTTAGTATCGATGGCAGGGTCTCTTCTCTTTGGTCTG TACAACCACTTTGTTGTTATCAGCCCCGATCATTTTTCTCAGATGCCTCCCACGAGTTTGGGAGTTCTATTTCAGGTCAC GGCAATTCTACTGGCCGTCTCGGAAGGCATTGGTATTGGAGTTAGTGTATGGGCACTCAACCCTCGGCAGCCTCTCATCC CTTAA
Upstream 100 bases:
>100_bases TGATAGCAATTGTGACCATCAATAGTTGGAATCGTCTGGTGATCGCATCCCAAGTCCTGCCCGGTAGCTACACTGTTCCA GTCGCCGCTTGAGCCACATC
Downstream 100 bases:
>100_bases CGGATGATTTTTTGGAGTATCGGTCGCTTTTGTTTGCGATCGCATATCGGATGCTGGGTACCGTTATGGATGCGGAGGAC ATGGTGCAGGATACCTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSHQTTPITRVVIAHTLISALHGLAHLLIPVPISVLQALFIAGVISALPIVAVVLVWRQQVKWASTVLLVSMAGSLLFGL YNHFVVISPDHFSQMPPTSLGVLFQVTAILLAVSEGIGIGVSVWALNPRQPLIP
Sequences:
>Translated_134_residues MSHQTTPITRVVIAHTLISALHGLAHLLIPVPISVLQALFIAGVISALPIVAVVLVWRQQVKWASTVLLVSMAGSLLFGL YNHFVVISPDHFSQMPPTSLGVLFQVTAILLAVSEGIGIGVSVWALNPRQPLIP >Mature_133_residues SHQTTPITRVVIAHTLISALHGLAHLLIPVPISVLQALFIAGVISALPIVAVVLVWRQQVKWASTVLLVSMAGSLLFGLY NHFVVISPDHFSQMPPTSLGVLFQVTAILLAVSEGIGIGVSVWALNPRQPLIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14309; Mature: 14178
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQTTPITRVVIAHTLISALHGLAHLLIPVPISVLQALFIAGVISALPIVAVVLVWRQQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKWASTVLLVSMAGSLLFGLYNHFVVISPDHFSQMPPTSLGVLFQVTAILLAVSEGIGIG HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC VSVWALNPRQPLIP EEEEEECCCCCCCC >Mature Secondary Structure SHQTTPITRVVIAHTLISALHGLAHLLIPVPISVLQALFIAGVISALPIVAVVLVWRQQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKWASTVLLVSMAGSLLFGLYNHFVVISPDHFSQMPPTSLGVLFQVTAILLAVSEGIGIG HHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC VSVWALNPRQPLIP EEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA