| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158333260
Identifier: 158333260
GI number: 158333260
Start: 31872
End: 33323
Strand: Direct
Name: 158333260
Synonym: AM1_0030
Alternate gene names: NA
Gene position: 31872-33323 (Clockwise)
Preceding gene: 158333259
Following gene: 158333262
Centisome position: 0.49
GC content: 49.1
Gene sequence:
>1452_bases ATGAAACGTTTGTTGGGATGGGGGAGTATCCCCTGGCTAGCACTGGCTATCGGTAGCTTTCAAACACCAGCCCAAGCGCT AGACTCAGTACAATTTTTACTCAATGAGGGGTTTTGCCAAGCCTGTACCCTTAGTAACTCAGACCTATCGGGGCTAGAAC TAGCGAATGTCAAACTGAACCATGCCATTCTAATCAAGGCCGATTTGTCCGGAGCTAATTTATCGGGAGCTGACCTCACA GGTGCCAACCTTTCCGGCGCGAATCTGAGCGGGGCCGATCTCACGAATGCCAATCTTACGAATGCAAACTTAGACCAAGT TAATTTAACTGGTGCTCGCCTCAATAACACCAACTTAGCAGGAGCAAATGTACAAATTGCTGTAAATACTCCAGTACCTT CTACAGCTCAATCCTCTTTTGTCAGTTACTACAATCCACCAGAAGAGTCCACCGACATTAGCCCTATTTCTCCCATCCCC TCAGCTCCACCTCCAACCTATGGACGTGTATTAAATCCACCTAAATCCGGCTATCAATCCCCGACGGCAGTCGCTACTCG TGCCCCATCCATACCGGCTCCATCCGCCCCGCCAATTCCCACAGAATCACCCACTGTAGCGGATAATAGCATCGGGGGAG CGGATGATCCGAGCCAAGCTGCTGCCCTAACAACAGATGGTATTGGCATTATCGACGGGGGAACCGTTCCTAAAGGCAGA GTCCTAGTGAGTCTCAAAGGGGGACCTCAGGGCATTCAAAGCACAGTACGATATGGCATTTTGGGAGATCTCGAAGCCTT AGGCTATCTTGACTACTCCTTTGGTACTGTTGACGAGTCCGAGCAAGGTTTCGGTCTAAAATATCGCTTCCTCGACCAGG CGAAAGGCAAACCCTTAACCATTAGTGCTGCCGTCAACGTAGGGCTCACGGGCGAAACCTTTATCAACTATGCCACCAAT AATCGAAATGAGTTCCGACAACGGGGCCTGAATAAAGCAGTTCCCACAATCTTCCAAGGCACCGATGGCAATGTCGGTAA TAATCTGATCTATAGCGTCTCGTTGCCTGTCCATTATCAAGCGACGGACCGATTAAATTTATGGGTCACCCCTACCTTTA GCTACGTTCAAGATAGAGATATTGCGGTCGGAGGCTTTAATTTTGGCGGCTCCTACGAAATCGTTAATAATCTAAATTTC ATTGCCGAAGTCGGGGCTAGTTTTGCTGGCCGAGGCAACGCCTTCCTCAATAACACCTTGGGTGACGCTATTCCTTGGAA TGTGGGGTTCCGGTATGATTCCTCAACACTATTTGGATTTACCCCCGGCAGTAAACAACTCATTTTTGACTTGTATGCCA CCAACCGAGTGGGAACATCACCCTGGAACCAACTTCGAGTCCGAGATCAGGATGAGCCCACAATTGGCGTAGGAGTTCAC CTCTTGTGGTAA
Upstream 100 bases:
>100_bases ATATAATTGATAAATTTAAATTTCAAAGTAATTTTTAGAATCAATTGGTCAATACTTCTAAATACTGCATTGGAATCATT TGTGACGGGGGGTCAACAGA
Downstream 100 bases:
>100_bases CTCAGAACACCTAACCATCCCTGAGGGGTAATACCCTAACGACCTTTTTTCTCTGGGTAATTTCGAGGTGGGATAGATCG CCCTTTTAGAAATCTTTTCT
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MKRLLGWGSIPWLALAIGSFQTPAQALDSVQFLLNEGFCQACTLSNSDLSGLELANVKLNHAILIKADLSGANLSGADLT GANLSGANLSGADLTNANLTNANLDQVNLTGARLNNTNLAGANVQIAVNTPVPSTAQSSFVSYYNPPEESTDISPISPIP SAPPPTYGRVLNPPKSGYQSPTAVATRAPSIPAPSAPPIPTESPTVADNSIGGADDPSQAAALTTDGIGIIDGGTVPKGR VLVSLKGGPQGIQSTVRYGILGDLEALGYLDYSFGTVDESEQGFGLKYRFLDQAKGKPLTISAAVNVGLTGETFINYATN NRNEFRQRGLNKAVPTIFQGTDGNVGNNLIYSVSLPVHYQATDRLNLWVTPTFSYVQDRDIAVGGFNFGGSYEIVNNLNF IAEVGASFAGRGNAFLNNTLGDAIPWNVGFRYDSSTLFGFTPGSKQLIFDLYATNRVGTSPWNQLRVRDQDEPTIGVGVH LLW
Sequences:
>Translated_483_residues MKRLLGWGSIPWLALAIGSFQTPAQALDSVQFLLNEGFCQACTLSNSDLSGLELANVKLNHAILIKADLSGANLSGADLT GANLSGANLSGADLTNANLTNANLDQVNLTGARLNNTNLAGANVQIAVNTPVPSTAQSSFVSYYNPPEESTDISPISPIP SAPPPTYGRVLNPPKSGYQSPTAVATRAPSIPAPSAPPIPTESPTVADNSIGGADDPSQAAALTTDGIGIIDGGTVPKGR VLVSLKGGPQGIQSTVRYGILGDLEALGYLDYSFGTVDESEQGFGLKYRFLDQAKGKPLTISAAVNVGLTGETFINYATN NRNEFRQRGLNKAVPTIFQGTDGNVGNNLIYSVSLPVHYQATDRLNLWVTPTFSYVQDRDIAVGGFNFGGSYEIVNNLNF IAEVGASFAGRGNAFLNNTLGDAIPWNVGFRYDSSTLFGFTPGSKQLIFDLYATNRVGTSPWNQLRVRDQDEPTIGVGVH LLW >Mature_483_residues MKRLLGWGSIPWLALAIGSFQTPAQALDSVQFLLNEGFCQACTLSNSDLSGLELANVKLNHAILIKADLSGANLSGADLT GANLSGANLSGADLTNANLTNANLDQVNLTGARLNNTNLAGANVQIAVNTPVPSTAQSSFVSYYNPPEESTDISPISPIP SAPPPTYGRVLNPPKSGYQSPTAVATRAPSIPAPSAPPIPTESPTVADNSIGGADDPSQAAALTTDGIGIIDGGTVPKGR VLVSLKGGPQGIQSTVRYGILGDLEALGYLDYSFGTVDESEQGFGLKYRFLDQAKGKPLTISAAVNVGLTGETFINYATN NRNEFRQRGLNKAVPTIFQGTDGNVGNNLIYSVSLPVHYQATDRLNLWVTPTFSYVQDRDIAVGGFNFGGSYEIVNNLNF IAEVGASFAGRGNAFLNNTLGDAIPWNVGFRYDSSTLFGFTPGSKQLIFDLYATNRVGTSPWNQLRVRDQDEPTIGVGVH LLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 50944; Mature: 50944
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLGWGSIPWLALAIGSFQTPAQALDSVQFLLNEGFCQACTLSNSDLSGLELANVKLN CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEEC HAILIKADLSGANLSGADLTGANLSGANLSGADLTNANLTNANLDQVNLTGARLNNTNLA EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCEEC GANVQIAVNTPVPSTAQSSFVSYYNPPEESTDISPISPIPSAPPPTYGRVLNPPKSGYQS CCEEEEEECCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTAVATRAPSIPAPSAPPIPTESPTVADNSIGGADDPSQAAALTTDGIGIIDGGTVPKGR CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCE VLVSLKGGPQGIQSTVRYGILGDLEALGYLDYSFGTVDESEQGFGLKYRFLDQAKGKPLT EEEEECCCCHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEE ISAAVNVGLTGETFINYATNNRNEFRQRGLNKAVPTIFQGTDGNVGNNLIYSVSLPVHYQ EEEEEEECCCCCEEEEEECCCHHHHHHCCCCHHCCEEEECCCCCCCCCEEEEEEEEEEEE ATDRLNLWVTPTFSYVQDRDIAVGGFNFGGSYEIVNNLNFIAEVGASFAGRGNAFLNNTL CCCCEEEEECCCHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHCCHHCCCCCCEECCCC GDAIPWNVGFRYDSSTLFGFTPGSKQLIFDLYATNRVGTSPWNQLRVRDQDEPTIGVGVH CCCCCCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCHHHEEECCCCCCEEEEEEE LLW EEC >Mature Secondary Structure MKRLLGWGSIPWLALAIGSFQTPAQALDSVQFLLNEGFCQACTLSNSDLSGLELANVKLN CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEEEC HAILIKADLSGANLSGADLTGANLSGANLSGADLTNANLTNANLDQVNLTGARLNNTNLA EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECEEECCCEEC GANVQIAVNTPVPSTAQSSFVSYYNPPEESTDISPISPIPSAPPPTYGRVLNPPKSGYQS CCEEEEEECCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTAVATRAPSIPAPSAPPIPTESPTVADNSIGGADDPSQAAALTTDGIGIIDGGTVPKGR CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCCCE VLVSLKGGPQGIQSTVRYGILGDLEALGYLDYSFGTVDESEQGFGLKYRFLDQAKGKPLT EEEEECCCCHHHHHHHHHCCCCCHHHHEEEEECCCCCCCCCCCCCEEEEEHHHCCCCCEE ISAAVNVGLTGETFINYATNNRNEFRQRGLNKAVPTIFQGTDGNVGNNLIYSVSLPVHYQ EEEEEEECCCCCEEEEEECCCHHHHHHCCCCHHCCEEEECCCCCCCCCEEEEEEEEEEEE ATDRLNLWVTPTFSYVQDRDIAVGGFNFGGSYEIVNNLNFIAEVGASFAGRGNAFLNNTL CCCCEEEEECCCHHHHCCCCEEEECCCCCCCEEEECCCHHHHHHCCHHCCCCCCEECCCC GDAIPWNVGFRYDSSTLFGFTPGSKQLIFDLYATNRVGTSPWNQLRVRDQDEPTIGVGVH CCCCCCCCEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCHHHEEECCCCCCEEEEEEE LLW EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]