| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is yhfQ [C]
Identifier: 158333257
GI number: 158333257
Start: 29423
End: 30424
Strand: Direct
Name: yhfQ [C]
Synonym: AM1_0028
Alternate gene names: 158333257
Gene position: 29423-30424 (Clockwise)
Preceding gene: 158333256
Following gene: 158333259
Centisome position: 0.45
GC content: 49.4
Gene sequence:
>1002_bases ATGGCAAAATACGACGTTTACGGTCTCGGCAACGCCCTCGTAGATATTGAATGCGAAGTTTCTGTAGAGGTCTTGCAGAA CCTTGGGGTCGATAAGGGCGTGATGACCCTATTAGAAGAAGCTGATCAACAGCGAATCATTGACCATCTCAGTAGCTATT CTCTTAAGCGAGGGTGTGGTGGCTCAGCAGCTAACACCCTGATTGCCGTTAGCCAATTTGGTGGTAAATCTTGCTACTCT TGCAAAGTTGCCAATGACGAACCGGGTCAGTTTTACCTGGATGATTTGATCTGTTGTGGCGTCGATACCAATTTACAACA GCATCAGCCAGAAGCTGGCGTCACGGGCAAGTGCCTGGTTTTCGTTACCCCGGATGCGGACCGAACCATGAATACCTTTC TGGGTATCTCTGGACGCTTTTCTGAAGCTGAATTGTTGCCGGATGCGATCGCAAATTCCACCTACACCTATATCGAAGGC TACCTAGTCACCTCTCCCGATGCCAAAGCAGCTGCCATCAAAGCCAGAGACATGGCTAAAGCCGCAGGCCAAAAAGTCTC CCTGACTCTATCTGACTTCAACATGGTCAGCTTTTTCAAAGACGGTCTATTGGAGATGATTGGCTCTGGCTTAGATTTAA TCTTTGCCAACGAAAGCGAAGCCCTCAAAATGGCAGAGACCGAGGATATTTCCGCTGCCATTGACCATATGAAAACCCTG GCAACCTGTTTTGCCATCACTCGGGGTCCCCAAGGCTCATTAATTTACGATGGCCAGCAAGTCTTAGAAATTGCACCGAC CCCAGTAAAGGCCATCGATACCGTTGGTGCTGGCGATATGTATGCCGGAGCTGTGCTCTATGGCATTACCAATGGCATGA GCTATAGCGAAGCTGGACAGCTTGGATCGGTTGCCGCAGCTAAACTCGTCGCCAGTCTTGGTCCCCGCATGCCTACGGAA GTGACTCGGAGTCTTTTAACTGAAGTAAAAACGGCTTCCTAA
Upstream 100 bases:
>100_bases TTACCCCTGAAAGGGTTGATTCACCTTTAATCGATGCAAATGCATTACAGTGTTCATGATCCGCTGAAGAATCAGCGATT TGATGAGTACAGGATGACAG
Downstream 100 bases:
>100_bases GACTAGGCAAGCGCTAGCACCTATCAAATACACCAACAGCGTCAAGAAGTAACCTATGGCTCTCCCTGGGGAGGGACCAT AGGTCTCCATCACGCCTACA
Product: PfkB family kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MAKYDVYGLGNALVDIECEVSVEVLQNLGVDKGVMTLLEEADQQRIIDHLSSYSLKRGCGGSAANTLIAVSQFGGKSCYS CKVANDEPGQFYLDDLICCGVDTNLQQHQPEAGVTGKCLVFVTPDADRTMNTFLGISGRFSEAELLPDAIANSTYTYIEG YLVTSPDAKAAAIKARDMAKAAGQKVSLTLSDFNMVSFFKDGLLEMIGSGLDLIFANESEALKMAETEDISAAIDHMKTL ATCFAITRGPQGSLIYDGQQVLEIAPTPVKAIDTVGAGDMYAGAVLYGITNGMSYSEAGQLGSVAAAKLVASLGPRMPTE VTRSLLTEVKTAS
Sequences:
>Translated_333_residues MAKYDVYGLGNALVDIECEVSVEVLQNLGVDKGVMTLLEEADQQRIIDHLSSYSLKRGCGGSAANTLIAVSQFGGKSCYS CKVANDEPGQFYLDDLICCGVDTNLQQHQPEAGVTGKCLVFVTPDADRTMNTFLGISGRFSEAELLPDAIANSTYTYIEG YLVTSPDAKAAAIKARDMAKAAGQKVSLTLSDFNMVSFFKDGLLEMIGSGLDLIFANESEALKMAETEDISAAIDHMKTL ATCFAITRGPQGSLIYDGQQVLEIAPTPVKAIDTVGAGDMYAGAVLYGITNGMSYSEAGQLGSVAAAKLVASLGPRMPTE VTRSLLTEVKTAS >Mature_332_residues AKYDVYGLGNALVDIECEVSVEVLQNLGVDKGVMTLLEEADQQRIIDHLSSYSLKRGCGGSAANTLIAVSQFGGKSCYSC KVANDEPGQFYLDDLICCGVDTNLQQHQPEAGVTGKCLVFVTPDADRTMNTFLGISGRFSEAELLPDAIANSTYTYIEGY LVTSPDAKAAAIKARDMAKAAGQKVSLTLSDFNMVSFFKDGLLEMIGSGLDLIFANESEALKMAETEDISAAIDHMKTLA TCFAITRGPQGSLIYDGQQVLEIAPTPVKAIDTVGAGDMYAGAVLYGITNGMSYSEAGQLGSVAAAKLVASLGPRMPTEV TRSLLTEVKTAS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI1789775, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1788417, Length=287, Percent_Identity=24.0418118466899, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI87081971, Length=293, Percent_Identity=27.6450511945392, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17541820, Length=334, Percent_Identity=23.0538922155689, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6322565, Length=334, Percent_Identity=27.5449101796407, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: NA
Molecular weight: Translated: 35212; Mature: 35081
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYDVYGLGNALVDIECEVSVEVLQNLGVDKGVMTLLEEADQQRIIDHLSSYSLKRGCG CCCEEEEECCCEEEEEEECEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSAANTLIAVSQFGGKSCYSCKVANDEPGQFYLDDLICCGVDTNLQQHQPEAGVTGKCLV CCHHHHEEEEECCCCCCEEEEEECCCCCCCEEECCEEEECCCCCHHHCCCCCCCCCEEEE FVTPDADRTMNTFLGISGRFSEAELLPDAIANSTYTYIEGYLVTSPDAKAAAIKARDMAK EECCCCCHHHHHHHCCCCCCCHHHHCHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHH AAGQKVSLTLSDFNMVSFFKDGLLEMIGSGLDLIFANESEALKMAETEDISAAIDHMKTL HCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHH ATCFAITRGPQGSLIYDGQQVLEIAPTPVKAIDTVGAGDMYAGAVLYGITNGMSYSEAGQ HHHHHHHCCCCCCEEECCHHHEEECCCCHHHHHCCCCCCHHHHHHEEHHHCCCCHHHCCC LGSVAAAKLVASLGPRMPTEVTRSLLTEVKTAS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure AKYDVYGLGNALVDIECEVSVEVLQNLGVDKGVMTLLEEADQQRIIDHLSSYSLKRGCG CCEEEEECCCEEEEEEECEEHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GSAANTLIAVSQFGGKSCYSCKVANDEPGQFYLDDLICCGVDTNLQQHQPEAGVTGKCLV CCHHHHEEEEECCCCCCEEEEEECCCCCCCEEECCEEEECCCCCHHHCCCCCCCCCEEEE FVTPDADRTMNTFLGISGRFSEAELLPDAIANSTYTYIEGYLVTSPDAKAAAIKARDMAK EECCCCCHHHHHHHCCCCCCCHHHHCHHHHHCCEEEEEEEEEEECCCCCHHHHHHHHHHH AAGQKVSLTLSDFNMVSFFKDGLLEMIGSGLDLIFANESEALKMAETEDISAAIDHMKTL HCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHH ATCFAITRGPQGSLIYDGQQVLEIAPTPVKAIDTVGAGDMYAGAVLYGITNGMSYSEAGQ HHHHHHHCCCCCCEEECCHHHEEECCCCHHHHHCCCCCCHHHHHHEEHHHCCCCHHHCCC LGSVAAAKLVASLGPRMPTEVTRSLLTEVKTAS HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]