| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158333238
Identifier: 158333238
GI number: 158333238
Start: 6057
End: 7085
Strand: Direct
Name: 158333238
Synonym: AM1_0007
Alternate gene names: NA
Gene position: 6057-7085 (Clockwise)
Preceding gene: 158333237
Following gene: 158333239
Centisome position: 0.09
GC content: 53.35
Gene sequence:
>1029_bases ATGTTGACGCAATTACCGATTCCTGATTTTTTTGACCCTCAGCGGGTGGGAGAGGTGTGGCGGGTTCCTTACCAGGAACG AGCCCAACAGGCCCAGGACTGGGCTAACCAACAGGGGATACAGCCAGCAGCGAAGGATAAAACGCGCGTCTGCCTGATGG CCATTGATGTCCAAAATACGTTTTGTATTCCCGAGTTTGAGCTGTTTGTGGGGGGACCATCCGGGATGGGGGCGGTGGAG GATAATCGCCGACTCTGCGAGTTTATCTACCGCAATTTAGGGACGATTACGGAAATTGCACCGACGATGGATACCCATAC AGCGATGCAGATCTTCCATGCTGATTTCTGGGTGAATGATCGCGGTGAGTCCCCCGCACCACTCACGATGATTCCTCTGG CGGAGGTGGAGCAGGGGGCCTGGAAGGTAAATCCGGCTATGGCCTATAGTCTGGGCAATTATATGGCGCTGCAGAATTTT GCCCGCCATTATGTTCAAAGTCTTTCCCAAGAGGGCAAATATCCCCTGACAATTTGGCCCTATCACTCCATGTTGGGAGG CATTGGTCACGCCCTAGTGGCGGCGGTGGAGGAGGCCTGTTTTTTCCATAATCTGGCCCGCCATAGTCAGACCCATTTTG AAATTAAGGGGGGTAATCCGCTGACGGAGAATTACTCGGTACTCCGACCGGAGGTTCTCGATGATCCCAAGGGGCGGCCC ATTGCCCAAAAGAATACCCGATTTATCCAAAAGCTGCTGGATTTTGATGCGGTGATTATTGCAGGGCAAGCCAAGAGTCA CTGTGTGGCCTGGACCATTGACGACTTGCTGACGGAAATTCAAGCCCATGACCCGAGTCTGGCCCAGAAAATCTACTTAC TAGAAGATTGTTCTTCGCCGGTGGTGGTGCCAGGGGTGGTCGATTTTACCGAGCAGGCGAATGAAGCGTTCCTCCGGTTC CAGCAAGCGGGGATGCATGTGGTGCAGTCTACGGAGGCGATCTCAACTTGGCCTGGAATCCATCTTTAG
Upstream 100 bases:
>100_bases TTGTACAGACGGGCTGTCAGTTGTTGGCGGCCCCCCAGGGACTCTATACGGTCGGGTCCCAAACGATTCAGTTATTGCAG TTATAGGAGTGTTTGAGATG
Downstream 100 bases:
>100_bases GCAGAAGGGTCAGGATCAACTGTGTGCATAAGGTGTAAGGATGGGCTGCTAGCATTTCTCAATAATGCGTAAATAATCTT TTTTTAATCCACTTGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MLTQLPIPDFFDPQRVGEVWRVPYQERAQQAQDWANQQGIQPAAKDKTRVCLMAIDVQNTFCIPEFELFVGGPSGMGAVE DNRRLCEFIYRNLGTITEIAPTMDTHTAMQIFHADFWVNDRGESPAPLTMIPLAEVEQGAWKVNPAMAYSLGNYMALQNF ARHYVQSLSQEGKYPLTIWPYHSMLGGIGHALVAAVEEACFFHNLARHSQTHFEIKGGNPLTENYSVLRPEVLDDPKGRP IAQKNTRFIQKLLDFDAVIIAGQAKSHCVAWTIDDLLTEIQAHDPSLAQKIYLLEDCSSPVVVPGVVDFTEQANEAFLRF QQAGMHVVQSTEAISTWPGIHL
Sequences:
>Translated_342_residues MLTQLPIPDFFDPQRVGEVWRVPYQERAQQAQDWANQQGIQPAAKDKTRVCLMAIDVQNTFCIPEFELFVGGPSGMGAVE DNRRLCEFIYRNLGTITEIAPTMDTHTAMQIFHADFWVNDRGESPAPLTMIPLAEVEQGAWKVNPAMAYSLGNYMALQNF ARHYVQSLSQEGKYPLTIWPYHSMLGGIGHALVAAVEEACFFHNLARHSQTHFEIKGGNPLTENYSVLRPEVLDDPKGRP IAQKNTRFIQKLLDFDAVIIAGQAKSHCVAWTIDDLLTEIQAHDPSLAQKIYLLEDCSSPVVVPGVVDFTEQANEAFLRF QQAGMHVVQSTEAISTWPGIHL >Mature_342_residues MLTQLPIPDFFDPQRVGEVWRVPYQERAQQAQDWANQQGIQPAAKDKTRVCLMAIDVQNTFCIPEFELFVGGPSGMGAVE DNRRLCEFIYRNLGTITEIAPTMDTHTAMQIFHADFWVNDRGESPAPLTMIPLAEVEQGAWKVNPAMAYSLGNYMALQNF ARHYVQSLSQEGKYPLTIWPYHSMLGGIGHALVAAVEEACFFHNLARHSQTHFEIKGGNPLTENYSVLRPEVLDDPKGRP IAQKNTRFIQKLLDFDAVIIAGQAKSHCVAWTIDDLLTEIQAHDPSLAQKIYLLEDCSSPVVVPGVVDFTEQANEAFLRF QQAGMHVVQSTEAISTWPGIHL
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38337; Mature: 38337
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQLPIPDFFDPQRVGEVWRVPYQERAQQAQDWANQQGIQPAAKDKTRVCLMAIDVQNT CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCE FCIPEFELFVGGPSGMGAVEDNRRLCEFIYRNLGTITEIAPTMDTHTAMQIFHADFWVND EECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHEEECC RGESPAPLTMIPLAEVEQGAWKVNPAMAYSLGNYMALQNFARHYVQSLSQEGKYPLTIWP CCCCCCCEEEEEHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC YHSMLGGIGHALVAAVEEACFFHNLARHSQTHFEIKGGNPLTENYSVLRPEVLDDPKGRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCHHCCCCCCCC IAQKNTRFIQKLLDFDAVIIAGQAKSHCVAWTIDDLLTEIQAHDPSLAQKIYLLEDCSSP CCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCC VVVPGVVDFTEQANEAFLRFQQAGMHVVQSTEAISTWPGIHL EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC >Mature Secondary Structure MLTQLPIPDFFDPQRVGEVWRVPYQERAQQAQDWANQQGIQPAAKDKTRVCLMAIDVQNT CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCE FCIPEFELFVGGPSGMGAVEDNRRLCEFIYRNLGTITEIAPTMDTHTAMQIFHADFWVND EECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHEEECC RGESPAPLTMIPLAEVEQGAWKVNPAMAYSLGNYMALQNFARHYVQSLSQEGKYPLTIWP CCCCCCCEEEEEHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC YHSMLGGIGHALVAAVEEACFFHNLARHSQTHFEIKGGNPLTENYSVLRPEVLDDPKGRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCHHCCCCCCCC IAQKNTRFIQKLLDFDAVIIAGQAKSHCVAWTIDDLLTEIQAHDPSLAQKIYLLEDCSSP CCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHCCCCC VVVPGVVDFTEQANEAFLRFQQAGMHVVQSTEAISTWPGIHL EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA