| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319034
Identifier: 158319034
GI number: 158319034
Start: 8944842
End: 8945531
Strand: Direct
Name: 158319034
Synonym: Franean1_7317
Alternate gene names: NA
Gene position: 8944842-8945531 (Clockwise)
Preceding gene: 158319020
Following gene: 158319035
Centisome position: 99.59
GC content: 70.87
Gene sequence:
>690_bases ATGTTGGAGCTGGCGGTGCTCGCGCTCCTGTCGGAGAGCCCGATGCACGGCTATGAGCTGCGCAAGCGGCTCGCCGCCGT TCTCGGCTCCTTCCACCGCTTCAGCTACGGGTCGCTGTACCCGTGCCTGCGCCGCCTGCAGGCCTCGGGGTACGTGACGG CGGACGACGCCGGCGCGGCCAGCCGCCTCGGTGGCCGCAGCCGGGTCGTCTACACCCTCACCGGCGAGGGCAAGGAAAAG CTCGCGGAACTGCTGGGCGAAGGTGGGCCGTCCTCGTGGGAGGACGAGATGTTCGGCGTCCGCTTCGCCTTCTTCTCCAA GACCGACGCGGCGGTGCGGCTGCGGATCCTCGAGGGGCGGCGCGGCCGGCTCGAGGAGCGTGGGGAGAAGGTGCGCTCGG CGCTGTCCCGTACCACGAAGCGGCTCGACTCCTACACCCTCGAGCTGCAACGGCACGGCCTCGAGTCGGTCGAGCGCGAG GTCAGGTGGCTCAGCGAGCTGATCGAGACCGAACGGGCACAGGCGCCCGGCTCGACGCGCGGCATCTCGACGCGCGAGGT GTTGTCCACATCATCCACAGAGTTGTCCACAGGTTCGTCCACAGCTGACGCGGGACGGGACGAGGCGGTGGGCGGCCCGG AGCACGGTGACGCGGGCTCCGGCGGCGCCGTTCCGTCCCCCGACAGCTAG
Upstream 100 bases:
>100_bases CGACAGGACAAGGCGATACAGAACCAAGCGATACAGTCCGCCGATACACCCGGCCGTCCGGCGGCGGCGGGCGCCGGCCC GGTGCGAGAGGAGAGCGCGC
Downstream 100 bases:
>100_bases CAGGCGACCGGGCGGACCGGCGGCGGGGCGGCACACAGCCACCCGGCGGCGGTACCGCGCGGCGTCGGCACCAGCCGGTG TTCCGGTCAGCACCGGCCGA
Product: PadR-like family transcriptional regulator
Products: NA
Alternate protein names: PadR Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator; ParR Family Transcriptional Regulator; Transcriptional Regulator PadR Family; Padr Family Transcriptional Regulator; Transcriptional Regulator-Like Protein
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MLELAVLALLSESPMHGYELRKRLAAVLGSFHRFSYGSLYPCLRRLQASGYVTADDAGAASRLGGRSRVVYTLTGEGKEK LAELLGEGGPSSWEDEMFGVRFAFFSKTDAAVRLRILEGRRGRLEERGEKVRSALSRTTKRLDSYTLELQRHGLESVERE VRWLSELIETERAQAPGSTRGISTREVLSTSSTELSTGSSTADAGRDEAVGGPEHGDAGSGGAVPSPDS
Sequences:
>Translated_229_residues MLELAVLALLSESPMHGYELRKRLAAVLGSFHRFSYGSLYPCLRRLQASGYVTADDAGAASRLGGRSRVVYTLTGEGKEK LAELLGEGGPSSWEDEMFGVRFAFFSKTDAAVRLRILEGRRGRLEERGEKVRSALSRTTKRLDSYTLELQRHGLESVERE VRWLSELIETERAQAPGSTRGISTREVLSTSSTELSTGSSTADAGRDEAVGGPEHGDAGSGGAVPSPDS >Mature_229_residues MLELAVLALLSESPMHGYELRKRLAAVLGSFHRFSYGSLYPCLRRLQASGYVTADDAGAASRLGGRSRVVYTLTGEGKEK LAELLGEGGPSSWEDEMFGVRFAFFSKTDAAVRLRILEGRRGRLEERGEKVRSALSRTTKRLDSYTLELQRHGLESVERE VRWLSELIETERAQAPGSTRGISTREVLSTSSTELSTGSSTADAGRDEAVGGPEHGDAGSGGAVPSPDS
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24767; Mature: 24767
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELAVLALLSESPMHGYELRKRLAAVLGSFHRFSYGSLYPCLRRLQASGYVTADDAGAA CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH SRLGGRSRVVYTLTGEGKEKLAELLGEGGPSSWEDEMFGVRFAFFSKTDAAVRLRILEGR HHCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCC RGRLEERGEKVRSALSRTTKRLDSYTLELQRHGLESVEREVRWLSELIETERAQAPGSTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GISTREVLSTSSTELSTGSSTADAGRDEAVGGPEHGDAGSGGAVPSPDS CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLELAVLALLSESPMHGYELRKRLAAVLGSFHRFSYGSLYPCLRRLQASGYVTADDAGAA CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCHH SRLGGRSRVVYTLTGEGKEKLAELLGEGGPSSWEDEMFGVRFAFFSKTDAAVRLRILEGR HHCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCC RGRLEERGEKVRSALSRTTKRLDSYTLELQRHGLESVEREVRWLSELIETERAQAPGSTR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GISTREVLSTSSTELSTGSSTADAGRDEAVGGPEHGDAGSGGAVPSPDS CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA