| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158319030
Identifier: 158319030
GI number: 158319030
Start: 8936644
End: 8937858
Strand: Reverse
Name: 158319030
Synonym: Franean1_7313
Alternate gene names: NA
Gene position: 8937858-8936644 (Counterclockwise)
Preceding gene: 158319031
Following gene: 158319029
Centisome position: 99.51
GC content: 73.58
Gene sequence:
>1215_bases ATGACGGCGGACGCTCCGGCCGAGTCGCACGCCGGGCGTCCCGCCGAGTCGGCCGGACACGCCGTTCCCGGCGGCACCGA TCCGGTGCGGCGGGTCTGGGCCCGGCTGCCTGACGCCGTGCAGGCCTCGCTCCCGGTGTGGTTCGCCAGCCGGGTGGCGG TGATGATCGCGTCGCTGGCGGGTGCGCGCGCCCTCTCGGACGGCCCGGCCGGCGACGCGCCCGGCCTCACCACACTCTGG GACCGCTGGGACGTCGGCCTGTTCACCAAGGTGGCCCGCTACGGCTACCTCTCGCCGTCCTACATCGACCGGACGGAGGT CGACTTCCCGGGGCTGCCGCTGGCCATCCGCCTCGTCCACGTGGTCGTCCCGGACTGGATCGCCGCCGGACTGGTGGTCT CGTTCCTCGCCGGCACGCTCGCCGCCGCCGCGTTGTGGCGGCTGGCCGCCGACGAGGTCGGGCGGGAGGACGCGCGGTTC GCGGTCGTCGCGCTCGTCTGCTTCCCGTACGCGGTCTTCCTGTTCGCCGCGTACTCCGAAGGGGTCTTCCTGGGCTTCGC GGTGGCCTCCTGGCTCGCCGCGCGGCGTGACCGGTGGCTGCTCTCCGGCCTGTTGGGCGCCGGCGCCGCCTCGGCGCGGG TGACCGGTATCCCGTTCTGCGCCGCCCTGGTCGTGCAGTACGTGCTCGTGCGCCGCGCCGCGGGCCGCCCGCTCTTCGCC CCGCCGGCGCTGGCGCTCGCCCTGCCACCGCTGCCGATCATCGGGTACGTCCTCTACCTGCGTGCCCGGACCGGGCGGTG GGACACCTACACCGAGGCGATGCGCGCCGGCTGGAACCGCGGCGTCGACTGGCCGTGGCGGGGTTGGTCGCGGACGTGGG AGTCCGCGTTCGACGGGAGCGGGGCGTCGACGTTCGTCTGGTTCTGGCGCGGGGAGCTGCTCGCCGTCGTGATCGGCGTG CTGCTGACGGGCGTGCTGCTGTGGAGCAGGCGTTGGGGCGAGGCGACCTTCGTCGGCCTGATGACCGTCCTGATGAGCTT CTCGAACTACTACGCCTCGGGGATCCGCGGGATCCTGGTCGCCTTCCCGCTGTACCTGCTGCTGGCGCGGGTGGCCGCGC GCCGGCCGTGGGTTCGCGGCGCCTACGTCTGGCTCTGCACACCGGTCATGGTGGTCTTCGTCGTTGCCTTCACCCAGGGG AAATGGGTCGACTGA
Upstream 100 bases:
>100_bases AGGATCTCGCGGGCCCCGTGGGTGACGAGCCGCGCGTCGCGGCGCCGGAGGCGTCAACCGCACCCCACTCTCCGCGGCCC GTCGACGGGCGGGAGCAGGG
Downstream 100 bases:
>100_bases CCTCGGGCGACCGCTCGCCGGGTGCCCGCCCGACCGCCCGCCGGACGGCGGCGACACGACCATCGGGATCGGATGTCGGC CCGGGCGACCGACGCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTADAPAESHAGRPAESAGHAVPGGTDPVRRVWARLPDAVQASLPVWFASRVAVMIASLAGARALSDGPAGDAPGLTTLW DRWDVGLFTKVARYGYLSPSYIDRTEVDFPGLPLAIRLVHVVVPDWIAAGLVVSFLAGTLAAAALWRLAADEVGREDARF AVVALVCFPYAVFLFAAYSEGVFLGFAVASWLAARRDRWLLSGLLGAGAASARVTGIPFCAALVVQYVLVRRAAGRPLFA PPALALALPPLPIIGYVLYLRARTGRWDTYTEAMRAGWNRGVDWPWRGWSRTWESAFDGSGASTFVWFWRGELLAVVIGV LLTGVLLWSRRWGEATFVGLMTVLMSFSNYYASGIRGILVAFPLYLLLARVAARRPWVRGAYVWLCTPVMVVFVVAFTQG KWVD
Sequences:
>Translated_404_residues MTADAPAESHAGRPAESAGHAVPGGTDPVRRVWARLPDAVQASLPVWFASRVAVMIASLAGARALSDGPAGDAPGLTTLW DRWDVGLFTKVARYGYLSPSYIDRTEVDFPGLPLAIRLVHVVVPDWIAAGLVVSFLAGTLAAAALWRLAADEVGREDARF AVVALVCFPYAVFLFAAYSEGVFLGFAVASWLAARRDRWLLSGLLGAGAASARVTGIPFCAALVVQYVLVRRAAGRPLFA PPALALALPPLPIIGYVLYLRARTGRWDTYTEAMRAGWNRGVDWPWRGWSRTWESAFDGSGASTFVWFWRGELLAVVIGV LLTGVLLWSRRWGEATFVGLMTVLMSFSNYYASGIRGILVAFPLYLLLARVAARRPWVRGAYVWLCTPVMVVFVVAFTQG KWVD >Mature_403_residues TADAPAESHAGRPAESAGHAVPGGTDPVRRVWARLPDAVQASLPVWFASRVAVMIASLAGARALSDGPAGDAPGLTTLWD RWDVGLFTKVARYGYLSPSYIDRTEVDFPGLPLAIRLVHVVVPDWIAAGLVVSFLAGTLAAAALWRLAADEVGREDARFA VVALVCFPYAVFLFAAYSEGVFLGFAVASWLAARRDRWLLSGLLGAGAASARVTGIPFCAALVVQYVLVRRAAGRPLFAP PALALALPPLPIIGYVLYLRARTGRWDTYTEAMRAGWNRGVDWPWRGWSRTWESAFDGSGASTFVWFWRGELLAVVIGVL LTGVLLWSRRWGEATFVGLMTVLMSFSNYYASGIRGILVAFPLYLLLARVAARRPWVRGAYVWLCTPVMVVFVVAFTQGK WVD
Specific function: Unknown
COG id: COG5542
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43904; Mature: 43773
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADAPAESHAGRPAESAGHAVPGGTDPVRRVWARLPDAVQASLPVWFASRVAVMIASLA CCCCCCCHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH GARALSDGPAGDAPGLTTLWDRWDVGLFTKVARYGYLSPSYIDRTEVDFPGLPLAIRLVH HHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH VVVPDWIAAGLVVSFLAGTLAAAALWRLAADEVGREDARFAVVALVCFPYAVFLFAAYSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC GVFLGFAVASWLAARRDRWLLSGLLGAGAASARVTGIPFCAALVVQYVLVRRAAGRPLFA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PPALALALPPLPIIGYVLYLRARTGRWDTYTEAMRAGWNRGVDWPWRGWSRTWESAFDGS CCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC GASTFVWFWRGELLAVVIGVLLTGVLLWSRRWGEATFVGLMTVLMSFSNYYASGIRGILV CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFPLYLLLARVAARRPWVRGAYVWLCTPVMVVFVVAFTQGKWVD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TADAPAESHAGRPAESAGHAVPGGTDPVRRVWARLPDAVQASLPVWFASRVAVMIASLA CCCCCCHHCCCCCCHHCCCCCCCCCHHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHH GARALSDGPAGDAPGLTTLWDRWDVGLFTKVARYGYLSPSYIDRTEVDFPGLPLAIRLVH HHHHCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH VVVPDWIAAGLVVSFLAGTLAAAALWRLAADEVGREDARFAVVALVCFPYAVFLFAAYSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC GVFLGFAVASWLAARRDRWLLSGLLGAGAASARVTGIPFCAALVVQYVLVRRAAGRPLFA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PPALALALPPLPIIGYVLYLRARTGRWDTYTEAMRAGWNRGVDWPWRGWSRTWESAFDGS CCHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC GASTFVWFWRGELLAVVIGVLLTGVLLWSRRWGEATFVGLMTVLMSFSNYYASGIRGILV CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AFPLYLLLARVAARRPWVRGAYVWLCTPVMVVFVVAFTQGKWVD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA