| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is tynA [H]
Identifier: 158318964
GI number: 158318964
Start: 8849522
End: 8851549
Strand: Direct
Name: tynA [H]
Synonym: Franean1_7247
Alternate gene names: 158318964
Gene position: 8849522-8851549 (Clockwise)
Preceding gene: 158318963
Following gene: 158318965
Centisome position: 98.52
GC content: 72.34
Gene sequence:
>2028_bases ATGACGGTCAGTGCGTCCCCGGAGCCCGGGACGATCCCGGCGCGACCGGCGCATCCCCTCGAACCGCTGTCGGCCGCCGA GATCGGCCGGGCCACCGCGATCCTGCGGGCGAGCGAGAAGCTCGGGCCGGAGTTTCGTTTCGTTTCCATCGAACTGAACG AGCCACCAAAAGCCGCCCTGGTGTCGCGCGAGGCCGAGCGGGACGTCGGCGACGAGCTGGCCGCGCCGGACCGGCAGGCG TTCTGCGTCCTGCACGAGCGCGGGGCGCGGCTGACCCACGAGGCCGTCGTGTCGCTGTCCGCCGGGACGGTGGTGGAGAT GTACGTGGTCCCCGGCGTGCAGGCGGCGATGATGATGGAGGAGTTCCTGGCCTGCGAGGACGTCGTCCGTGCCGACCCGC ACTGGCAGGCGGCGATGCGCAGGCGCGGGGTCACCGACTTCTCCCTCGCGATGATCGACCCGTGGTCCGCGGGCTACACC GGGCGTGAGGACGACCCTGCCCGGCGGCGCATCGCGCGCCCGGTGACGTTCGTCCGCTCCGGGCCCGGCGAGAACGGCTA CGCCCGGCCCGCGGAGGGACTGCAGGTCGTCGTCGACCTCGAGGCGATGGCCGTCGTCGACGTGACCGACCACGGCCAGG GCCCGGACGGCCCTGTGCCGCTGCCGCCGCGCCCCGGCAACTACGCACCGGCGCTGATGACGGCCGCCCCGGAGAACGTC CCCGCGTTCGACCGGCTGCGCGACGACCTGCGCCCGATCGAGGTCACCCAACCGCGCGGCGCCAGCTTCACCGTGGACGG GTACGCCGTCCGGTGGCAGAAGTGGGACCTGCGCATCGGTTTCACCCCGCGCGAGGGCCTCATCCTGCACCAGGTCGCGT ACACCGACCGGGGCCGGCGGCGGCCGATCCTGCAACGCGCGTCGGTGTCGGAGATGTTCGTCCCGTACGGCGACCCGGCG CCGACGCACCGGGTGAAGAACGTCTTCGACATGGGCGAGTACGGGGTCGGGGTGACGGCCAACTCGCTGCGGCTCGGCTG CGACTGCCTCGGCGACATCCGGTACTTCGACGGGGTCGTGAACGACTCCGACGGCAACCCGGTGACGATCCCGAACGCGG TGTGCCTGCACGAGGAGGACACCGGAATCGCCTGGAAGCACACCGACTTCCGGACCGGCCAGGTCGAGGTCCGGCGGATG CGCCGGCTGGTGATCTCGATGATCTGCACGGTCGGCAACTACGAGTACGGCTACTTCTGGTACCTCTATCTGGACGGCAC CATCGAGTTCGAGGTGAAGCTGACCGGGGTCATCTCCACCGGGGCGGTGCGGCCGGGCGAGTCGCCGTCGCACGGGGTGC TCGTGGCGCCCGGCCTGTACGGGCCGCATCACCAGCACTTCTTCAACGTGCGCCTGGACCTGGAGCTCGACGGCGGCCCG AACTCGGTGCACGAGATCGACTCGGTGCCCGACCCCATCGGCCCGGACAACCCGACGGGCGTCGCCTGGCGGACCCAGGA CACGCTGCTGGACTCGGAGCGCCACGCCCAGCGCAGGGTCGACCCGTCCGTCGCGCGGTTCTGGCGGATCACCAACCCGC GCGTCGAGGGCCCGCTCGGCCGCCCGGTGGCCTACCGGCTCGTCCCGGGACACACGGCGCCGTTGCTGGCGCATCCCGAC TCGCACCAGGCGGCGCGCGGGCGGTTCGCGTCCCGCAACCTGTGGGTGACCGCGTACGACGAGCGGGAGCGGTACGCCGC CGGCCGCTACCCGAACCAGAACGCGGGCAACGAGGGCCTGCCGCAGTACGCGGCCGCGGACCGGCCGGTCGCCGACACCG ACATCGTCGTCTGGTACAGCTTCGGGGCGCACCACGTCGTGCGCCCGGAGGACTGGCCGGTGATGCCGGTCAGCCGGATC GGCTTCGAGCTGCGCCCGGACGGCTTCTTCGACGGCAACCCGGCCCTCGACCTGCCCCCGTCCGGGCACGTCGGTGGGGC CGCGGACAGGCCCGGTCGTGCTGTTTAG
Upstream 100 bases:
>100_bases GAACGGGCCGCCGATGGCCCGCGTTCGGCGACCTCTACTTTTGGGTGGCCCAGTCCCTTGCGTGCCGGGTCACGCACCCG AGATGTTGGTGGAGTTCGCC
Downstream 100 bases:
>100_bases CCGGGGCGTCGGCGGGCGGGCGCGCACGCGACACGCCCCGGCTGGAAGGGACGGCTTGCCCCGGAACGGGGGTAGCTGCC CTAGGCTCCCGGAGTTGTGA
Product: tyramine oxidase
Products: NA
Alternate protein names: Copper amine oxidase; MAOXI [H]
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MTVSASPEPGTIPARPAHPLEPLSAAEIGRATAILRASEKLGPEFRFVSIELNEPPKAALVSREAERDVGDELAAPDRQA FCVLHERGARLTHEAVVSLSAGTVVEMYVVPGVQAAMMMEEFLACEDVVRADPHWQAAMRRRGVTDFSLAMIDPWSAGYT GREDDPARRRIARPVTFVRSGPGENGYARPAEGLQVVVDLEAMAVVDVTDHGQGPDGPVPLPPRPGNYAPALMTAAPENV PAFDRLRDDLRPIEVTQPRGASFTVDGYAVRWQKWDLRIGFTPREGLILHQVAYTDRGRRRPILQRASVSEMFVPYGDPA PTHRVKNVFDMGEYGVGVTANSLRLGCDCLGDIRYFDGVVNDSDGNPVTIPNAVCLHEEDTGIAWKHTDFRTGQVEVRRM RRLVISMICTVGNYEYGYFWYLYLDGTIEFEVKLTGVISTGAVRPGESPSHGVLVAPGLYGPHHQHFFNVRLDLELDGGP NSVHEIDSVPDPIGPDNPTGVAWRTQDTLLDSERHAQRRVDPSVARFWRITNPRVEGPLGRPVAYRLVPGHTAPLLAHPD SHQAARGRFASRNLWVTAYDERERYAAGRYPNQNAGNEGLPQYAAADRPVADTDIVVWYSFGAHHVVRPEDWPVMPVSRI GFELRPDGFFDGNPALDLPPSGHVGGAADRPGRAV
Sequences:
>Translated_675_residues MTVSASPEPGTIPARPAHPLEPLSAAEIGRATAILRASEKLGPEFRFVSIELNEPPKAALVSREAERDVGDELAAPDRQA FCVLHERGARLTHEAVVSLSAGTVVEMYVVPGVQAAMMMEEFLACEDVVRADPHWQAAMRRRGVTDFSLAMIDPWSAGYT GREDDPARRRIARPVTFVRSGPGENGYARPAEGLQVVVDLEAMAVVDVTDHGQGPDGPVPLPPRPGNYAPALMTAAPENV PAFDRLRDDLRPIEVTQPRGASFTVDGYAVRWQKWDLRIGFTPREGLILHQVAYTDRGRRRPILQRASVSEMFVPYGDPA PTHRVKNVFDMGEYGVGVTANSLRLGCDCLGDIRYFDGVVNDSDGNPVTIPNAVCLHEEDTGIAWKHTDFRTGQVEVRRM RRLVISMICTVGNYEYGYFWYLYLDGTIEFEVKLTGVISTGAVRPGESPSHGVLVAPGLYGPHHQHFFNVRLDLELDGGP NSVHEIDSVPDPIGPDNPTGVAWRTQDTLLDSERHAQRRVDPSVARFWRITNPRVEGPLGRPVAYRLVPGHTAPLLAHPD SHQAARGRFASRNLWVTAYDERERYAAGRYPNQNAGNEGLPQYAAADRPVADTDIVVWYSFGAHHVVRPEDWPVMPVSRI GFELRPDGFFDGNPALDLPPSGHVGGAADRPGRAV >Mature_674_residues TVSASPEPGTIPARPAHPLEPLSAAEIGRATAILRASEKLGPEFRFVSIELNEPPKAALVSREAERDVGDELAAPDRQAF CVLHERGARLTHEAVVSLSAGTVVEMYVVPGVQAAMMMEEFLACEDVVRADPHWQAAMRRRGVTDFSLAMIDPWSAGYTG REDDPARRRIARPVTFVRSGPGENGYARPAEGLQVVVDLEAMAVVDVTDHGQGPDGPVPLPPRPGNYAPALMTAAPENVP AFDRLRDDLRPIEVTQPRGASFTVDGYAVRWQKWDLRIGFTPREGLILHQVAYTDRGRRRPILQRASVSEMFVPYGDPAP THRVKNVFDMGEYGVGVTANSLRLGCDCLGDIRYFDGVVNDSDGNPVTIPNAVCLHEEDTGIAWKHTDFRTGQVEVRRMR RLVISMICTVGNYEYGYFWYLYLDGTIEFEVKLTGVISTGAVRPGESPSHGVLVAPGLYGPHHQHFFNVRLDLELDGGPN SVHEIDSVPDPIGPDNPTGVAWRTQDTLLDSERHAQRRVDPSVARFWRITNPRVEGPLGRPVAYRLVPGHTAPLLAHPDS HQAARGRFASRNLWVTAYDERERYAAGRYPNQNAGNEGLPQYAAADRPVADTDIVVWYSFGAHHVVRPEDWPVMPVSRIG FELRPDGFFDGNPALDLPPSGHVGGAADRPGRAV
Specific function: The exact function of maoXI is not known [H]
COG id: COG3733
COG function: function code Q; Cu2+-containing amine oxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the copper/topaquinone oxidase family [H]
Homologues:
Organism=Homo sapiens, GI73486661, Length=415, Percent_Identity=26.9879518072289, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI60498984, Length=434, Percent_Identity=28.110599078341, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI60498982, Length=430, Percent_Identity=27.6744186046512, Blast_Score=102, Evalue=2e-21, Organism=Homo sapiens, GI4502119, Length=426, Percent_Identity=27.9342723004695, Blast_Score=100, Evalue=9e-21, Organism=Escherichia coli, GI1787651, Length=660, Percent_Identity=30.1515151515152, Blast_Score=329, Evalue=4e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000269 - InterPro: IPR015798 - InterPro: IPR016182 - InterPro: IPR015800 - InterPro: IPR015801 - InterPro: IPR015802 [H]
Pfam domain/function: PF01179 Cu_amine_oxid; PF02727 Cu_amine_oxidN2; PF02728 Cu_amine_oxidN3 [H]
EC number: =1.4.3.21 [H]
Molecular weight: Translated: 74231; Mature: 74100
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS01164 COPPER_AMINE_OXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSASPEPGTIPARPAHPLEPLSAAEIGRATAILRASEKLGPEFRFVSIELNEPPKAAL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHCCCCEEEEEEEECCCCCHHH VSREAERDVGDELAAPDRQAFCVLHERGARLTHEAVVSLSAGTVVEMYVVPGVQAAMMME HHCHHHHCCCHHHCCCCCCEEEEEECCCCCEEEHHHEEECCCCEEEEEEECCCHHHHHHH EFLACEDVVRADPHWQAAMRRRGVTDFSLAMIDPWSAGYTGREDDPARRRIARPVTFVRS HHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEEC GPGENGYARPAEGLQVVVDLEAMAVVDVTDHGQGPDGPVPLPPRPGNYAPALMTAAPENV CCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC PAFDRLRDDLRPIEVTQPRGASFTVDGYAVRWQKWDLRIGFTPREGLILHQVAYTDRGRR CHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC RPILQRASVSEMFVPYGDPAPTHRVKNVFDMGEYGVGVTANSLRLGCDCLGDIRYFDGVV CCHHHHCCHHHEEECCCCCCCHHHHHHHHHCCCCCCCEECCCEEECCHHHHCHHHHCCEE NDSDGNPVTIPNAVCLHEEDTGIAWKHTDFRTGQVEVRRMRRLVISMICTVGNYEYGYFW ECCCCCEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE YLYLDGTIEFEVKLTGVISTGAVRPGESPSHGVLVAPGLYGPHHQHFFNVRLDLELDGGP EEEECCEEEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCC NSVHEIDSVPDPIGPDNPTGVAWRTQDTLLDSERHAQRRVDPSVARFWRITNPRVEGPLG CCHHHHHCCCCCCCCCCCCCEEEECHHHHHCCHHHHHHCCCHHHHHHEEECCCCCCCCCC RPVAYRLVPGHTAPLLAHPDSHQAARGRFASRNLWVTAYDERERYAAGRYPNQNAGNEGL CCEEEEEECCCCCCEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCC PQYAAADRPVADTDIVVWYSFGAHHVVRPEDWPVMPVSRIGFELRPDGFFDGNPALDLPP CCHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHCCEEECCCCCCCCCCCCCCCC SGHVGGAADRPGRAV CCCCCCCCCCCCCCC >Mature Secondary Structure TVSASPEPGTIPARPAHPLEPLSAAEIGRATAILRASEKLGPEFRFVSIELNEPPKAAL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEHHHHCCCCEEEEEEEECCCCCHHH VSREAERDVGDELAAPDRQAFCVLHERGARLTHEAVVSLSAGTVVEMYVVPGVQAAMMME HHCHHHHCCCHHHCCCCCCEEEEEECCCCCEEEHHHEEECCCCEEEEEEECCCHHHHHHH EFLACEDVVRADPHWQAAMRRRGVTDFSLAMIDPWSAGYTGREDDPARRRIARPVTFVRS HHHHHHHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEEC GPGENGYARPAEGLQVVVDLEAMAVVDVTDHGQGPDGPVPLPPRPGNYAPALMTAAPENV CCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCC PAFDRLRDDLRPIEVTQPRGASFTVDGYAVRWQKWDLRIGFTPREGLILHQVAYTDRGRR CHHHHHHHCCCCEEEECCCCCEEEECCEEEEEEEEEEEEECCCCCCEEEEEEECCCCCCC RPILQRASVSEMFVPYGDPAPTHRVKNVFDMGEYGVGVTANSLRLGCDCLGDIRYFDGVV CCHHHHCCHHHEEECCCCCCCHHHHHHHHHCCCCCCCEECCCEEECCHHHHCHHHHCCEE NDSDGNPVTIPNAVCLHEEDTGIAWKHTDFRTGQVEVRRMRRLVISMICTVGNYEYGYFW ECCCCCEEECCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE YLYLDGTIEFEVKLTGVISTGAVRPGESPSHGVLVAPGLYGPHHQHFFNVRLDLELDGGP EEEECCEEEEEEEEEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEECCCC NSVHEIDSVPDPIGPDNPTGVAWRTQDTLLDSERHAQRRVDPSVARFWRITNPRVEGPLG CCHHHHHCCCCCCCCCCCCCEEEECHHHHHCCHHHHHHCCCHHHHHHEEECCCCCCCCCC RPVAYRLVPGHTAPLLAHPDSHQAARGRFASRNLWVTAYDERERYAAGRYPNQNAGNEGL CCEEEEEECCCCCCEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCCCC PQYAAADRPVADTDIVVWYSFGAHHVVRPEDWPVMPVSRIGFELRPDGFFDGNPALDLPP CCHHCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCHHHCCEEECCCCCCCCCCCCCCCC SGHVGGAADRPGRAV CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366046 [H]