| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318951
Identifier: 158318951
GI number: 158318951
Start: 8832521
End: 8833903
Strand: Direct
Name: 158318951
Synonym: Franean1_7234
Alternate gene names: NA
Gene position: 8832521-8833903 (Clockwise)
Preceding gene: 158318949
Following gene: 158318952
Centisome position: 98.34
GC content: 77.08
Gene sequence:
>1383_bases ATGGACCCGCGGTCAGAGGCTTCCTGCTGTGCTGTCGCGATGACGCAGGCGGTGCAGTGGGATCAGGGCGTCTCGGACGC GTGGTCACGGATCGCGCAGATCGGTCCCAAGATCCTGGTCTTCGCGCTCGTCCTCACCGTCGGAGCCGTGGTCGTCCGCG GCGCGCTCCACGCCGCGGACCGGGTGCTGGAGCAGGCCGGCCTCGACGGCGCGCTCGACCGGGCCGGCGCGTCGCGGCTG CTGCGCTGCCAGACCGGGGTGATCAGGGGATGGCTGCTGCGGGTGGTGGCCGTGATCTGCCTGTTGGCCATCCTGCGTGC GGCGCTCGGGGTGTTCGGGCCGAGTCCCGCCGACCGGATGGCCGGCACAGCGCTGGCGCTGCTCGCCCGCGCGCTGCTCG CGGCCGTCATCGCGCTGCTCGGGCTGGCGCTGGCCGCCTGGGCGCGGCGCCTGGTCACCGAGTCGTTCGCCGGGCTGCGG CACGGCAACGCGCTGAGCCGGGCCGTTGCCGGGTTCGCCGTCCTCGCCTTCGGCAAGGCGGCGCTGGACGAGCTCGGCAT CGGGACGTCGGTCACCACACCACTGCTCTACGCAGTGCTCGCGGCCTGCACCGGAGTGGTGGTGGTCGGAGTGGGCGGCG GTCTCGTCCGGCCGATGCAGAGCCGCTGGGAGAAGATCCTCGACCGGGCCGAGGACGGCGCCGGAGAGGCCCGCGCCGCC TGGCACGCGAACCGGGGCGCGGCGCGGTGGGCACCGCCGAGCAGCGCCGGCCAGAGCCCCCCGGGACGGCCGTCCACACC GCCCGGCGGCACGCCCCCACCACCCGCGCCAGCCAGCCGTGACACAGCCACGCCGCCCTGCGGCACGCCCATGGCACCCC TCGGTGAGCCGGGGCCGGACCGCGGCGTGCCCGTACCCGACCCGGGTACGGCGGTGGCACGCCGCACCGCGCCTCAGACG CGCCCGCACCCGGGGCCAGCGACGGAACCGGCGTCCGTGCCCACGCCGACTCCGGTGCCGCCGCGGGCGCCGGCGCCCAC ACCGGCGGCGGCGCCGGCACCGCGGCACCCGCCCGTCCCGCTACCGGGCGAGCGGGGAACGGCGTCGGAGCGGCGTCGGA CCCCGGCGCCGTCAGCGGTACCCGTGCCACCGCCCCCGCCGCGATCGGCTCCGCCGAGCACAGCACGGCCTGGAGCGTCC TCCCCGCCGGGAGCGCTACCGCGGGCCCCCTCGGCGGCCGACGTGCCGGGACGGGTACCGTCCACGGATCCCGCACCCGC GTCGCCACGCACAACCCTGCCATCGCCGTCGGTGCTCCCCGGCACGCCACCGACATCCCCTGTTCGGGGGGAGGACCAGC TCCCCGGCACTGTTTCCGACTGA
Upstream 100 bases:
>100_bases GCCTGCGTCGAGGGGGGCGAGCTCATCCGACGGACGGTAGCCCGTCACCACGGGTAACCAACGGAGACCACTCCGATGTC ACGCGAGGTCACGGCGTGGC
Downstream 100 bases:
>100_bases CGTGTGGGTGTGCGTTCGGCGAACTGCGACGCGCCGCGCCGCCGGGTGGGGCACTCTGGGAAGGGAAGACTTCGGGTGGC GGCGCGGCGTCGGCGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MDPRSEASCCAVAMTQAVQWDQGVSDAWSRIAQIGPKILVFALVLTVGAVVVRGALHAADRVLEQAGLDGALDRAGASRL LRCQTGVIRGWLLRVVAVICLLAILRAALGVFGPSPADRMAGTALALLARALLAAVIALLGLALAAWARRLVTESFAGLR HGNALSRAVAGFAVLAFGKAALDELGIGTSVTTPLLYAVLAACTGVVVVGVGGGLVRPMQSRWEKILDRAEDGAGEARAA WHANRGAARWAPPSSAGQSPPGRPSTPPGGTPPPPAPASRDTATPPCGTPMAPLGEPGPDRGVPVPDPGTAVARRTAPQT RPHPGPATEPASVPTPTPVPPRAPAPTPAAAPAPRHPPVPLPGERGTASERRRTPAPSAVPVPPPPPRSAPPSTARPGAS SPPGALPRAPSAADVPGRVPSTDPAPASPRTTLPSPSVLPGTPPTSPVRGEDQLPGTVSD
Sequences:
>Translated_460_residues MDPRSEASCCAVAMTQAVQWDQGVSDAWSRIAQIGPKILVFALVLTVGAVVVRGALHAADRVLEQAGLDGALDRAGASRL LRCQTGVIRGWLLRVVAVICLLAILRAALGVFGPSPADRMAGTALALLARALLAAVIALLGLALAAWARRLVTESFAGLR HGNALSRAVAGFAVLAFGKAALDELGIGTSVTTPLLYAVLAACTGVVVVGVGGGLVRPMQSRWEKILDRAEDGAGEARAA WHANRGAARWAPPSSAGQSPPGRPSTPPGGTPPPPAPASRDTATPPCGTPMAPLGEPGPDRGVPVPDPGTAVARRTAPQT RPHPGPATEPASVPTPTPVPPRAPAPTPAAAPAPRHPPVPLPGERGTASERRRTPAPSAVPVPPPPPRSAPPSTARPGAS SPPGALPRAPSAADVPGRVPSTDPAPASPRTTLPSPSVLPGTPPTSPVRGEDQLPGTVSD >Mature_460_residues MDPRSEASCCAVAMTQAVQWDQGVSDAWSRIAQIGPKILVFALVLTVGAVVVRGALHAADRVLEQAGLDGALDRAGASRL LRCQTGVIRGWLLRVVAVICLLAILRAALGVFGPSPADRMAGTALALLARALLAAVIALLGLALAAWARRLVTESFAGLR HGNALSRAVAGFAVLAFGKAALDELGIGTSVTTPLLYAVLAACTGVVVVGVGGGLVRPMQSRWEKILDRAEDGAGEARAA WHANRGAARWAPPSSAGQSPPGRPSTPPGGTPPPPAPASRDTATPPCGTPMAPLGEPGPDRGVPVPDPGTAVARRTAPQT RPHPGPATEPASVPTPTPVPPRAPAPTPAAAPAPRHPPVPLPGERGTASERRRTPAPSAVPVPPPPPRSAPPSTARPGAS SPPGALPRAPSAADVPGRVPSTDPAPASPRTTLPSPSVLPGTPPTSPVRGEDQLPGTVSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46354; Mature: 46354
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPRSEASCCAVAMTQAVQWDQGVSDAWSRIAQIGPKILVFALVLTVGAVVVRGALHAAD CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLEQAGLDGALDRAGASRLLRCQTGVIRGWLLRVVAVICLLAILRAALGVFGPSPADRM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGTALALLARALLAAVIALLGLALAAWARRLVTESFAGLRHGNALSRAVAGFAVLAFGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALDELGIGTSVTTPLLYAVLAACTGVVVVGVGGGLVRPMQSRWEKILDRAEDGAGEARAA HHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH WHANRGAARWAPPSSAGQSPPGRPSTPPGGTPPPPAPASRDTATPPCGTPMAPLGEPGPD HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGVPVPDPGTAVARRTAPQTRPHPGPATEPASVPTPTPVPPRAPAPTPAAAPAPRHPPVP CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGERGTASERRRTPAPSAVPVPPPPPRSAPPSTARPGASSPPGALPRAPSAADVPGRVP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STDPAPASPRTTLPSPSVLPGTPPTSPVRGEDQLPGTVSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPRSEASCCAVAMTQAVQWDQGVSDAWSRIAQIGPKILVFALVLTVGAVVVRGALHAAD CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVLEQAGLDGALDRAGASRLLRCQTGVIRGWLLRVVAVICLLAILRAALGVFGPSPADRM HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH AGTALALLARALLAAVIALLGLALAAWARRLVTESFAGLRHGNALSRAVAGFAVLAFGKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH ALDELGIGTSVTTPLLYAVLAACTGVVVVGVGGGLVRPMQSRWEKILDRAEDGAGEARAA HHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH WHANRGAARWAPPSSAGQSPPGRPSTPPGGTPPPPAPASRDTATPPCGTPMAPLGEPGPD HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGVPVPDPGTAVARRTAPQTRPHPGPATEPASVPTPTPVPPRAPAPTPAAAPAPRHPPVP CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LPGERGTASERRRTPAPSAVPVPPPPPRSAPPSTARPGASSPPGALPRAPSAADVPGRVP CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC STDPAPASPRTTLPSPSVLPGTPPTSPVRGEDQLPGTVSD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA