| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318923
Identifier: 158318923
GI number: 158318923
Start: 8798683
End: 8799513
Strand: Reverse
Name: 158318923
Synonym: Franean1_7206
Alternate gene names: NA
Gene position: 8799513-8798683 (Counterclockwise)
Preceding gene: 158318926
Following gene: 158318922
Centisome position: 97.97
GC content: 71.36
Gene sequence:
>831_bases GTGGCTGTCGTCTCACCCGCTGCCTACCTGCGGGTCTACGAGCCATTGGCCGCCTTCCCGCCCGCGGACCGCGTCCGTTG GCAGCGGTACGCGGCCTCGGGGCCGCCCTCGCGGCGCGCGGGCGCCCGGCGGGAGCGGGTCGTGGCGCTGGTGGCGGCCG TCCGGCCGTCGCTGGACGTCGCCGACGAGTCCGCCTTCGTCCAGTGGGCGGACGGCCTGATGTTCGTCTGCCCGTGGTCG ACGCAGCTGCGGGTGTGGCAGGCGGCGATGGAGTTCCGCGGGCTGATGCCGGAGCGCGTCGCCGAGGCCTTCCTCCCGCG CCGGCTGGTGGACCCGGCGGAGACAGAGCTCGACCGGTGGAAGGCGCGCCGGCCCGAGATCAAGGTCCATGTCCAGACCT GCACCTGGATGGTGCCGCCGACCTGGTTCGTACTGTTCGACCCAGCGGAGCGGGCGTTGGTCACCGGCGACAGCGCCGAC CGTTCCATGGTCTACCGGACCACGATGAGCCTTGCCCGCCGCCGGGTCGGCCGCGCGGTGGAGGCGATGGAGACCCTCCG GGCGGCGAACACCGACGCCCCCGCGATCGAGGGCGTCGCCGAGCTGGCCCGTTGGCTGGGGTCCTTCCATCCGCAGAGCA GGGTCGAACTGGACTACGACGGGCTAGTTGACCTGCTGGACGACGACATGCTGCGGCGGGACACATCCGTCGAGGACATC GTCGAGGCGGTCAGCGCGTTACGCCGTGGGCGAACAGACCTTGCGGTCGAGGCGTACGAACGAGTGCTGATCAGGTGGAG ACCCCTGCAGTCACGGGAATCTGCCAGTTGA
Upstream 100 bases:
>100_bases TCCGCACCTGTTCCGGCCCTCTGCGGGGGGTCGGCGTCCGTGGCGATCCCGCTGCCGGCGGGCATCGCGGGTGACGCCGC CGTCGAGGCCGGTGTCTAGC
Downstream 100 bases:
>100_bases TCGGCGCCGCCTGTTAGCGCAGCGTTGCCCTCCGCTTCGGACGAGCTGTGACTAGTCAGCAGATGGTCCTGACGTGCCAT GTCCGAAATGCCCCCGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MAVVSPAAYLRVYEPLAAFPPADRVRWQRYAASGPPSRRAGARRERVVALVAAVRPSLDVADESAFVQWADGLMFVCPWS TQLRVWQAAMEFRGLMPERVAEAFLPRRLVDPAETELDRWKARRPEIKVHVQTCTWMVPPTWFVLFDPAERALVTGDSAD RSMVYRTTMSLARRRVGRAVEAMETLRAANTDAPAIEGVAELARWLGSFHPQSRVELDYDGLVDLLDDDMLRRDTSVEDI VEAVSALRRGRTDLAVEAYERVLIRWRPLQSRESAS
Sequences:
>Translated_276_residues MAVVSPAAYLRVYEPLAAFPPADRVRWQRYAASGPPSRRAGARRERVVALVAAVRPSLDVADESAFVQWADGLMFVCPWS TQLRVWQAAMEFRGLMPERVAEAFLPRRLVDPAETELDRWKARRPEIKVHVQTCTWMVPPTWFVLFDPAERALVTGDSAD RSMVYRTTMSLARRRVGRAVEAMETLRAANTDAPAIEGVAELARWLGSFHPQSRVELDYDGLVDLLDDDMLRRDTSVEDI VEAVSALRRGRTDLAVEAYERVLIRWRPLQSRESAS >Mature_275_residues AVVSPAAYLRVYEPLAAFPPADRVRWQRYAASGPPSRRAGARRERVVALVAAVRPSLDVADESAFVQWADGLMFVCPWST QLRVWQAAMEFRGLMPERVAEAFLPRRLVDPAETELDRWKARRPEIKVHVQTCTWMVPPTWFVLFDPAERALVTGDSADR SMVYRTTMSLARRRVGRAVEAMETLRAANTDAPAIEGVAELARWLGSFHPQSRVELDYDGLVDLLDDDMLRRDTSVEDIV EAVSALRRGRTDLAVEAYERVLIRWRPLQSRESAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31280; Mature: 31149
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVSPAAYLRVYEPLAAFPPADRVRWQRYAASGPPSRRAGARRERVVALVAAVRPSLDV CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCC ADESAFVQWADGLMFVCPWSTQLRVWQAAMEFRGLMPERVAEAFLPRRLVDPAETELDRW CCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH KARRPEIKVHVQTCTWMVPPTWFVLFDPAERALVTGDSADRSMVYRTTMSLARRRVGRAV HCCCCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EAMETLRAANTDAPAIEGVAELARWLGSFHPQSRVELDYDGLVDLLDDDMLRRDTSVEDI HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHH VEAVSALRRGRTDLAVEAYERVLIRWRPLQSRESAS HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AVVSPAAYLRVYEPLAAFPPADRVRWQRYAASGPPSRRAGARRERVVALVAAVRPSLDV CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCC ADESAFVQWADGLMFVCPWSTQLRVWQAAMEFRGLMPERVAEAFLPRRLVDPAETELDRW CCCHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHH KARRPEIKVHVQTCTWMVPPTWFVLFDPAERALVTGDSADRSMVYRTTMSLARRRVGRAV HCCCCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHH EAMETLRAANTDAPAIEGVAELARWLGSFHPQSRVELDYDGLVDLLDDDMLRRDTSVEDI HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHH VEAVSALRRGRTDLAVEAYERVLIRWRPLQSRESAS HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7928973 [H]