| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318918
Identifier: 158318918
GI number: 158318918
Start: 8793351
End: 8794082
Strand: Reverse
Name: 158318918
Synonym: Franean1_7201
Alternate gene names: NA
Gene position: 8794082-8793351 (Counterclockwise)
Preceding gene: 158318921
Following gene: 158318917
Centisome position: 97.91
GC content: 70.77
Gene sequence:
>732_bases GTGCCTTTCACGTTGAGTCATCCCGTCGCGGTGCTGCCGTTGCGGCGGCTCGGGCTGCCGATGAGTGCGATGGTGGCCGG GTCGATGGTTCCTGATGTGCCCGTGTTCCTCGGGTGGTCGGCGATGTACCACCTCAGCCACAGTCTGCTCGGTGTCGTGA CCTTCGTTCCGCTGCTGTCGCTGGTCGCGTTGGGCATCTGGTTCTGCCTGGCTCGCGATGCCCTGCTCGATCTGGCTCCG GATCCGGTCAGGCTGCGGCTGCCTCCCCGGGCACGGCCCACGGGACATCAGTGGCTGCTGGCCCCGGTGGCCGCGGTCGT CGGAGGCCTGACGCACACCGGGTGGGACGCCTTCACGCACGAAGACCGGTGGGGTGTCCGTCATGTGGCCTGGCTGAGCG CCGACCACGGAGCCCTGCCCGGCTACAAGTGGCTTCAGTACTGCATGGGCGCGGCCGGGCTGGTCGTTGTCGCGGCGGCT GTCGTCGTCCACCTGCGGGCGCTGCCACGGGGACCGCGGCGGCCACGGCGGTACTCGGCGGAGGCGGCGATTCTTCCGGC GGTGGTGGCCCTGGCGGCGGGGGTCGGCGCTGTCGTCGGCCTGGCGCAGGCGTCGAACGGGCTGCATGCCGTCGCCTTCC GCGGCGTCGTCACCGGTGTGATCGCGCTGGTAGCGGGCCTGTTCCTGGTCGCCGCCGGATGGTGGGCATCGGGACGCACA CTAGAGCGATGA
Upstream 100 bases:
>100_bases GTGCACTGGTCACGGTTCGCCCTGAAACGAGTTGTGCCAGGGGTGTACGGGCCGGACGGCAGGGAGTGACCTGACCCGCG CGGGACCGTGGGAGGAGACT
Downstream 100 bases:
>100_bases CCACGCCAGCCGAGACGTTCGCCGTGGTGGACGAGTACGTCCGCGTGGCGCCGGTGCCCGCGTTGCGCCCGTACATCGCC TGGTACAGCGGCTACCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MPFTLSHPVAVLPLRRLGLPMSAMVAGSMVPDVPVFLGWSAMYHLSHSLLGVVTFVPLLSLVALGIWFCLARDALLDLAP DPVRLRLPPRARPTGHQWLLAPVAAVVGGLTHTGWDAFTHEDRWGVRHVAWLSADHGALPGYKWLQYCMGAAGLVVVAAA VVVHLRALPRGPRRPRRYSAEAAILPAVVALAAGVGAVVGLAQASNGLHAVAFRGVVTGVIALVAGLFLVAAGWWASGRT LER
Sequences:
>Translated_243_residues MPFTLSHPVAVLPLRRLGLPMSAMVAGSMVPDVPVFLGWSAMYHLSHSLLGVVTFVPLLSLVALGIWFCLARDALLDLAP DPVRLRLPPRARPTGHQWLLAPVAAVVGGLTHTGWDAFTHEDRWGVRHVAWLSADHGALPGYKWLQYCMGAAGLVVVAAA VVVHLRALPRGPRRPRRYSAEAAILPAVVALAAGVGAVVGLAQASNGLHAVAFRGVVTGVIALVAGLFLVAAGWWASGRT LER >Mature_242_residues PFTLSHPVAVLPLRRLGLPMSAMVAGSMVPDVPVFLGWSAMYHLSHSLLGVVTFVPLLSLVALGIWFCLARDALLDLAPD PVRLRLPPRARPTGHQWLLAPVAAVVGGLTHTGWDAFTHEDRWGVRHVAWLSADHGALPGYKWLQYCMGAAGLVVVAAAV VVHLRALPRGPRRPRRYSAEAAILPAVVALAAGVGAVVGLAQASNGLHAVAFRGVVTGVIALVAGLFLVAAGWWASGRTL ER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25714; Mature: 25583
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTLSHPVAVLPLRRLGLPMSAMVAGSMVPDVPVFLGWSAMYHLSHSLLGVVTFVPLLS CCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVALGIWFCLARDALLDLAPDPVRLRLPPRARPTGHQWLLAPVAAVVGGLTHTGWDAFTH HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC EDRWGVRHVAWLSADHGALPGYKWLQYCMGAAGLVVVAAAVVVHLRALPRGPRRPRRYSA CCCCCHHHHEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC EAAILPAVVALAAGVGAVVGLAQASNGLHAVAFRGVVTGVIALVAGLFLVAAGWWASGRT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LER CCC >Mature Secondary Structure PFTLSHPVAVLPLRRLGLPMSAMVAGSMVPDVPVFLGWSAMYHLSHSLLGVVTFVPLLS CCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVALGIWFCLARDALLDLAPDPVRLRLPPRARPTGHQWLLAPVAAVVGGLTHTGWDAFTH HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC EDRWGVRHVAWLSADHGALPGYKWLQYCMGAAGLVVVAAAVVVHLRALPRGPRRPRRYSA CCCCCHHHHEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC EAAILPAVVALAAGVGAVVGLAQASNGLHAVAFRGVVTGVIALVAGLFLVAAGWWASGRT HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC LER CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA