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The map label for this gene is rhaR [C]

Identifier: 158318917

GI number: 158318917

Start: 8792461

End: 8793354

Strand: Reverse

Name: rhaR [C]

Synonym: Franean1_7200

Alternate gene names: 158318917

Gene position: 8793354-8792461 (Counterclockwise)

Preceding gene: 158318918

Following gene: 158318910

Centisome position: 97.9

GC content: 72.48

Gene sequence:

>894_bases
ATGACCACGCCAGCCGAGACGTTCGCCGTGGTGGACGAGTACGTCCGCGTGGCGCCGGTGCCCGCGTTGCGCCCGTACAT
CGCCTGGTACAGCGGCTACCGCCAGCGTGGGGTCGCACCTGCCCTGCACCGCGGCCTGCCCTCGCCGTACCTGACTCTGA
TCTTCGCCCTGGACGAGCCGCTGATCGTTGTCGGCCACCCTGATCCGCATCAGGCGCCGGGCAGCTACGACACGCTGCTC
GGCGGACTGCACACCTCGCCGGCGTTGATCTCACACGACGGCGCCCAGTCGGGAGTGCAGGTCGCGCTGCGGCCGCTCGG
GGCGAGGGCGCTCCTCGGCCTGCCCGCGGGTGAACTTGCCGACCAGGACCTTCCAGCGGATGCGGTCCTCGGCGACGTGT
GTGCGGAGATGAGGGAGCGGATGCGGGCCGCCTCCGGCTGGGTGGAACTGTTCGCGGTGCTGGACGACATCCTGTGTCGG
CGGGCCGCGTGCCGGACGTCGGCGGTCGCGCCGGAGATCGCCGAGGCATGGGCGATGCTGGAGCGTGCCCGAGGCTCCGT
CTCGGTGGTGGACCTGGCGGCCGAGGTCGGATGGAGCGCACGTCACCTGCGGAGCCGGTTCCGGACCGAGATCGGCCTGA
CACCGAAGGCGGCGTCCCGGGTCATCCGGTTCGACCACGCCCGCCGTCTGCTCGCCCGGCGTGCCGTGGCCGGGGACACG
GGGGAGCTCACCTTGGCGGACCTGGCGGCCGGTTGTGGATTCTTCGATCAGGCACACCTGGCACGCGAGTTTCGCGCGCT
GGCCGGGGTGCCGCCGAGCCGCTGGCTCGCGGAGGAGGCGGGCTACCCGCCGACCGGTCGGCGGGCGCGGGCCGAGAACA
CCGGGACGAAATAG

Upstream 100 bases:

>100_bases
CCGTCGCCTTCCGCGGCGTCGTCACCGGTGTGATCGCGCTGGTAGCGGGCCTGTTCCTGGTCGCCGCCGGATGGTGGGCA
TCGGGACGCACACTAGAGCG

Downstream 100 bases:

>100_bases
GTCGGGCGGTCGGTGGCGGCGTCCAGTTCGGCGAACGCCCTCTCCCAGCGTTCGACATCGTCGCTGTCGGCGTGTCCGGC
GGCCGTCATCGCCGGTACAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; AraC Family Transcription Regulator; Helix-Turn-Helix AraC Domain Protein; Transcriptional Regulator AraC; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTTPAETFAVVDEYVRVAPVPALRPYIAWYSGYRQRGVAPALHRGLPSPYLTLIFALDEPLIVVGHPDPHQAPGSYDTLL
GGLHTSPALISHDGAQSGVQVALRPLGARALLGLPAGELADQDLPADAVLGDVCAEMRERMRAASGWVELFAVLDDILCR
RAACRTSAVAPEIAEAWAMLERARGSVSVVDLAAEVGWSARHLRSRFRTEIGLTPKAASRVIRFDHARRLLARRAVAGDT
GELTLADLAAGCGFFDQAHLAREFRALAGVPPSRWLAEEAGYPPTGRRARAENTGTK

Sequences:

>Translated_297_residues
MTTPAETFAVVDEYVRVAPVPALRPYIAWYSGYRQRGVAPALHRGLPSPYLTLIFALDEPLIVVGHPDPHQAPGSYDTLL
GGLHTSPALISHDGAQSGVQVALRPLGARALLGLPAGELADQDLPADAVLGDVCAEMRERMRAASGWVELFAVLDDILCR
RAACRTSAVAPEIAEAWAMLERARGSVSVVDLAAEVGWSARHLRSRFRTEIGLTPKAASRVIRFDHARRLLARRAVAGDT
GELTLADLAAGCGFFDQAHLAREFRALAGVPPSRWLAEEAGYPPTGRRARAENTGTK
>Mature_296_residues
TTPAETFAVVDEYVRVAPVPALRPYIAWYSGYRQRGVAPALHRGLPSPYLTLIFALDEPLIVVGHPDPHQAPGSYDTLLG
GLHTSPALISHDGAQSGVQVALRPLGARALLGLPAGELADQDLPADAVLGDVCAEMRERMRAASGWVELFAVLDDILCRR
AACRTSAVAPEIAEAWAMLERARGSVSVVDLAAEVGWSARHLRSRFRTEIGLTPKAASRVIRFDHARRLLARRAVAGDTG
ELTLADLAAGCGFFDQAHLAREFRALAGVPPSRWLAEEAGYPPTGRRARAENTGTK

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31909; Mature: 31778

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPAETFAVVDEYVRVAPVPALRPYIAWYSGYRQRGVAPALHRGLPSPYLTLIFALDEP
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHEECCCC
LIVVGHPDPHQAPGSYDTLLGGLHTSPALISHDGAQSGVQVALRPLGARALLGLPAGELA
EEEEECCCCCCCCCCHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCHHHHCCCCHHHC
DQDLPADAVLGDVCAEMRERMRAASGWVELFAVLDDILCRRAACRTSAVAPEIAEAWAML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ERARGSVSVVDLAAEVGWSARHLRSRFRTEIGLTPKAASRVIRFDHARRLLARRAVAGDT
HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GELTLADLAAGCGFFDQAHLAREFRALAGVPPSRWLAEEAGYPPTGRRARAENTGTK
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTPAETFAVVDEYVRVAPVPALRPYIAWYSGYRQRGVAPALHRGLPSPYLTLIFALDEP
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHEECCCC
LIVVGHPDPHQAPGSYDTLLGGLHTSPALISHDGAQSGVQVALRPLGARALLGLPAGELA
EEEEECCCCCCCCCCHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCHHHHCCCCHHHC
DQDLPADAVLGDVCAEMRERMRAASGWVELFAVLDDILCRRAACRTSAVAPEIAEAWAML
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ERARGSVSVVDLAAEVGWSARHLRSRFRTEIGLTPKAASRVIRFDHARRLLARRAVAGDT
HHHCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GELTLADLAAGCGFFDQAHLAREFRALAGVPPSRWLAEEAGYPPTGRRARAENTGTK
CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA