| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318913
Identifier: 158318913
GI number: 158318913
Start: 8787956
End: 8789509
Strand: Direct
Name: 158318913
Synonym: Franean1_7196
Alternate gene names: NA
Gene position: 8787956-8789509 (Clockwise)
Preceding gene: 158318912
Following gene: 158318914
Centisome position: 97.84
GC content: 66.92
Gene sequence:
>1554_bases GTGGTCCAGGTCTGCTGCCTAGCCATTGTCATCGTGGCCGGGAACGGCCCGTTCCTCAGCGCCTGGGCGACCGACAAGTA CGACACCTGGCGCTCGCACCAGCCGGACTACATGCGTCAGTACGGCCGCTGGGACATCGTCGCCGACCCCGGTTCGCGCT CCATCCACGCGGCGCTGCTGCGGACCGGGAAGATTCTGCTGCTGGCCGGTTCGGGAAACAACCAGGCCAACTTCGACGCC AAGCGCTTCGAGACCCTGCTGTGGGACCCGACCGCCAACACCTTCGAGCAGGTCTACACGCCGTGGGACGTCTTCTGCGC CGGCCAGGCGTTTCTTCCGAGCGGTGAGCTGCTCATCGCCGGCGGCACGAAGAAGTACGAGGTCCTCGCCCAGGACTCGC CGGACGGCAAGAAGCAGGAGTACCAGGGGCTGAAGGACAGCTACACGTTCAATCCGCAGACGGAGCGGTACGAGAAGACC GGCGACCTGAACTTCGCCAGGTGGTACCCGACCCTGGTCACGCTGGCCAGCGGCCAGGTGGTCGCGGTCTCCGGCCTGAA CGAGAAGGGCGACATCGACCCAGGCAACACGGAGTGGTTCGACCAGGCGAACCGGACGTGGAACCACAACGAGGGGCTGG TCAAGGAGTTCCCGACCTACCCGTCGCTGCTGCTCGCCGGGGACGGCCGGCTGTTCTTCTCCGGCGCGAACGCCGGTTAC GGGCCGGCCTCGCTGGAAGCCCGCCAGCCCGGATTCTGGAGCCTCGCCGACGGTACGTTCCAGGCGGTTCCGGGCCTGCC TCAGCCGGAGATCAACGAGACCGCCGGAACGGTGATGCTGCCGCCGGCCCAGGAACAGCGGGTGATGTTCGTCGCCGGCG GCGGCGTCGGCGACACCCAGGTGGCCACCGCCCGCACCGCGATCGTCGACCTGGACGACCCGAATCCCCATTACGTCCCG GGGCCGAACACCACTGTCGCGAAGCGGTACCCCGGCGTCGTCGTCCTGCCGGACGACACCGTGCTCGTCTCCGGCGGCTC CACCGCCTACCGCCAGAAGGACACCCAGACGGCGGAGATCTACCACCCGGACACGAACACCTTCACCACAGCCGCCGACC CGCTCGTCGGCCGGGACTACCACTCGAGCTATCTACTGATGCCCGACGGCCGGGTGGCGGTTTTCGGTTCCAATCCGCTG AGCGACGACAACTTCTTCGAGACCCGGATCGAGATCTACAGTCCGCCCTACATGTACCAGGGTGAGCGGCCGGTCATTAA GACCGCGCCGACCTCGGTCACCCGTGGCACCACAATCGATCTGGGCGTCTCCCAGGAGGTTTCCAAGGTCCGCCTGATCC GTCCGGGCGCCTACACGCACGTGACCGACACCGAGCAGCGCTCGGTGGCCCTCCCCCTGGTCAGCCAGGCGAACGGCAAG GTAACGGTGAGTGTTCCCGACAACGCCAACCTGCTGCCGCCGGACTGGTACATGCTCTTCGTCGACAACGGCGAGAACAT TCCGTCCGTCGCCACCTGGGTGCAGGTCCAGTGA
Upstream 100 bases:
>100_bases GCGGGTGTCACTCGACGGCCTGTTGGAAGAGATCGGCTGATGGCCATGACGAGAATCTGATGGGACGATGAAAATAATCA GCGGGCCGCGTCGGTGGCGA
Downstream 100 bases:
>100_bases GCGCCCACCCCCACCATTCGGGCCAGCCGGACGGTCAGTACTAGCCTGGGACAGGTTGAATCGACGCAACGCAGGCGTCT GGCCCGGCCGGCTGGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Galactose Oxidase; Kelch Domain Protein; Kelch Domain-Containing Protein; NHL Repeat Containing Protein; Arabinogalactan Endo-1 4-Beta-Galactosidase; Kelch Repeat-Containing Protein; Kelch Domain Containing Protein; Exported Oxidase; Lectin Repeat-Containing Protein
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ
Sequences:
>Translated_517_residues MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ >Mature_517_residues MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALLRTGKILLLAGSGNNQANFDA KRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIAGGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKT GDLNFARWYPTLVTLASGQVVAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQVATARTAIVDLDDPNPHYVP GPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEIYHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPL SDDNFFETRIEIYSPPYMYQGERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56549; Mature: 56549
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALL CCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE RTGKILLLAGSGNNQANFDAKRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIA CCCEEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHCCCHHEEECCCEECCCCCEEEE GGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKTGDLNFARWYPTLVTLASGQV CCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCCE VAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCCCC GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQ CCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCE VATARTAIVDLDDPNPHYVPGPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEI EEEEEEEEEECCCCCCCCCCCCCCEEHHHCCCEEEECCCEEEEECCCCCEECCCCCEEEE YHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPLSDDNFFETRIEIYSPPYMYQ ECCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEC GERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK CCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCE VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEC >Mature Secondary Structure MVQVCCLAIVIVAGNGPFLSAWATDKYDTWRSHQPDYMRQYGRWDIVADPGSRSIHAALL CCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEEE RTGKILLLAGSGNNQANFDAKRFETLLWDPTANTFEQVYTPWDVFCAGQAFLPSGELLIA CCCEEEEEECCCCCCCCCCHHHEEEEEECCCCHHHHHHCCCHHEEECCCEECCCCCEEEE GGTKKYEVLAQDSPDGKKQEYQGLKDSYTFNPQTERYEKTGDLNFARWYPTLVTLASGQV CCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCHHHCCEEEEECCCCE VAVSGLNEKGDIDPGNTEWFDQANRTWNHNEGLVKEFPTYPSLLLAGDGRLFFSGANAGY EEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEECCCCCC GPASLEARQPGFWSLADGTFQAVPGLPQPEINETAGTVMLPPAQEQRVMFVAGGGVGDTQ CCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCE VATARTAIVDLDDPNPHYVPGPNTTVAKRYPGVVVLPDDTVLVSGGSTAYRQKDTQTAEI EEEEEEEEEECCCCCCCCCCCCCCEEHHHCCCEEEECCCEEEEECCCCCEECCCCCEEEE YHPDTNTFTTAADPLVGRDYHSSYLLMPDGRVAVFGSNPLSDDNFFETRIEIYSPPYMYQ ECCCCCCEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEC GERPVIKTAPTSVTRGTTIDLGVSQEVSKVRLIRPGAYTHVTDTEQRSVALPLVSQANGK CCCCEEEECCCCCCCCCEEEECCCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCE VTVSVPDNANLLPPDWYMLFVDNGENIPSVATWVQVQ EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA