| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is fdxA [H]
Identifier: 158318907
GI number: 158318907
Start: 8779987
End: 8780325
Strand: Reverse
Name: fdxA [H]
Synonym: Franean1_7190
Alternate gene names: 158318907
Gene position: 8780325-8779987 (Counterclockwise)
Preceding gene: 158318909
Following gene: 158318906
Centisome position: 97.75
GC content: 64.01
Gene sequence:
>339_bases ATGCCATTCGTGATCACCTCCGCGTGCATCGATGTCAAGGACGGCGCGTGCCTGGGTGGCGGATGCCCGGCCGACTGCAT CTACGAGGGAAACCGCAAGATGTACATAAACCCCGATGAATGCACCGAGTGCGGGGCGTGTGCGGTCGCCTGCCCGGTCG GGGCGGCGATGATCGACGAGATGGTCCCGGACGAGGAGCAGGATTTCATCAAGAGCGAGGAGCTGTTCTTCTCCGAGGTC CTGCCCGGCCGGGACGAGCCGCTCGGCGAGCCGGGCGGTGCCGCTGAGGTCGGCAAGATCAATGCTGACTCGGAATTCGT CGCCGCGTACAAGAAGTAG
Upstream 100 bases:
>100_bases ACTCCGGTCGGCGCGCGGCCGAGAAAATCGGGCTGTCGGGCGCGGGTGCACCGCGGTCGGCGGCCGCCGTCCTGTTCGGC TGATTGGAGAGGATATCATC
Downstream 100 bases:
>100_bases ATATCGCGGCGGGTGGAGGGGCACCTCGCCACGAGGCCACGCCGGCGGGTGATCGCTGCCGGCCTCCAGACAGATGCGCC TGGTCCGCTCCCTGGTCGAT
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEV LPGRDEPLGEPGGAAEVGKINADSEFVAAYKK
Sequences:
>Translated_112_residues MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEV LPGRDEPLGEPGGAAEVGKINADSEFVAAYKK >Mature_111_residues PFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDEMVPDEEQDFIKSEELFFSEVL PGRDEPLGEPGGAAEVGKINADSEFVAAYKK
Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR000813 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: NA
Molecular weight: Translated: 11833; Mature: 11702
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 7.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDE CCEEECCEEEECCCCCEECCCCCCCEEEECCCEEEECCHHCCCCCCEEECCCCCHHHHHH MVPDEEQDFIKSEELFFSEVLPGRDEPLGEPGGAAEVGKINADSEFVAAYKK HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECC >Mature Secondary Structure PFVITSACIDVKDGACLGGGCPADCIYEGNRKMYINPDECTECGACAVACPVGAAMIDE CEEECCEEEECCCCCEECCCCCCCEEEECCCEEEECCHHCCCCCCEEECCCCCHHHHHH MVPDEEQDFIKSEELFFSEVLPGRDEPLGEPGGAAEVGKINADSEFVAAYKK HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]