Click here to switch to the map view.

The map label for this gene is mcrA [H]

Identifier: 158318885

GI number: 158318885

Start: 8750432

End: 8750881

Strand: Reverse

Name: mcrA [H]

Synonym: Franean1_7168

Alternate gene names: 158318885

Gene position: 8750881-8750432 (Counterclockwise)

Preceding gene: 158318886

Following gene: 158318883

Centisome position: 97.43

GC content: 74.44

Gene sequence:

>450_bases
ATGGACCCGCCCGGCCCCGTCCCCGCGCACGGCGACGGGATGCTGCTCGGCGAGCTGCCCGAACAGGCCGTCGACGTGTT
CGTGGACGTCTCCCGCACGCACGGGCCGGCCCTGCTGTCGCTCGAGCTGCGCCACCTCGGCGGCGCGCTGCGCCCCGGCG
CGATGGCGGGCGGGGCCGTCGACGGGATCGACGCGGCGTTCGCGGTGTTCGCCGCCGGCATGACCCCGACCGAGGAGGCG
ACCCGCGCGGTGACGGCCGCGGTCGACGTCGTCCAGTGTTCGCTCGCACCATGGTCGACGGGCGGGTGCTACCTGAACTT
CGCCGAGCGTCCCAAGTCGGGGCAGGCGCTGTTCGGCGTGGACGTCCATCGTCGGCTGACCCGGATCAAGGCAGCCTACG
ACCCCGCCGACGTGATCCGGGCCAACCACCCGGTGCCACCCGCGAGCTGA

Upstream 100 bases:

>100_bases
GTGGGGCAGGCCGACGCGCTGCTCGCCCCGCTGCGCGCCCTCGAGCCCGAGCTGGACACGTTTCCAACCCACACCGGTCG
GTGAGCTCGGGCTGCTGCAC

Downstream 100 bases:

>100_bases
CGCCGCCGGCCCGCCGCTGGGACGCGGTCGGGAGGCCGTCGGCCGGTCTATGCCGCGGATCGGGGGCCGTGCGCGGTCCA
GCCCAGGCGGTTCAGCACCG

Product: berberine/berberine domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MDPPGPVPAHGDGMLLGELPEQAVDVFVDVSRTHGPALLSLELRHLGGALRPGAMAGGAVDGIDAAFAVFAAGMTPTEEA
TRAVTAAVDVVQCSLAPWSTGGCYLNFAERPKSGQALFGVDVHRRLTRIKAAYDPADVIRANHPVPPAS

Sequences:

>Translated_149_residues
MDPPGPVPAHGDGMLLGELPEQAVDVFVDVSRTHGPALLSLELRHLGGALRPGAMAGGAVDGIDAAFAVFAAGMTPTEEA
TRAVTAAVDVVQCSLAPWSTGGCYLNFAERPKSGQALFGVDVHRRLTRIKAAYDPADVIRANHPVPPAS
>Mature_149_residues
MDPPGPVPAHGDGMLLGELPEQAVDVFVDVSRTHGPALLSLELRHLGGALRPGAMAGGAVDGIDAAFAVFAAGMTPTEEA
TRAVTAAVDVVQCSLAPWSTGGCYLNFAERPKSGQALFGVDVHRRLTRIKAAYDPADVIRANHPVPPAS

Specific function: Involved in mitomycin resistance; oxidizes reduced form of mitomycins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012951
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016168
- InterPro:   IPR006094
- InterPro:   IPR006093 [H]

Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 15390; Mature: 15390

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPPGPVPAHGDGMLLGELPEQAVDVFVDVSRTHGPALLSLELRHLGGALRPGAMAGGAV
CCCCCCCCCCCCCEEECCCCHHHHHEEEECCCCCCCEEEEEEHHHCCCCCCCCCCCCCCC
DGIDAAFAVFAAGMTPTEEATRAVTAAVDVVQCSLAPWSTGGCYLNFAERPKSGQALFGV
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECH
DVHRRLTRIKAAYDPADVIRANHPVPPAS
HHHHHHHHHHHCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDPPGPVPAHGDGMLLGELPEQAVDVFVDVSRTHGPALLSLELRHLGGALRPGAMAGGAV
CCCCCCCCCCCCCEEECCCCHHHHHEEEECCCCCCCEEEEEEHHHCCCCCCCCCCCCCCC
DGIDAAFAVFAAGMTPTEEATRAVTAAVDVVQCSLAPWSTGGCYLNFAERPKSGQALFGV
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECH
DVHRRLTRIKAAYDPADVIRANHPVPPAS
HHHHHHHHHHHCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]