| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is zwf [H]
Identifier: 158318796
GI number: 158318796
Start: 8625120
End: 8626598
Strand: Reverse
Name: zwf [H]
Synonym: Franean1_7068
Alternate gene names: 158318796
Gene position: 8626598-8625120 (Counterclockwise)
Preceding gene: 158318797
Following gene: 158318795
Centisome position: 96.04
GC content: 59.57
Gene sequence:
>1479_bases ATGCCGCAGCTTATGTCGGTTGCCCCCTGCGAGATAGTAGTCTTCGGCGGCACAGGGGATCTGGCGATGCGCAAACTGAT GCCAGCGCTGTACCACCGCGACCGAGACGGGCAACTCACCCCCGACTCGCGGGTCATTGCCGTGTCCCGGGCCGGACTCG ATGATGCCGGATACCGCGACAAAGTTGATTCTGAACTGCGCCGGTTCGTCCCGGAGCTAATACACGAGCCGGATGTCCTA GCTCGCTTTATCCAACGCCTGCACCACATCACGGTCGACGTGGCGGAGCACAGCACCTGGGATGAACTGCGGACACTTCT GGCGGACGGAAAAGACCATGTGCGCGTCTTCTACCTTGCCTGTGCCCCACAACTGTTCGGGCCAACCTGTGTAGGCTTGC AAACCAACGGATTAGTGACCGATAACTCCAGGGTGGTCCTCGAGAAGCCACTTGGGCATGATCTGGTCTCCGCGCGCCGG ATTAACGATGAAGTCGGTGCGGTTTTTGCTGAGGAACAGATATTCCGTATCGACCACTACCTCGGTAAAGAAACCGTCCA GAACCTCCTTGTGCTACGCTTCGCCAACTCCCTTCTTGAGCCGCTGTGGAATTCTGGTGCGATCGACCATGTACAGATTA CGGTCGCAGAAACAATTGGCATCGGAGGGCGCGGCGACTATTACGATGGCTCGGGTGCCATACGTGACATGGTACAGAAT CACCTTCTGCAACTGCTCTGTCTGGTGGCGATGGAACCACCCAGCCGACTTGACCGCGAGGCGGTCCGCGACGAGAAGCT AAAGATTCTCCAGGCCCTATCCCCACTGACACTCGGTGACGTGGAACGGTGCGTCGTCCGAGGACAGTACACGGCCGGAC TCGTAGAGGGAGCTCCAGTTCCTTCTTACCAGGACGAAGTTGATGGGAGCACGAGTACCACCGAGACGTTTGTGGCGCTG AAGGTCGAGGTCCAGAACTGGCGCTGGTCCGGGGTACCCTTCTACCTGCGTACCGGCAAGAGGCTAGATCGTCATGCATC GGAGATCGTGGTTCAGTTCCGACCGGTACCACATTCAATCTTCCCGGGTATCAAGGATGCGATTTCTCCTAACGCTCTTG TGCTGCGGCTGCAACCTGACGAGGGCGTACGCCTCCACTTGATGGCCAAAGAACCGGGCCCGGGCGGCGTGCGACTGCGT CCAGTCCACCTCAACCTCAGCTTCGCCGAGACTTTCAAGTCACGCCTGCCCGATGCCTACGAGCGGCTACTCATGGACGT CGTTCGTGGCAACCCGACGTTGTTCATGCGACGCGACGAGGTCGAGGCCGCATGGGCGTGGGTGGAGCCCATCCTGGCCG CTCTGGCGGCGTCAATTGACTCACCGAGGCGCTACGCAGCTGGCACTGGTGGACCTGCTGCAGCGATCGCATTGATCGAA CGTGACGGCCGCACGTGGCATGAGGAGGTAGCAGAATGA
Upstream 100 bases:
>100_bases AGTTGGAGCGGCGTCCGGTAAACGAGGTACTGAATTGCGGAACCTCACTGACGAACAGTGCGACAACCCGCACGGCAGGT TCATTTCGATAGGAGAACCC
Downstream 100 bases:
>100_bases GTGTGAACACGGTCCTGCACCCGGTTGTCGCTGAGGTGACTGAACGGGTCGCCGCTCGCAGTGCGGCAACTCGCGAAGCC TATCTCTCCCGCGTCCAGGC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MPQLMSVAPCEIVVFGGTGDLAMRKLMPALYHRDRDGQLTPDSRVIAVSRAGLDDAGYRDKVDSELRRFVPELIHEPDVL ARFIQRLHHITVDVAEHSTWDELRTLLADGKDHVRVFYLACAPQLFGPTCVGLQTNGLVTDNSRVVLEKPLGHDLVSARR INDEVGAVFAEEQIFRIDHYLGKETVQNLLVLRFANSLLEPLWNSGAIDHVQITVAETIGIGGRGDYYDGSGAIRDMVQN HLLQLLCLVAMEPPSRLDREAVRDEKLKILQALSPLTLGDVERCVVRGQYTAGLVEGAPVPSYQDEVDGSTSTTETFVAL KVEVQNWRWSGVPFYLRTGKRLDRHASEIVVQFRPVPHSIFPGIKDAISPNALVLRLQPDEGVRLHLMAKEPGPGGVRLR PVHLNLSFAETFKSRLPDAYERLLMDVVRGNPTLFMRRDEVEAAWAWVEPILAALAASIDSPRRYAAGTGGPAAAIALIE RDGRTWHEEVAE
Sequences:
>Translated_492_residues MPQLMSVAPCEIVVFGGTGDLAMRKLMPALYHRDRDGQLTPDSRVIAVSRAGLDDAGYRDKVDSELRRFVPELIHEPDVL ARFIQRLHHITVDVAEHSTWDELRTLLADGKDHVRVFYLACAPQLFGPTCVGLQTNGLVTDNSRVVLEKPLGHDLVSARR INDEVGAVFAEEQIFRIDHYLGKETVQNLLVLRFANSLLEPLWNSGAIDHVQITVAETIGIGGRGDYYDGSGAIRDMVQN HLLQLLCLVAMEPPSRLDREAVRDEKLKILQALSPLTLGDVERCVVRGQYTAGLVEGAPVPSYQDEVDGSTSTTETFVAL KVEVQNWRWSGVPFYLRTGKRLDRHASEIVVQFRPVPHSIFPGIKDAISPNALVLRLQPDEGVRLHLMAKEPGPGGVRLR PVHLNLSFAETFKSRLPDAYERLLMDVVRGNPTLFMRRDEVEAAWAWVEPILAALAASIDSPRRYAAGTGGPAAAIALIE RDGRTWHEEVAE >Mature_491_residues PQLMSVAPCEIVVFGGTGDLAMRKLMPALYHRDRDGQLTPDSRVIAVSRAGLDDAGYRDKVDSELRRFVPELIHEPDVLA RFIQRLHHITVDVAEHSTWDELRTLLADGKDHVRVFYLACAPQLFGPTCVGLQTNGLVTDNSRVVLEKPLGHDLVSARRI NDEVGAVFAEEQIFRIDHYLGKETVQNLLVLRFANSLLEPLWNSGAIDHVQITVAETIGIGGRGDYYDGSGAIRDMVQNH LLQLLCLVAMEPPSRLDREAVRDEKLKILQALSPLTLGDVERCVVRGQYTAGLVEGAPVPSYQDEVDGSTSTTETFVALK VEVQNWRWSGVPFYLRTGKRLDRHASEIVVQFRPVPHSIFPGIKDAISPNALVLRLQPDEGVRLHLMAKEPGPGGVRLRP VHLNLSFAETFKSRLPDAYERLLMDVVRGNPTLFMRRDEVEAAWAWVEPILAALAASIDSPRRYAAGTGGPAAAIALIER DGRTWHEEVAE
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=480, Percent_Identity=37.0833333333333, Blast_Score=300, Evalue=3e-81, Organism=Homo sapiens, GI109389365, Length=480, Percent_Identity=37.0833333333333, Blast_Score=300, Evalue=3e-81, Organism=Homo sapiens, GI52145310, Length=506, Percent_Identity=30.8300395256917, Blast_Score=172, Evalue=7e-43, Organism=Escherichia coli, GI1788158, Length=493, Percent_Identity=48.2758620689655, Blast_Score=468, Evalue=1e-133, Organism=Caenorhabditis elegans, GI17538218, Length=488, Percent_Identity=37.7049180327869, Blast_Score=318, Evalue=3e-87, Organism=Saccharomyces cerevisiae, GI6324088, Length=485, Percent_Identity=36.0824742268041, Blast_Score=298, Evalue=1e-81, Organism=Drosophila melanogaster, GI24643352, Length=478, Percent_Identity=35.9832635983264, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI24643350, Length=478, Percent_Identity=35.9832635983264, Blast_Score=285, Evalue=4e-77, Organism=Drosophila melanogaster, GI221513548, Length=497, Percent_Identity=29.9798792756539, Blast_Score=201, Evalue=7e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 54635; Mature: 54504
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQLMSVAPCEIVVFGGTGDLAMRKLMPALYHRDRDGQLTPDSRVIAVSRAGLDDAGYRD CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCH KVDSELRRFVPELIHEPDVLARFIQRLHHITVDVAEHSTWDELRTLLADGKDHVRVFYLA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEHHCCCCHHHHHHHHHCCCCCEEEEEEE CAPQLFGPTCVGLQTNGLVTDNSRVVLEKPLGHDLVSARRINDEVGAVFAEEQIFRIDHY ECHHHCCCEEECEECCCEEECCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH LGKETVQNLLVLRFANSLLEPLWNSGAIDHVQITVAETIGIGGRGDYYDGSGAIRDMVQN HCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHEECCCCCCCCCCCCHHHHHHHHH HLLQLLCLVAMEPPSRLDREAVRDEKLKILQALSPLTLGDVERCVVRGQYTAGLVEGAPV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCCCC PSYQDEVDGSTSTTETFVALKVEVQNWRWSGVPFYLRTGKRLDRHASEIVVQFRPVPHSI CCCHHHCCCCCCCCEEEEEEEEEEECEEECCCCEEEECCCHHHHHHHHEEEEEECCCHHH FPGIKDAISPNALVLRLQPDEGVRLHLMAKEPGPGGVRLRPVHLNLSFAETFKSRLPDAY CCCCHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEECHHHHHHHHHCCHHH ERLLMDVVRGNPTLFMRRDEVEAAWAWVEPILAALAASIDSPRRYAAGTGGPAAAIALIE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHEEEEEE RDGRTWHEEVAE CCCCHHHHHHCC >Mature Secondary Structure PQLMSVAPCEIVVFGGTGDLAMRKLMPALYHRDRDGQLTPDSRVIAVSRAGLDDAGYRD CCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCH KVDSELRRFVPELIHEPDVLARFIQRLHHITVDVAEHSTWDELRTLLADGKDHVRVFYLA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEHHCCCCHHHHHHHHHCCCCCEEEEEEE CAPQLFGPTCVGLQTNGLVTDNSRVVLEKPLGHDLVSARRINDEVGAVFAEEQIFRIDHY ECHHHCCCEEECEECCCEEECCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH LGKETVQNLLVLRFANSLLEPLWNSGAIDHVQITVAETIGIGGRGDYYDGSGAIRDMVQN HCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHEECCCCCCCCCCCCHHHHHHHHH HLLQLLCLVAMEPPSRLDREAVRDEKLKILQALSPLTLGDVERCVVRGQYTAGLVEGAPV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHCCCCCCCC PSYQDEVDGSTSTTETFVALKVEVQNWRWSGVPFYLRTGKRLDRHASEIVVQFRPVPHSI CCCHHHCCCCCCCCEEEEEEEEEEECEEECCCCEEEECCCHHHHHHHHEEEEEECCCHHH FPGIKDAISPNALVLRLQPDEGVRLHLMAKEPGPGGVRLRPVHLNLSFAETFKSRLPDAY CCCCHHHCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEEEEECHHHHHHHHHCCHHH ERLLMDVVRGNPTLFMRRDEVEAAWAWVEPILAALAASIDSPRRYAAGTGGPAAAIALIE HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHEEEEEE RDGRTWHEEVAE CCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA