| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318728
Identifier: 158318728
GI number: 158318728
Start: 8527514
End: 8530261
Strand: Direct
Name: 158318728
Synonym: Franean1_6999
Alternate gene names: NA
Gene position: 8527514-8530261 (Clockwise)
Preceding gene: 158318727
Following gene: 158318729
Centisome position: 94.94
GC content: 75.25
Gene sequence:
>2748_bases ATGGCGTTCGACGTCGAGGCGTACCGGAGGGGCGTCGTTGATCCCGCCCGGAAGCAGGGAGTGCCGAACGACCTGTTCAC GCGCTACGCGCTGGACGAGGCCACCGCGGGTGACAAGGAGCTGTTCGAGGCGCGGGTCGAGGAGGTCACGAAGTACTGGC GGACTCTGAAGCTCAAGAAGACCCACGCCGCCGTCGCGGATGCCCTGCTCGCGGCGCACGCGGAGCTGAGGGGCTCCGGC CAGCTCACGCCGGCGGCCTTCCGGGAACGCCGCGAGCGGGCGCGCAAGGAGGAACAGGAGTACCTGGACCGCCTCGTCAC CGCGCTGGCCGCGGCGAACCCGTGTATCAGCGAGGCGATGGTGGGCCGCCTGATCTCGGGGACCGCGGGGGCCGCCGGTG CGGGCAGCGGCGGGGGTGCACTCGACGCGGCGACCGTCCGGGCCGCGCTGAAGCGGCACAACCTGCGGGTCATGGACCGG GAGTGGAAGCTCCCGGTCGGCCCGCCGCCGAGTCAGGCGCGCTCGCTGCGCGAACCGCTGGCCGTTCTCGGCCTGCGCCT GTCCGCCGACGTCGTCTTCGGCGCCGAGCGGGTCCGGGCCGGCTTCCGGCTGCGGGACGGCTTCCGGCTGGTGTCCGAGC CGGCCGTCGTCAACGAGCAGGAGGTGACCCGGGCCCGCCAGGCCCGCGCCCGCGCGGCCCAGGACGAGCGTCAGACCGCG GCCGAGAACACCTTCGTGATCATTCTCGGCTCCGTGCGCTCCCCGGCCGGGTACGACGCCCTGATCGGCTGGGAGATCGT CGAGGCGCTGCGCGGCGGGGTCGAGGCAGGCCTGCCCGCTCGCGCGATCGCCGACCAGGCGGCCTCCCTGGGCCTGGTCC TGGAGGAGGCCGAGGAGCTGGCGGTCACGCTCGCCGAGGCCTGGCGGGGTGGCGCAGCCGGGTCCGGGAACGCCGTCCAG GAGATCCACGACGCGCTCGCGGCCGGCCGGCTGCGCGCCGCTCGCCAGCTTGCCGCCGCGTTGCCGGACGCCGAGCGGGC CGAGATGTCCGGGCAGGTCGAGGCGGCCGAAGCCAGGGTTCGGACGTTGCTGACCGGCGCGGACGAGGCATGGTCGCGCC ACCGGCCGGAGGAGACCGCCGCGCTGCTGGCCGGGGCTGCCGAGATCGCGGCCGATCATGACGACATCCAGGCCCGGCTC CGCGCGATCCCGCCGCCGCCGCCACCGTCGGTCGAGGCGGGGGCCGACGGGACCAGGGTGAGCGTCCGGTGGACACCCAG CCCCGCCCGCACCGGCGAAGTCGCCTACCGGCTGGTGCGCGCGACCGGCCGAGCCGCCACCACGCCTGATGCCGGGGAGC CAGTCGCCGAGACACCGGCCAACACCGCGGTCGACGAGGCCGCTCCACTGGGCGAACGGGTCTTCTACACGGTCTTCGCC ACCCGCGCCGAGGGCATCTGGTCGTCGGGCGCGGATGCCGCCGCCGTTCTCCTCACCCCGGAGGTCCAGGACCTCGTGCT GGCGACCGACGCGGAGTCGGTGACCGGCACGTGGCGGGCGCATCCGGGGATCCACGAGGTCAACGTGCGCCGGACCGAAC GTGGCATGACCGGTCGCGGGACAAGGCCGACCTCCGTCACGGCCACCGGCTTCACCGACACACGCCTGCGGTCGGGCACG GCCTACCAGTACCGGATCGAGGCGGTGTACCTCGGAGCGGACGGGGCTCGGCGCGTCTCGGCCGGGCTGGTCGTCACGGC CCGGCCGGAGCGGCCGCCTGAGGCGGTGAGCGACCTCGCCGTCGAGCTTCCCACCGAGACGGCATCGTCCCCGTCCGGGG CGTCGACCCGGTCGGACGGGTTGTCGGCGCTCGTTGTCTGGACGCCGCCGACAAGCGGGACGGTGCAGGTGCGGATGGCC TCCACGGCACCAAGGTGGGCCGCGGGGACCGCTGTGTCAGCCGCGGATGTCTCCCGGCACGGCGTCGCGCTGCCCGGCGC ACCCGTGACCCGGGCCGACGGACGGGTCGCGCTGCCCGTCCGCCCGCGGCACGGCCGCGCCTTCCTCACCGCGGTCACCT GCGCCGCCGGCGGCTCCGTCGCGGTCGTCGGCGCCACGGTGCCGATCTCGCTGGCGGACGCGGTCCGCGGGCTCACAGCG GCTCGGTTCGGCGATGCCGTCCGGCTGCGCTGGGACTGGCCGGAGGGCGCGAGCCTGGCACGGGTCCAGTGGTACCCGGC CGGCTCCGCAGGTGACGGGCCGACCGGTGAGGTGGAGATCCGACCGCGGCGCTACATCGACAGCGGCGGGCTGGAGATCC AGGTCGGCTCGGATCCGGTCACCGTGGCGGTCCGGACGGTGACCGGCGAGGAGGAGGACCGTGCGGTCTCCCCGCCGGTC ACCGTGCTCGTCCCCGGGCGCGGTGTCGAGGTGACCTACGAGCTCCGGCCGGCGCGGCTGCCCTGGCCGCGGCGGGCCGT CCTCGAGGTGGTGTGTGACCGCACCTGCCGGCTGCCACCGCTGGTCGTCGTCGGCAGGTCGGACGGGATCCTGCCGCTGA GCGCCACCCATGGCACCGCGCTCGCCCGTCTCCCGGCGCGCGACGTCACCGCTCGGAAGCGGGCGCTGATCACAGTTCCG GCGCCACGGCGCGGTGCCTGGGGGCTCGCCTGCTTCGTCGACCCCACCGCGCCACCCGAGGACGCGAATGCCCAGGTGAC GTTGGTCCGCGCCCGACGGAGGAGGTGA
Upstream 100 bases:
>100_bases CACGCTCAGCGAATAGCCGTCCGTCCGAGGGTGCGGCGGGCACCTACGCCGCACCGGCGGGACCGGCGAATGGACTGCAT GTGCATCGGGGGTCTGAGGA
Downstream 100 bases:
>100_bases CCCGATGAGCAGAAAGCTGGTCTGTCCGTACTGCTACCAGCAGTTCGGGGAACGGGAGATCTGGTTCCGGTGCTCCGGGC GGCCAGGCCCCACCGGAAAG
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Fibronectin Type III Domain Protein
Number of amino acids: Translated: 915; Mature: 914
Protein sequence:
>915_residues MAFDVEAYRRGVVDPARKQGVPNDLFTRYALDEATAGDKELFEARVEEVTKYWRTLKLKKTHAAVADALLAAHAELRGSG QLTPAAFRERRERARKEEQEYLDRLVTALAAANPCISEAMVGRLISGTAGAAGAGSGGGALDAATVRAALKRHNLRVMDR EWKLPVGPPPSQARSLREPLAVLGLRLSADVVFGAERVRAGFRLRDGFRLVSEPAVVNEQEVTRARQARARAAQDERQTA AENTFVIILGSVRSPAGYDALIGWEIVEALRGGVEAGLPARAIADQAASLGLVLEEAEELAVTLAEAWRGGAAGSGNAVQ EIHDALAAGRLRAARQLAAALPDAERAEMSGQVEAAEARVRTLLTGADEAWSRHRPEETAALLAGAAEIAADHDDIQARL RAIPPPPPPSVEAGADGTRVSVRWTPSPARTGEVAYRLVRATGRAATTPDAGEPVAETPANTAVDEAAPLGERVFYTVFA TRAEGIWSSGADAAAVLLTPEVQDLVLATDAESVTGTWRAHPGIHEVNVRRTERGMTGRGTRPTSVTATGFTDTRLRSGT AYQYRIEAVYLGADGARRVSAGLVVTARPERPPEAVSDLAVELPTETASSPSGASTRSDGLSALVVWTPPTSGTVQVRMA STAPRWAAGTAVSAADVSRHGVALPGAPVTRADGRVALPVRPRHGRAFLTAVTCAAGGSVAVVGATVPISLADAVRGLTA ARFGDAVRLRWDWPEGASLARVQWYPAGSAGDGPTGEVEIRPRRYIDSGGLEIQVGSDPVTVAVRTVTGEEEDRAVSPPV TVLVPGRGVEVTYELRPARLPWPRRAVLEVVCDRTCRLPPLVVVGRSDGILPLSATHGTALARLPARDVTARKRALITVP APRRGAWGLACFVDPTAPPEDANAQVTLVRARRRR
Sequences:
>Translated_915_residues MAFDVEAYRRGVVDPARKQGVPNDLFTRYALDEATAGDKELFEARVEEVTKYWRTLKLKKTHAAVADALLAAHAELRGSG QLTPAAFRERRERARKEEQEYLDRLVTALAAANPCISEAMVGRLISGTAGAAGAGSGGGALDAATVRAALKRHNLRVMDR EWKLPVGPPPSQARSLREPLAVLGLRLSADVVFGAERVRAGFRLRDGFRLVSEPAVVNEQEVTRARQARARAAQDERQTA AENTFVIILGSVRSPAGYDALIGWEIVEALRGGVEAGLPARAIADQAASLGLVLEEAEELAVTLAEAWRGGAAGSGNAVQ EIHDALAAGRLRAARQLAAALPDAERAEMSGQVEAAEARVRTLLTGADEAWSRHRPEETAALLAGAAEIAADHDDIQARL RAIPPPPPPSVEAGADGTRVSVRWTPSPARTGEVAYRLVRATGRAATTPDAGEPVAETPANTAVDEAAPLGERVFYTVFA TRAEGIWSSGADAAAVLLTPEVQDLVLATDAESVTGTWRAHPGIHEVNVRRTERGMTGRGTRPTSVTATGFTDTRLRSGT AYQYRIEAVYLGADGARRVSAGLVVTARPERPPEAVSDLAVELPTETASSPSGASTRSDGLSALVVWTPPTSGTVQVRMA STAPRWAAGTAVSAADVSRHGVALPGAPVTRADGRVALPVRPRHGRAFLTAVTCAAGGSVAVVGATVPISLADAVRGLTA ARFGDAVRLRWDWPEGASLARVQWYPAGSAGDGPTGEVEIRPRRYIDSGGLEIQVGSDPVTVAVRTVTGEEEDRAVSPPV TVLVPGRGVEVTYELRPARLPWPRRAVLEVVCDRTCRLPPLVVVGRSDGILPLSATHGTALARLPARDVTARKRALITVP APRRGAWGLACFVDPTAPPEDANAQVTLVRARRRR >Mature_914_residues AFDVEAYRRGVVDPARKQGVPNDLFTRYALDEATAGDKELFEARVEEVTKYWRTLKLKKTHAAVADALLAAHAELRGSGQ LTPAAFRERRERARKEEQEYLDRLVTALAAANPCISEAMVGRLISGTAGAAGAGSGGGALDAATVRAALKRHNLRVMDRE WKLPVGPPPSQARSLREPLAVLGLRLSADVVFGAERVRAGFRLRDGFRLVSEPAVVNEQEVTRARQARARAAQDERQTAA ENTFVIILGSVRSPAGYDALIGWEIVEALRGGVEAGLPARAIADQAASLGLVLEEAEELAVTLAEAWRGGAAGSGNAVQE IHDALAAGRLRAARQLAAALPDAERAEMSGQVEAAEARVRTLLTGADEAWSRHRPEETAALLAGAAEIAADHDDIQARLR AIPPPPPPSVEAGADGTRVSVRWTPSPARTGEVAYRLVRATGRAATTPDAGEPVAETPANTAVDEAAPLGERVFYTVFAT RAEGIWSSGADAAAVLLTPEVQDLVLATDAESVTGTWRAHPGIHEVNVRRTERGMTGRGTRPTSVTATGFTDTRLRSGTA YQYRIEAVYLGADGARRVSAGLVVTARPERPPEAVSDLAVELPTETASSPSGASTRSDGLSALVVWTPPTSGTVQVRMAS TAPRWAAGTAVSAADVSRHGVALPGAPVTRADGRVALPVRPRHGRAFLTAVTCAAGGSVAVVGATVPISLADAVRGLTAA RFGDAVRLRWDWPEGASLARVQWYPAGSAGDGPTGEVEIRPRRYIDSGGLEIQVGSDPVTVAVRTVTGEEEDRAVSPPVT VLVPGRGVEVTYELRPARLPWPRRAVLEVVCDRTCRLPPLVVVGRSDGILPLSATHGTALARLPARDVTARKRALITVPA PRRGAWGLACFVDPTAPPEDANAQVTLVRARRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96678; Mature: 96547
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: PS50853 FN3 L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFDVEAYRRGVVDPARKQGVPNDLFTRYALDEATAGDKELFEARVEEVTKYWRTLKLKK CCCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH THAAVADALLAAHAELRGSGQLTPAAFRERRERARKEEQEYLDRLVTALAAANPCISEAM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VGRLISGTAGAAGAGSGGGALDAATVRAALKRHNLRVMDREWKLPVGPPPSQARSLREPL HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHH AVLGLRLSADVVFGAERVRAGFRLRDGFRLVSEPAVVNEQEVTRARQARARAAQDERQTA HHHCEEEECCEEECHHHHHCCCEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH AENTFVIILGSVRSPAGYDALIGWEIVEALRGGVEAGLPARAIADQAASLGLVLEEAEEL CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH AVTLAEAWRGGAAGSGNAVQEIHDALAAGRLRAARQLAAALPDAERAEMSGQVEAAEARV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH RTLLTGADEAWSRHRPEETAALLAGAAEIAADHDDIQARLRAIPPPPPPSVEAGADGTRV HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEE SVRWTPSPARTGEVAYRLVRATGRAATTPDAGEPVAETPANTAVDEAAPLGERVFYTVFA EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEE TRAEGIWSSGADAAAVLLTPEVQDLVLATDAESVTGTWRAHPGIHEVNVRRTERGMTGRG HHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEECCHHHCCCCCCC TRPTSVTATGFTDTRLRSGTAYQYRIEAVYLGADGARRVSAGLVVTARPERPPEAVSDLA CCCCEEEECCCCHHHHCCCCEEEEEEEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHE VELPTETASSPSGASTRSDGLSALVVWTPPTSGTVQVRMASTAPRWAAGTAVSAADVSRH EECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEHHHHHHC GVALPGAPVTRADGRVALPVRPRHGRAFLTAVTCAAGGSVAVVGATVPISLADAVRGLTA CEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCEEHHHHHHHHHH ARFGDAVRLRWDWPEGASLARVQWYPAGSAGDGPTGEVEIRPRRYIDSGGLEIQVGSDPV HHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEECCHHEECCCCEEEEECCCCE TVAVRTVTGEEEDRAVSPPVTVLVPGRGVEVTYELRPARLPWPRRAVLEVVCDRTCRLPP EEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC LVVVGRSDGILPLSATHGTALARLPARDVTARKRALITVPAPRRGAWGLACFVDPTAPPE EEEECCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCC DANAQVTLVRARRRR CCCCEEEEEECCCCC >Mature Secondary Structure AFDVEAYRRGVVDPARKQGVPNDLFTRYALDEATAGDKELFEARVEEVTKYWRTLKLKK CCCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH THAAVADALLAAHAELRGSGQLTPAAFRERRERARKEEQEYLDRLVTALAAANPCISEAM HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VGRLISGTAGAAGAGSGGGALDAATVRAALKRHNLRVMDREWKLPVGPPPSQARSLREPL HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHH AVLGLRLSADVVFGAERVRAGFRLRDGFRLVSEPAVVNEQEVTRARQARARAAQDERQTA HHHCEEEECCEEECHHHHHCCCEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH AENTFVIILGSVRSPAGYDALIGWEIVEALRGGVEAGLPARAIADQAASLGLVLEEAEEL CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHH AVTLAEAWRGGAAGSGNAVQEIHDALAAGRLRAARQLAAALPDAERAEMSGQVEAAEARV HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH RTLLTGADEAWSRHRPEETAALLAGAAEIAADHDDIQARLRAIPPPPPPSVEAGADGTRV HHHHCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEE SVRWTPSPARTGEVAYRLVRATGRAATTPDAGEPVAETPANTAVDEAAPLGERVFYTVFA EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEE TRAEGIWSSGADAAAVLLTPEVQDLVLATDAESVTGTWRAHPGIHEVNVRRTERGMTGRG HHHCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCCEEEECCHHHCCCCCCC TRPTSVTATGFTDTRLRSGTAYQYRIEAVYLGADGARRVSAGLVVTARPERPPEAVSDLA CCCCEEEECCCCHHHHCCCCEEEEEEEEEEECCCCCCEEECCEEEEECCCCCHHHHHHHE VELPTETASSPSGASTRSDGLSALVVWTPPTSGTVQVRMASTAPRWAAGTAVSAADVSRH EECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCEEEHHHHHHC GVALPGAPVTRADGRVALPVRPRHGRAFLTAVTCAAGGSVAVVGATVPISLADAVRGLTA CEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEEEEECCEEHHHHHHHHHH ARFGDAVRLRWDWPEGASLARVQWYPAGSAGDGPTGEVEIRPRRYIDSGGLEIQVGSDPV HHCCCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCEEEECCHHEECCCCEEEEECCCCE TVAVRTVTGEEEDRAVSPPVTVLVPGRGVEVTYELRPARLPWPRRAVLEVVCDRTCRLPP EEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCC LVVVGRSDGILPLSATHGTALARLPARDVTARKRALITVPAPRRGAWGLACFVDPTAPPE EEEECCCCCEEEEECCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCC DANAQVTLVRARRRR CCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA