| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cutS [H]
Identifier: 158318679
GI number: 158318679
Start: 8464441
End: 8465643
Strand: Direct
Name: cutS [H]
Synonym: Franean1_6947
Alternate gene names: 158318679
Gene position: 8464441-8465643 (Clockwise)
Preceding gene: 158318678
Following gene: 158318680
Centisome position: 94.24
GC content: 72.24
Gene sequence:
>1203_bases ATGTCGGTCAGGATCCGGCTCGCGCTGATGTGCGGTGGCCTGTTTCTCCTCAGTGGCGTGGTGCTGCTGGCCGTCAACTA CATTCTGGTTCGCTCCGCGCTGCCGCCGGCCGCCGCTCCCGTCGCACATGCCTTCGAGGGAACGATCGCGATGCCCGGGC AGTCGGGTCCCGGACTGCCCGGCACCGTCGGGACCGGTTCGGGCCCGGAGACCGGTGTGCTGACCGTGGTCAGCGCCGTC CGCAACTATCGCGGGGGTGTGCTGAACACCCTGCTGGTGCAGTCAGGGGTGGCGATCGGGGCCACGCTGATCCTGGCGTT GCTGCTGGGGTGGGTGGTGGCCGACCGGACGTTGCGTCCGGTGCAGGCGGTGGTCGCGACGGCCCGCCGGCTCGGGGCGG ACAATCTTGATGCGCGGATCCGGTTGCGCGGGCCACGCGACGAGCTGACCGAGCTCGCCGACACGTTCGACGAGATGCTC GACCGGCTGGCCGCGTCCTTCGACAGCCAGCGCCGGTTCGTGGCCAACGCGTCGCACGAGCTGCGCACCCCGCTGGCCGC TCAGCGCACCCTCGTCGAGGTCGCGATGGGCCGGCCCGGGGCCGAACCGGCGTTGCGCGAGCTCGGTACCCGCCTGTTGA CGATGAACGTGCGCATCGAGGCACTCATCGAAGGGCTGCTGGTGCTGGCGCGCAGCGACCGTGGCCTCGCGGCCCGCCAG GTGGTGTGCCTTGACGAGGTCGTCGAGACGGTCGTCGACACGCACCGGGCGGTCGCCGCCGAGGCCGGGGTGGACCTGCG GTGGGAGCGTACGGGCCGCGACCGTCCCGCTCGGCCGCCCGATCTCGTGTGGGGCGACCGGGTGCTGCTGGAGCGGATGG TCTCCAACCTGGTCGACAACGCGATCAAGTACAACCGACGCGGCGGGACGGTGTGGGTGCGCGACGGCAGGGATCCGGTG CTGTGGGTCGCCAACACCGGTCCCCCGGTGCCTTCGTCCTCGGCCGCCGACCTTTTCGAACCGTTCAGCCAGGCCGGCCG GGGATCGCGGGGGGCCGAGCCCGGCGCCCAGCCCGGTGCCGGGCTCGGCCTGTCGATTGTCGCCTCGATCGTCCGCGCCC ACGGCGGCTCGGTCCGGGCCGTGTCCCGGCCCGAAGGCGGCCTGGAGATGGCCGTCTTCCTCCCGACCCGGGAAAGTGCG TGA
Upstream 100 bases:
>100_bases TGATGACGTTGCGCCGCAAGCTGGGGCCGCCCCCGCTGATCGAGACGGTCGCCGGGGTCGGGTACCGCATGAAGGGCTGA GGAGACCCCGGCCGGTCGCG
Downstream 100 bases:
>100_bases TCCGGACCGCGGGCCCATGGTCCCGGCGAGACCTGGCCGACAAACCGAAAACCGCCTGCCGGACGGCCGATGTCCGTCTC CGCCCGCGATGCGAGATTCG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSVRIRLALMCGGLFLLSGVVLLAVNYILVRSALPPAAAPVAHAFEGTIAMPGQSGPGLPGTVGTGSGPETGVLTVVSAV RNYRGGVLNTLLVQSGVAIGATLILALLLGWVVADRTLRPVQAVVATARRLGADNLDARIRLRGPRDELTELADTFDEML DRLAASFDSQRRFVANASHELRTPLAAQRTLVEVAMGRPGAEPALRELGTRLLTMNVRIEALIEGLLVLARSDRGLAARQ VVCLDEVVETVVDTHRAVAAEAGVDLRWERTGRDRPARPPDLVWGDRVLLERMVSNLVDNAIKYNRRGGTVWVRDGRDPV LWVANTGPPVPSSSAADLFEPFSQAGRGSRGAEPGAQPGAGLGLSIVASIVRAHGGSVRAVSRPEGGLEMAVFLPTRESA
Sequences:
>Translated_400_residues MSVRIRLALMCGGLFLLSGVVLLAVNYILVRSALPPAAAPVAHAFEGTIAMPGQSGPGLPGTVGTGSGPETGVLTVVSAV RNYRGGVLNTLLVQSGVAIGATLILALLLGWVVADRTLRPVQAVVATARRLGADNLDARIRLRGPRDELTELADTFDEML DRLAASFDSQRRFVANASHELRTPLAAQRTLVEVAMGRPGAEPALRELGTRLLTMNVRIEALIEGLLVLARSDRGLAARQ VVCLDEVVETVVDTHRAVAAEAGVDLRWERTGRDRPARPPDLVWGDRVLLERMVSNLVDNAIKYNRRGGTVWVRDGRDPV LWVANTGPPVPSSSAADLFEPFSQAGRGSRGAEPGAQPGAGLGLSIVASIVRAHGGSVRAVSRPEGGLEMAVFLPTRESA >Mature_399_residues SVRIRLALMCGGLFLLSGVVLLAVNYILVRSALPPAAAPVAHAFEGTIAMPGQSGPGLPGTVGTGSGPETGVLTVVSAVR NYRGGVLNTLLVQSGVAIGATLILALLLGWVVADRTLRPVQAVVATARRLGADNLDARIRLRGPRDELTELADTFDEMLD RLAASFDSQRRFVANASHELRTPLAAQRTLVEVAMGRPGAEPALRELGTRLLTMNVRIEALIEGLLVLARSDRGLAARQV VCLDEVVETVVDTHRAVAAEAGVDLRWERTGRDRPARPPDLVWGDRVLLERMVSNLVDNAIKYNRRGGTVWVRDGRDPVL WVANTGPPVPSSSAADLFEPFSQAGRGSRGAEPGAQPGAGLGLSIVASIVRAHGGSVRAVSRPEGGLEMAVFLPTRESA
Specific function: Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=322, Percent_Identity=28.8819875776398, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788393, Length=291, Percent_Identity=32.3024054982818, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790346, Length=279, Percent_Identity=27.5985663082437, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI87082128, Length=317, Percent_Identity=27.7602523659306, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787894, Length=280, Percent_Identity=30.3571428571429, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1790551, Length=290, Percent_Identity=26.8965517241379, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788279, Length=298, Percent_Identity=25.1677852348993, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1786912, Length=263, Percent_Identity=29.6577946768061, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=30.1204819277108, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789403, Length=296, Percent_Identity=29.0540540540541, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789149, Length=346, Percent_Identity=24.2774566473988, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1787374, Length=312, Percent_Identity=25, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 42296; Mature: 42165
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRIRLALMCGGLFLLSGVVLLAVNYILVRSALPPAAAPVAHAFEGTIAMPGQSGPGLP CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEECCCCCCCCCC GTVGTGSGPETGVLTVVSAVRNYRGGVLNTLLVQSGVAIGATLILALLLGWVVADRTLRP CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH VQAVVATARRLGADNLDARIRLRGPRDELTELADTFDEMLDRLAASFDSQRRFVANASHE HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LRTPLAAQRTLVEVAMGRPGAEPALRELGTRLLTMNVRIEALIEGLLVLARSDRGLAARQ HHCCHHHHHHHHHHHHCCCCCCHHHHHHCHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHH VVCLDEVVETVVDTHRAVAAEAGVDLRWERTGRDRPARPPDLVWGDRVLLERMVSNLVDN HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AIKYNRRGGTVWVRDGRDPVLWVANTGPPVPSSSAADLFEPFSQAGRGSRGAEPGAQPGA HHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC GLGLSIVASIVRAHGGSVRAVSRPEGGLEMAVFLPTRESA CCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure SVRIRLALMCGGLFLLSGVVLLAVNYILVRSALPPAAAPVAHAFEGTIAMPGQSGPGLP CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEECCCCCCCCCC GTVGTGSGPETGVLTVVSAVRNYRGGVLNTLLVQSGVAIGATLILALLLGWVVADRTLRP CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH VQAVVATARRLGADNLDARIRLRGPRDELTELADTFDEMLDRLAASFDSQRRFVANASHE HHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LRTPLAAQRTLVEVAMGRPGAEPALRELGTRLLTMNVRIEALIEGLLVLARSDRGLAARQ HHCCHHHHHHHHHHHHCCCCCCHHHHHHCHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHH VVCLDEVVETVVDTHRAVAAEAGVDLRWERTGRDRPARPPDLVWGDRVLLERMVSNLVDN HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AIKYNRRGGTVWVRDGRDPVLWVANTGPPVPSSSAADLFEPFSQAGRGSRGAEPGAQPGA HHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC GLGLSIVASIVRAHGGSVRAVSRPEGGLEMAVFLPTRESA CCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]