| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pur8 [H]
Identifier: 158318676
GI number: 158318676
Start: 8461147
End: 8462643
Strand: Direct
Name: pur8 [H]
Synonym: Franean1_6944
Alternate gene names: 158318676
Gene position: 8461147-8462643 (Clockwise)
Preceding gene: 158318672
Following gene: 158318678
Centisome position: 94.2
GC content: 70.34
Gene sequence:
>1497_bases ATGACCTTCACCGACTCCCGCACAACACACCAGGAGCCCGCGGCCACCGACGGGATCAACCCTGATCATCCTCGACGCTG GTGGATCCTCGCTGTTCTCGGGGTCGCGCAGCTGATGGTCATCCTCGACACGACGATCGTCAACATCGCGATGCCCTCGG CCCAGCGCGACCTGGGTTTCTCTGACGGTGCGAGGCAGTGGGTCATAACCGCCTACGCGCTGGCGTTCGGCAGTCTGCTG CTGCTCGGCGGGCGCATCGCCGACCTGTTCGGCCGCAGGATGGCGCTGCTGGCCGGGTTGGCCGGCTTCGCCGCGGCCTC CGCCGTCGGCGGGGCGGCCGTCAATTTCGGCATGCTGGTCGCCGCCCGTGCCAGCCAGGGCATGTTCGGCGCGCTGCTGG CGCCCGCCGGCCTGTCCCTGTTGTCGACGACCTTCACCGAAACGCGGGAACGCGCCCGGGCGTTCGGCATCTACGGTGCG ATCGCCGGCGCGGGCGGTGCGGTCGGCCTGCTGCTCGGTGGAGTCCTCACCGAATACCTCGACTGGCGCTGGTGCCTGTA CGTCAACCTGGTCTTCGCCGCGGTGGCGATAGCCGGTGCGGCCGGCCTGATTCGCCGCCAGACCGTCGACGGACATCCGG CCCTCGACCTGCCCGGTACTCTTGCTGTCTGCGCCGGCCTGTTCAGCCTGGTCTACGGCTTCGCCAACGCGCAGACCCAT TCCTGGTCCGCTCCGGGCGCCTGGGCCCTGCTCCTCACCGGAGCCGCACTGCTGGCGCTGTTCGTGGCCCTGGAGACAAA GGTCGCGCATCCCCTGCTCCCGATGCGGGTCCTGCTCGACCGCAATCGCGCCGGCGCCTACCTGACGGTCTTCGTCGTCG GCGTCGGCGTGTTCGGGATCTTTCTCTTCCTGACCTACTACCTCCAGCAGAACCTCGGATTCTCGCCCATCCGTACCGGG CTGGCGTTCCTCCCGATCGTCGGCGCGGTGATGATCACCGCCACCGTGGCGACCAGTGTCCTGTTTCCCCGGGTCGGTCC ACGGCCGCTGATAGGCCTCGGCATGCTCACCGCCGCGGGCGGCATGCTGTGGCTCACCACGCTCGAGGTCCACAGCACCT ACCTGGCCGACATCCTGCCCGCCCTCGTCATCGCCGGAGTCGGACTGGGGCTGGCGATGGCGCCGGCCATGAGCACCGCC ACGGCGGGTGTCGAGCCCGACGACGCCGGGGTGGCCTCGGCGACCGTCAACACCGCGCAGCAGATCGGCGGGTCCATCGG CATCGCCGTGCTCAGCACCATCGCCGCCACCGCCGCCAGTGACTACGCCCGCGGCAGGGCACCCGGCGCCGACCTGCTCG CCCGTGCCGCCGTCCACAGCTACACCACCGCCTTCGCCTGGTCGGCAGCGATCTTCGCCGCGGGTGCCGTCCTCTGTGGG CTGCTCGTCCGGCCCGGCGTCCCGGACACCACCGAGGTCACCAGCGCCGGGCTGTGA
Upstream 100 bases:
>100_bases GGCCCATTCCCACACCGGGGCCCAGCCAGGTCCCGGCCCATCTCACCCCGAGAGTCAGCAGGGTTCCGAACAGGCACGAC ACATGGACAGGGCGGTCGCC
Downstream 100 bases:
>100_bases CTTGCCGGCACCGGATCGCCGGGCCGGGCCGGCGCCGGTCGTGGTCGCGTCAGGCGGGCGACGGCTGCCGCGCCCGCCTG ACGCGACCGGGGAGCGCTGT
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTFTDSRTTHQEPAATDGINPDHPRRWWILAVLGVAQLMVILDTTIVNIAMPSAQRDLGFSDGARQWVITAYALAFGSLL LLGGRIADLFGRRMALLAGLAGFAAASAVGGAAVNFGMLVAARASQGMFGALLAPAGLSLLSTTFTETRERARAFGIYGA IAGAGGAVGLLLGGVLTEYLDWRWCLYVNLVFAAVAIAGAAGLIRRQTVDGHPALDLPGTLAVCAGLFSLVYGFANAQTH SWSAPGAWALLLTGAALLALFVALETKVAHPLLPMRVLLDRNRAGAYLTVFVVGVGVFGIFLFLTYYLQQNLGFSPIRTG LAFLPIVGAVMITATVATSVLFPRVGPRPLIGLGMLTAAGGMLWLTTLEVHSTYLADILPALVIAGVGLGLAMAPAMSTA TAGVEPDDAGVASATVNTAQQIGGSIGIAVLSTIAATAASDYARGRAPGADLLARAAVHSYTTAFAWSAAIFAAGAVLCG LLVRPGVPDTTEVTSAGL
Sequences:
>Translated_498_residues MTFTDSRTTHQEPAATDGINPDHPRRWWILAVLGVAQLMVILDTTIVNIAMPSAQRDLGFSDGARQWVITAYALAFGSLL LLGGRIADLFGRRMALLAGLAGFAAASAVGGAAVNFGMLVAARASQGMFGALLAPAGLSLLSTTFTETRERARAFGIYGA IAGAGGAVGLLLGGVLTEYLDWRWCLYVNLVFAAVAIAGAAGLIRRQTVDGHPALDLPGTLAVCAGLFSLVYGFANAQTH SWSAPGAWALLLTGAALLALFVALETKVAHPLLPMRVLLDRNRAGAYLTVFVVGVGVFGIFLFLTYYLQQNLGFSPIRTG LAFLPIVGAVMITATVATSVLFPRVGPRPLIGLGMLTAAGGMLWLTTLEVHSTYLADILPALVIAGVGLGLAMAPAMSTA TAGVEPDDAGVASATVNTAQQIGGSIGIAVLSTIAATAASDYARGRAPGADLLARAAVHSYTTAFAWSAAIFAAGAVLCG LLVRPGVPDTTEVTSAGL >Mature_497_residues TFTDSRTTHQEPAATDGINPDHPRRWWILAVLGVAQLMVILDTTIVNIAMPSAQRDLGFSDGARQWVITAYALAFGSLLL LGGRIADLFGRRMALLAGLAGFAAASAVGGAAVNFGMLVAARASQGMFGALLAPAGLSLLSTTFTETRERARAFGIYGAI AGAGGAVGLLLGGVLTEYLDWRWCLYVNLVFAAVAIAGAAGLIRRQTVDGHPALDLPGTLAVCAGLFSLVYGFANAQTHS WSAPGAWALLLTGAALLALFVALETKVAHPLLPMRVLLDRNRAGAYLTVFVVGVGVFGIFLFLTYYLQQNLGFSPIRTGL AFLPIVGAVMITATVATSVLFPRVGPRPLIGLGMLTAAGGMLWLTTLEVHSTYLADILPALVIAGVGLGLAMAPAMSTAT AGVEPDDAGVASATVNTAQQIGGSIGIAVLSTIAATAASDYARGRAPGADLLARAAVHSYTTAFAWSAAIFAAGAVLCGL LVRPGVPDTTEVTSAGL
Specific function: May be involved in active puromycin efflux energized by a proton-dependent electrochemical gradient. In addition, it could be implicated in secreting N-acetylpuromycin, the last intermediate of the puromycin biosynthesis pathway, to the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=417, Percent_Identity=26.8585131894484, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1789042, Length=412, Percent_Identity=24.5145631067961, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1788710, Length=412, Percent_Identity=21.8446601941748, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1790195, Length=421, Percent_Identity=26.8408551068884, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788392, Length=417, Percent_Identity=26.8585131894484, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324954, Length=385, Percent_Identity=25.1948051948052, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6323520, Length=459, Percent_Identity=23.3115468409586, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323935, Length=419, Percent_Identity=26.0143198090692, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322958, Length=476, Percent_Identity=22.4789915966387, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51108; Mature: 50977
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTDSRTTHQEPAATDGINPDHPRRWWILAVLGVAQLMVILDTTIVNIAMPSAQRDLGF CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC SDGARQWVITAYALAFGSLLLLGGRIADLFGRRMALLAGLAGFAAASAVGGAAVNFGMLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AARASQGMFGALLAPAGLSLLSTTFTETRERARAFGIYGAIAGAGGAVGLLLGGVLTEYL HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DWRWCLYVNLVFAAVAIAGAAGLIRRQTVDGHPALDLPGTLAVCAGLFSLVYGFANAQTH CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SWSAPGAWALLLTGAALLALFVALETKVAHPLLPMRVLLDRNRAGAYLTVFVVGVGVFGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FLFLTYYLQQNLGFSPIRTGLAFLPIVGAVMITATVATSVLFPRVGPRPLIGLGMLTAAG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC GMLWLTTLEVHSTYLADILPALVIAGVGLGLAMAPAMSTATAGVEPDDAGVASATVNTAQ CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH QIGGSIGIAVLSTIAATAASDYARGRAPGADLLARAAVHSYTTAFAWSAAIFAAGAVLCG HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVRPGVPDTTEVTSAGL HHHCCCCCCCCCHHCCCC >Mature Secondary Structure TFTDSRTTHQEPAATDGINPDHPRRWWILAVLGVAQLMVILDTTIVNIAMPSAQRDLGF CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC SDGARQWVITAYALAFGSLLLLGGRIADLFGRRMALLAGLAGFAAASAVGGAAVNFGMLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AARASQGMFGALLAPAGLSLLSTTFTETRERARAFGIYGAIAGAGGAVGLLLGGVLTEYL HHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DWRWCLYVNLVFAAVAIAGAAGLIRRQTVDGHPALDLPGTLAVCAGLFSLVYGFANAQTH CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SWSAPGAWALLLTGAALLALFVALETKVAHPLLPMRVLLDRNRAGAYLTVFVVGVGVFGI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH FLFLTYYLQQNLGFSPIRTGLAFLPIVGAVMITATVATSVLFPRVGPRPLIGLGMLTAAG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC GMLWLTTLEVHSTYLADILPALVIAGVGLGLAMAPAMSTATAGVEPDDAGVASATVNTAQ CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH QIGGSIGIAVLSTIAATAASDYARGRAPGADLLARAAVHSYTTAFAWSAAIFAAGAVLCG HCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVRPGVPDTTEVTSAGL HHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7916693 [H]