| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cat2 [H]
Identifier: 158318672
GI number: 158318672
Start: 8455500
End: 8457038
Strand: Direct
Name: cat2 [H]
Synonym: Franean1_6940
Alternate gene names: 158318672
Gene position: 8455500-8457038 (Clockwise)
Preceding gene: 158318670
Following gene: 158318676
Centisome position: 94.14
GC content: 71.8
Gene sequence:
>1539_bases GTGGCCGAAGCATCCACACCGACGACGATCTCGGTCATCTCAGCCCTCCCCACCGACCTCCGGAGATCCGTATACAACAC GTTTTCCCCTTCACACCCAGCAGATCTGGCCTTTCCGTCCCGCACCGGACATGACCAAGGACTCGTGGCGGGGAACGGAC GTCCCTGGACCGCCGCGGCCGGCCGACCCGCCGGCCGGGCCGCTCGGGGCACCCGGGACGATGCGGACATGCGGATCGTG AGTGAGCCAGTGCTCGTGGACCTGCTCGCCGCTCGGCTGGCGGACCGACCGGACCGGCCGAACGGGCCGGAGCGGCCGGA CCGGCCGCCACTGATCGTCGCGGCGGGCAACTTCGCCACTCCGACCGTCGCGGTGGGCGCGCTCGACCGCGCGCTGTCCG CGTACCGTCTCTTCGTCCTCAACGCCCAGCACGGCGTCCCCGAACGGCCCGGTGTAACGCCGGTGACGCCGTTCGTCGGC CCCGGGATGCGGGAACACCGCGCGCTGGAGTACCTGCCCTGCCGGCTGAGCATGGTCCCCCGGCTGTTCACCGGCGCGCA CCGCCCCGACGCCGTCATCCTGCACACCAGCCGGCCAGTTGACGGGAAGGTGTCGATGGGCACCGAGGTCAACATCCTGC CGGCCGCCGTCGAAGCCGTCCGGAGCTCCGGTGGTCTGGTCATCGCCCAGACCAACTCCCGGATGCCCTACACCTTCGGT GACGGCGAGCTCTCCTGCGACGAGGTGGACCTCGCCCTGGAGGTCGACGTACCGCTGGCCAGCCCCGCTTTCAGGCAGAC GAGCGACATCCACCACGAGATCGGCGCCCGGGTCGCCGCGCTGGTGGCCGACGGCGCGACCCTGCAGCTCGGCATCGGCG CCGTCCCCGACGCCACTCTCGCGGCGCTCACCGGGGGACGACGCCTGCGGGTGTGGACGGAGACGTTCTCCGACGGCGTG CTGGCACTCGACCGCTCGGGTGCCCTGGCCGCGGACGCTGAGCTGGTCACCAGCTTCGTGTTCGGCTCAGGCGAGCTGTA CGCCTGGCTCGACCGCAACTCCCGGGTCCGGCTGCTGCGCACCGAGACCGTCAACGACCCCGGGACCATCGCCCGCCAGC CCGGGATGACGTCGATCAACACCGCGCTGCAGATCGACCTGCACGCCCAGGCCAACGCCTCGTTCGTACGCGGGCGCGTG TGGTCGGGCTTCGGCGGGCAGCCCGACTTCGTCACCGGAGCACTGCACGCCACCGGCGGACGAGCGATCATCGCCCTGCC CAGCTGGCACAGCAAGACCGGCCGGTCGACGGTCGTCCGGGCGCTGGCCGAGCCGACCACAAGTTTCCAGCACAGCCATG TCATCAGCGAGCACGGCACCGCGCAGCTGTGGGGCAGAGGGCAGGAGCAGCAGGCCCGCGACCTCATCGAGCACGTCGCG CACCCGGCGGCTCGCCCCGGCCTGCGGGAAGCCGGGGCGGAAGGGCACACGGACGGAAGGGATGCCGGGCGGGCGGAAGG ATCGGAGCTGCCGGCCTGA
Upstream 100 bases:
>100_bases GGCCACCGGAAGGCCACCTCCGGTCCAGGCCAGGACCGCCCGCACCCCGATGCGGCGCAGGCGGGCCTCCGTCAGCGCCC AGCGCAGGGCGGACACCGAC
Downstream 100 bases:
>100_bases TCCCCCCGCTCGCATCGCTTCCCCGGGCCCGCGATCACCGCTGGCCTCCGAGGTCAGCCCCGCCCTGACGCCATCCCGGT CCGGGCCGCGTCGAGGAGGA
Product: Acetyl-CoA hydrolase-like protein
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MAEASTPTTISVISALPTDLRRSVYNTFSPSHPADLAFPSRTGHDQGLVAGNGRPWTAAAGRPAGRAARGTRDDADMRIV SEPVLVDLLAARLADRPDRPNGPERPDRPPLIVAAGNFATPTVAVGALDRALSAYRLFVLNAQHGVPERPGVTPVTPFVG PGMREHRALEYLPCRLSMVPRLFTGAHRPDAVILHTSRPVDGKVSMGTEVNILPAAVEAVRSSGGLVIAQTNSRMPYTFG DGELSCDEVDLALEVDVPLASPAFRQTSDIHHEIGARVAALVADGATLQLGIGAVPDATLAALTGGRRLRVWTETFSDGV LALDRSGALAADAELVTSFVFGSGELYAWLDRNSRVRLLRTETVNDPGTIARQPGMTSINTALQIDLHAQANASFVRGRV WSGFGGQPDFVTGALHATGGRAIIALPSWHSKTGRSTVVRALAEPTTSFQHSHVISEHGTAQLWGRGQEQQARDLIEHVA HPAARPGLREAGAEGHTDGRDAGRAEGSELPA
Sequences:
>Translated_512_residues MAEASTPTTISVISALPTDLRRSVYNTFSPSHPADLAFPSRTGHDQGLVAGNGRPWTAAAGRPAGRAARGTRDDADMRIV SEPVLVDLLAARLADRPDRPNGPERPDRPPLIVAAGNFATPTVAVGALDRALSAYRLFVLNAQHGVPERPGVTPVTPFVG PGMREHRALEYLPCRLSMVPRLFTGAHRPDAVILHTSRPVDGKVSMGTEVNILPAAVEAVRSSGGLVIAQTNSRMPYTFG DGELSCDEVDLALEVDVPLASPAFRQTSDIHHEIGARVAALVADGATLQLGIGAVPDATLAALTGGRRLRVWTETFSDGV LALDRSGALAADAELVTSFVFGSGELYAWLDRNSRVRLLRTETVNDPGTIARQPGMTSINTALQIDLHAQANASFVRGRV WSGFGGQPDFVTGALHATGGRAIIALPSWHSKTGRSTVVRALAEPTTSFQHSHVISEHGTAQLWGRGQEQQARDLIEHVA HPAARPGLREAGAEGHTDGRDAGRAEGSELPA >Mature_511_residues AEASTPTTISVISALPTDLRRSVYNTFSPSHPADLAFPSRTGHDQGLVAGNGRPWTAAAGRPAGRAARGTRDDADMRIVS EPVLVDLLAARLADRPDRPNGPERPDRPPLIVAAGNFATPTVAVGALDRALSAYRLFVLNAQHGVPERPGVTPVTPFVGP GMREHRALEYLPCRLSMVPRLFTGAHRPDAVILHTSRPVDGKVSMGTEVNILPAAVEAVRSSGGLVIAQTNSRMPYTFGD GELSCDEVDLALEVDVPLASPAFRQTSDIHHEIGARVAALVADGATLQLGIGAVPDATLAALTGGRRLRVWTETFSDGVL ALDRSGALAADAELVTSFVFGSGELYAWLDRNSRVRLLRTETVNDPGTIARQPGMTSINTALQIDLHAQANASFVRGRVW SGFGGQPDFVTGALHATGGRAIIALPSWHSKTGRSTVVRALAEPTTSFQHSHVISEHGTAQLWGRGQEQQARDLIEHVAH PAARPGLREAGAEGHTDGRDAGRAEGSELPA
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=208, Percent_Identity=27.4038461538462, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32563853, Length=341, Percent_Identity=41.6422287390029, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17538151, Length=413, Percent_Identity=33.6561743341404, Blast_Score=181, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6319456, Length=206, Percent_Identity=32.0388349514563, Blast_Score=84, Evalue=5e-17, Organism=Drosophila melanogaster, GI21358615, Length=411, Percent_Identity=33.8199513381995, Blast_Score=199, Evalue=4e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 54155; Mature: 54024
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEASTPTTISVISALPTDLRRSVYNTFSPSHPADLAFPSRTGHDQGLVAGNGRPWTAAA CCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCC GRPAGRAARGTRDDADMRIVSEPVLVDLLAARLADRPDRPNGPERPDRPPLIVAAGNFAT CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC PTVAVGALDRALSAYRLFVLNAQHGVPERPGVTPVTPFVGPGMREHRALEYLPCRLSMVP CHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH RLFTGAHRPDAVILHTSRPVDGKVSMGTEVNILPAAVEAVRSSGGLVIAQTNSRMPYTFG HHHCCCCCCCEEEEECCCCCCCCEECCCEEEEHHHHHHHHHCCCCEEEEECCCCCCEEEC DGELSCDEVDLALEVDVPLASPAFRQTSDIHHEIGARVAALVADGATLQLGIGAVPDATL CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEHEECCCEEEEECCCCCCHHH AALTGGRRLRVWTETFSDGVLALDRSGALAADAELVTSFVFGSGELYAWLDRNSRVRLLR HHHCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEE TETVNDPGTIARQPGMTSINTALQIDLHAQANASFVRGRVWSGFGGQPDFVTGALHATGG ECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECEEECCCCCCCCEEEEEEECCCC RAIIALPSWHSKTGRSTVVRALAEPTTSFQHSHVISEHGTAQLWGRGQEQQARDLIEHVA EEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH HPAARPGLREAGAEGHTDGRDAGRAEGSELPA CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEASTPTTISVISALPTDLRRSVYNTFSPSHPADLAFPSRTGHDQGLVAGNGRPWTAAA CCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCC GRPAGRAARGTRDDADMRIVSEPVLVDLLAARLADRPDRPNGPERPDRPPLIVAAGNFAT CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC PTVAVGALDRALSAYRLFVLNAQHGVPERPGVTPVTPFVGPGMREHRALEYLPCRLSMVP CHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH RLFTGAHRPDAVILHTSRPVDGKVSMGTEVNILPAAVEAVRSSGGLVIAQTNSRMPYTFG HHHCCCCCCCEEEEECCCCCCCCEECCCEEEEHHHHHHHHHCCCCEEEEECCCCCCEEEC DGELSCDEVDLALEVDVPLASPAFRQTSDIHHEIGARVAALVADGATLQLGIGAVPDATL CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHEEHEECCCEEEEECCCCCCHHH AALTGGRRLRVWTETFSDGVLALDRSGALAADAELVTSFVFGSGELYAWLDRNSRVRLLR HHHCCCCEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEE TETVNDPGTIARQPGMTSINTALQIDLHAQANASFVRGRVWSGFGGQPDFVTGALHATGG ECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEECEEECCCCCCCCEEEEEEECCCC RAIIALPSWHSKTGRSTVVRALAEPTTSFQHSHVISEHGTAQLWGRGQEQQARDLIEHVA EEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHH HPAARPGLREAGAEGHTDGRDAGRAEGSELPA CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]