The gene/protein map for NC_009921 is currently unavailable.
Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318664

Identifier: 158318664

GI number: 158318664

Start: 8444335

End: 8445906

Strand: Reverse

Name: 158318664

Synonym: Franean1_6932

Alternate gene names: NA

Gene position: 8445906-8444335 (Counterclockwise)

Preceding gene: 158318665

Following gene: 158318660

Centisome position: 94.03

GC content: 72.71

Gene sequence:

>1572_bases
ATGCTGGTTCAGAAGAATTCGGTGCCGGACAAAGTGGATCTCGCTTCCGATTTCTCTGGAGAGCTGGAGGCCGGGGCGAC
GGAGAAGCAGCCGGCCCCGGAACTCCATCTGGACAACCGGGAGACCGTGGAGACGCACACTGCGATCCTTTTCCTGACCG
AGGACCGCGTTTACAAGCTGCGCAAGCCGGTCGACCTCGGCTTCGTGGATCTCCGCACCCGGCACGCGCGGCTCACGGCC
TGCGAGGACGAGGTGCGTCTCAACCGGCGGCTGGCCCCGGACGTGTACCTCGGCGTCGCCGACATCCGGGACGAAGAGGG
TCACCCGCGCGACCACATGGTCGTGATGCGCCGGATGCCCGCCGACCGCCGGCTGTCGGAGCTGGTGCGCGGCGGCGCCG
ACCTGACCGGCGAGCTGCGCGTGATCGCCCGCACGATGGCGGCGTTCCACGAGCGGTGCGAGACCTCACCGGAGATCTCC
CGGGCCGGTGGGCTCGCCAACCTGGAGGCGCTGTGGCTGGAGGCGATGGACGCCGTCGCGCCCTTCCGCGGCTCGATCCT
GGACGCCGGCACCGTCGACGAGATCGGCCGGCTGGCCCTGCGGTACCTGGCCGGCCGGGCGCCCCTGCTGGCGGAGCGGC
AGCGCGCCGGGCGGATCCGCGACGGGCACGGTGACCTGCTCGCCGACGACATCTACTGCCTGGACGACGGCCCGCGGGTG
CTGGACTGCATCAACTTCGACCGCCGGCTGCGGGTCGGTGACGTCCTCGCCGACGTCGCGTTCCTCGCGATGGACCTGGA
GCGGCTCGGCGCCCCGGCGGCGGCCCGGACGTTCCTCGACGCGTACCGGGAGTTCTCCGGCGAGACCCATCCGGCGTCCC
TGGAGCACCTCTACATCGCCTACCGGGCGTTCGTCCGGGTGCGCATCGCGTGCATCCGCGACCACCAGGGCGATCCGGAG
GCCGCCGAGGAGGCTCGCCGGCTCGCCGACATCGCGCTGGCGCATCTCCGCCGGGGCCGGGTGCGGCTGGTGCTGGTCGG
CGGGCTGCCCGGCACGGGCAAGTCGACGCTGGCGAGCGGCCTGGCCGACGGGCAGGACGAATGGGTGCTGCTGCGCTCGG
ACGTGGTGCGCAAGGAACTGGCCGGACTGGCCCCGGACATCGCGGTCGACGTCGCCCCCGGTGCGGGGATCTACGGTGTC
GAGGCGACCGAGCACAGCTACGCCGAGTTGATCGCGAGGGCGCGGCAGGCGCTGGAGCGCGGCCAGAGCGTCGTGCTCGA
CGCATCCTGGTCCTCCGGGCTGTTCCGGGAACTCGCTGCCGAAACCGCGAAGGCGACCGGCGCCGACCTGGCGCAGGTGC
GCTGTGTGGCCCCGGCGCCGGTCGCCGTCGCCCGCATCGAGTCCCGGCGGTCCATGCGGGCTCGCGGGACCGGTGCGGAC
GCCTCGGACGCGACGGGCGTGATTCACGCGGCGATGGCCGATCGCGCCGACCTCTGGCCGGCCGCGTTCGAGATCGACAC
CACGGGGTCTGTCGAGGAGACGGTCGCTGCCGCCCGGCGGGTCGTCGACTGA

Upstream 100 bases:

>100_bases
ATGACGGACGATCCCGGAGCCCGGACCACTCGGCCGGCACCGGTGAACCACACGTCGATGGTCGTGGCGATATCGTCCCG
AAAACGTCTGGAGACGTCGG

Downstream 100 bases:

>100_bases
CACCCGGGCGGTGCCCGGCGTCGCCGCTGAGTTTCAGGCGGCGCTTGGCGCCGCCGTCCCCCGAAGGGGTTCACCGACCG
ACGCACCGGTGGACGCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLVQKNSVPDKVDLASDFSGELEAGATEKQPAPELHLDNRETVETHTAILFLTEDRVYKLRKPVDLGFVDLRTRHARLTA
CEDEVRLNRRLAPDVYLGVADIRDEEGHPRDHMVVMRRMPADRRLSELVRGGADLTGELRVIARTMAAFHERCETSPEIS
RAGGLANLEALWLEAMDAVAPFRGSILDAGTVDEIGRLALRYLAGRAPLLAERQRAGRIRDGHGDLLADDIYCLDDGPRV
LDCINFDRRLRVGDVLADVAFLAMDLERLGAPAAARTFLDAYREFSGETHPASLEHLYIAYRAFVRVRIACIRDHQGDPE
AAEEARRLADIALAHLRRGRVRLVLVGGLPGTGKSTLASGLADGQDEWVLLRSDVVRKELAGLAPDIAVDVAPGAGIYGV
EATEHSYAELIARARQALERGQSVVLDASWSSGLFRELAAETAKATGADLAQVRCVAPAPVAVARIESRRSMRARGTGAD
ASDATGVIHAAMADRADLWPAAFEIDTTGSVEETVAAARRVVD

Sequences:

>Translated_523_residues
MLVQKNSVPDKVDLASDFSGELEAGATEKQPAPELHLDNRETVETHTAILFLTEDRVYKLRKPVDLGFVDLRTRHARLTA
CEDEVRLNRRLAPDVYLGVADIRDEEGHPRDHMVVMRRMPADRRLSELVRGGADLTGELRVIARTMAAFHERCETSPEIS
RAGGLANLEALWLEAMDAVAPFRGSILDAGTVDEIGRLALRYLAGRAPLLAERQRAGRIRDGHGDLLADDIYCLDDGPRV
LDCINFDRRLRVGDVLADVAFLAMDLERLGAPAAARTFLDAYREFSGETHPASLEHLYIAYRAFVRVRIACIRDHQGDPE
AAEEARRLADIALAHLRRGRVRLVLVGGLPGTGKSTLASGLADGQDEWVLLRSDVVRKELAGLAPDIAVDVAPGAGIYGV
EATEHSYAELIARARQALERGQSVVLDASWSSGLFRELAAETAKATGADLAQVRCVAPAPVAVARIESRRSMRARGTGAD
ASDATGVIHAAMADRADLWPAAFEIDTTGSVEETVAAARRVVD
>Mature_523_residues
MLVQKNSVPDKVDLASDFSGELEAGATEKQPAPELHLDNRETVETHTAILFLTEDRVYKLRKPVDLGFVDLRTRHARLTA
CEDEVRLNRRLAPDVYLGVADIRDEEGHPRDHMVVMRRMPADRRLSELVRGGADLTGELRVIARTMAAFHERCETSPEIS
RAGGLANLEALWLEAMDAVAPFRGSILDAGTVDEIGRLALRYLAGRAPLLAERQRAGRIRDGHGDLLADDIYCLDDGPRV
LDCINFDRRLRVGDVLADVAFLAMDLERLGAPAAARTFLDAYREFSGETHPASLEHLYIAYRAFVRVRIACIRDHQGDPE
AAEEARRLADIALAHLRRGRVRLVLVGGLPGTGKSTLASGLADGQDEWVLLRSDVVRKELAGLAPDIAVDVAPGAGIYGV
EATEHSYAELIARARQALERGQSVVLDASWSSGLFRELAAETAKATGADLAQVRCVAPAPVAVARIESRRSMRARGTGAD
ASDATGVIHAAMADRADLWPAAFEIDTTGSVEETVAAARRVVD

Specific function: Some isolated peptides of this protein are able to bind to human U937 monocytoblastic and A549 epithelial cell lines [H]

COG id: COG2187

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR010488 [H]

Pfam domain/function: PF06414 Zeta_toxin [H]

EC number: NA

Molecular weight: Translated: 56913; Mature: 56913

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVQKNSVPDKVDLASDFSGELEAGATEKQPAPELHLDNRETVETHTAILFLTEDRVYKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHH
RKPVDLGFVDLRTRHARLTACEDEVRLNRRLAPDVYLGVADIRDEEGHPRDHMVVMRRMP
CCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCHHEEEHHHCCCCCCCCHHHHHHHHHCC
ADRRLSELVRGGADLTGELRVIARTMAAFHERCETSPEISRAGGLANLEALWLEAMDAVA
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHC
PFRGSILDAGTVDEIGRLALRYLAGRAPLLAERQRAGRIRDGHGDLLADDIYCLDDGPRV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCEEEECCCCCE
LDCINFDRRLRVGDVLADVAFLAMDLERLGAPAAARTFLDAYREFSGETHPASLEHLYIA
EHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YRAFVRVRIACIRDHQGDPEAAEEARRLADIALAHLRRGRVRLVLVGGLPGTGKSTLASG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
LADGQDEWVLLRSDVVRKELAGLAPDIAVDVAPGAGIYGVEATEHSYAELIARARQALER
CCCCCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHC
GQSVVLDASWSSGLFRELAAETAKATGADLAQVRCVAPAPVAVARIESRRSMRARGTGAD
CCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC
ASDATGVIHAAMADRADLWPAAFEIDTTGSVEETVAAARRVVD
CCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLVQKNSVPDKVDLASDFSGELEAGATEKQPAPELHLDNRETVETHTAILFLTEDRVYKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHHHH
RKPVDLGFVDLRTRHARLTACEDEVRLNRRLAPDVYLGVADIRDEEGHPRDHMVVMRRMP
CCCCCCCEEHHHHHHHHHHCCHHHHHHHHCCCCHHEEEHHHCCCCCCCCHHHHHHHHHCC
ADRRLSELVRGGADLTGELRVIARTMAAFHERCETSPEISRAGGLANLEALWLEAMDAVA
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHC
PFRGSILDAGTVDEIGRLALRYLAGRAPLLAERQRAGRIRDGHGDLLADDIYCLDDGPRV
CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCEEECCEEEECCCCCE
LDCINFDRRLRVGDVLADVAFLAMDLERLGAPAAARTFLDAYREFSGETHPASLEHLYIA
EHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YRAFVRVRIACIRDHQGDPEAAEEARRLADIALAHLRRGRVRLVLVGGLPGTGKSTLASG
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHH
LADGQDEWVLLRSDVVRKELAGLAPDIAVDVAPGAGIYGVEATEHSYAELIARARQALER
CCCCCCCEEEHHHHHHHHHHHCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHC
GQSVVLDASWSSGLFRELAAETAKATGADLAQVRCVAPAPVAVARIESRRSMRARGTGAD
CCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCCC
ASDATGVIHAAMADRADLWPAAFEIDTTGSVEETVAAARRVVD
CCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]