| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318651
Identifier: 158318651
GI number: 158318651
Start: 8427155
End: 8428345
Strand: Reverse
Name: 158318651
Synonym: Franean1_6919
Alternate gene names: NA
Gene position: 8428345-8427155 (Counterclockwise)
Preceding gene: 158318653
Following gene: 158318650
Centisome position: 93.84
GC content: 66.08
Gene sequence:
>1191_bases GTGGCTCACGCCGGTATCTCGGTGTTCGACGCGGACAACCATCTGTATGAGACGAAGGAGGCGCTGACGAAGTACCTGCC CGCCCGGTACAAGGGGGCGGTCGACTACGTCGAGCTCAACGGGCGCACGAAGATTATGGTCCGGGGCCAGGTGAGCGAGT ACATCCCGAACCCCACGTTCGAGGTCGTGGCCCGGCCCGGTGCGCAGGAGGACTACTACCGGAAGGGGAACCCCGAGGGG CTGTCCCGCCGGGAGATCTTCGGCAAGCCGGTGAAGTGCATCGACGCGTGGCGCGAGCCCGCCGCCCGGCTTGCGAAAAT GGACGAGCAGGGCCTCGACCGCACACTGATGTTCCCGACGCTGGCCAGCCTCATCGAGGAGCGGATGCGGGACGACCCGG ACCTGATCCACGCGGTCATCCACTCCCTCAACGAGTGGTTGTACGAGACCTGGCAGTTCAACTACGAGGGGCTGGACCGG ATTTTCACGACTCCGGTGATCACCCTGCCGTTCGTGGACAAGGCGATCGAGGAACTGGAGTGGGTCCTCGAGCGGGGCGC CAAGGTCGTGCTGATCCGTCCGGCGCCGGTGCCCGGGCTCCGCGGCCCTCGCTCGTTCGGCCTGCCCGAGTTCGACCCGT TCTGGGCGCGGGTGCAGGAGGCCGGCATCCTGGTCGCGATGCACTCCTCGGACAGCGGCTACGCCCGTTACACGAGTGAG TGGATGGGCGCGACCACCGAGATGCTCCCCTTCCAGCCGAACACCTTCCGCATGCTGCAGGCCTGGCGCCCGGTCGAGGA CGCCGTCTCGGCGCTGGTGTGCCACGGTGCGCTGTCCCGTTTCCCGGGGCTGAAGATCGCCATCGTCGAGAACGGTATGA GCTGGGTCGAGCCGCTGCTCAAGTCCATGAAGAACCTCTACAAGAAGATGCCGCACGACTTCCTGGAAAACCCGGTCGAC GTGCTCAAGCGGAACATCTACGTGAGCCCGTTCTGGGAGGAGGACCTCGGCGAACTGGCCCAACTCCTCGGCGAGGACCA CGTGCTGTTCGGCTCGGACTACCCGCACCCGGAGGGCCTGGCCAACCCGGTGAGTTACATCGACGAGCTGTCGCACCTGC CGGAGGAGCTCGTCCGCAAGATCATGGGTGGCAACCTCGCCCAGCTCATGGGCATCGGCGTTCCCGCCTAG
Upstream 100 bases:
>100_bases CCGACGCTGCTCGGTCCGCCGTCGCGATCTGCTGGCGTCGCGGACCACCGAAGTGTAGGGAGGATAGGGACGTCCATCGC AGACAAGCAAGGGAGGGCCC
Downstream 100 bases:
>100_bases CACGGCCGGCGACAGCACGGCCGGCGACAGCACGGCCAGCGGCAGAACGAGGAGCACTACCGAGACCGCTGACGAACGCG GTGGGTCCCCTGGGCTCGCC
Product: amidohydrolase 2
Products: NA
Alternate protein names: Amidohydrolase Family Protein; Amidase; Metal-Dependent Hydrolase; Barh Protein; Amidohydrolase 2 Protein; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAHAGISVFDADNHLYETKEALTKYLPARYKGAVDYVELNGRTKIMVRGQVSEYIPNPTFEVVARPGAQEDYYRKGNPEG LSRREIFGKPVKCIDAWREPAARLAKMDEQGLDRTLMFPTLASLIEERMRDDPDLIHAVIHSLNEWLYETWQFNYEGLDR IFTTPVITLPFVDKAIEELEWVLERGAKVVLIRPAPVPGLRGPRSFGLPEFDPFWARVQEAGILVAMHSSDSGYARYTSE WMGATTEMLPFQPNTFRMLQAWRPVEDAVSALVCHGALSRFPGLKIAIVENGMSWVEPLLKSMKNLYKKMPHDFLENPVD VLKRNIYVSPFWEEDLGELAQLLGEDHVLFGSDYPHPEGLANPVSYIDELSHLPEELVRKIMGGNLAQLMGIGVPA
Sequences:
>Translated_396_residues MAHAGISVFDADNHLYETKEALTKYLPARYKGAVDYVELNGRTKIMVRGQVSEYIPNPTFEVVARPGAQEDYYRKGNPEG LSRREIFGKPVKCIDAWREPAARLAKMDEQGLDRTLMFPTLASLIEERMRDDPDLIHAVIHSLNEWLYETWQFNYEGLDR IFTTPVITLPFVDKAIEELEWVLERGAKVVLIRPAPVPGLRGPRSFGLPEFDPFWARVQEAGILVAMHSSDSGYARYTSE WMGATTEMLPFQPNTFRMLQAWRPVEDAVSALVCHGALSRFPGLKIAIVENGMSWVEPLLKSMKNLYKKMPHDFLENPVD VLKRNIYVSPFWEEDLGELAQLLGEDHVLFGSDYPHPEGLANPVSYIDELSHLPEELVRKIMGGNLAQLMGIGVPA >Mature_395_residues AHAGISVFDADNHLYETKEALTKYLPARYKGAVDYVELNGRTKIMVRGQVSEYIPNPTFEVVARPGAQEDYYRKGNPEGL SRREIFGKPVKCIDAWREPAARLAKMDEQGLDRTLMFPTLASLIEERMRDDPDLIHAVIHSLNEWLYETWQFNYEGLDRI FTTPVITLPFVDKAIEELEWVLERGAKVVLIRPAPVPGLRGPRSFGLPEFDPFWARVQEAGILVAMHSSDSGYARYTSEW MGATTEMLPFQPNTFRMLQAWRPVEDAVSALVCHGALSRFPGLKIAIVENGMSWVEPLLKSMKNLYKKMPHDFLENPVDV LKRNIYVSPFWEEDLGELAQLLGEDHVLFGSDYPHPEGLANPVSYIDELSHLPEELVRKIMGGNLAQLMGIGVPA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44886; Mature: 44755
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHAGISVFDADNHLYETKEALTKYLPARYKGAVDYVELNGRTKIMVRGQVSEYIPNPTF CCCCCCEEEECCCHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEEEEECCHHHHCCCCCC EVVARPGAQEDYYRKGNPEGLSRREIFGKPVKCIDAWREPAARLAKMDEQGLDRTLMFPT EEEECCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LASLIEERMRDDPDLIHAVIHSLNEWLYETWQFNYEGLDRIFTTPVITLPFVDKAIEELE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEHHHHHHHHHHHH WVLERGAKVVLIRPAPVPGLRGPRSFGLPEFDPFWARVQEAGILVAMHSSDSGYARYTSE HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHH WMGATTEMLPFQPNTFRMLQAWRPVEDAVSALVCHGALSRFPGLKIAIVENGMSWVEPLL HHCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH KSMKNLYKKMPHDFLENPVDVLKRNIYVSPFWEEDLGELAQLLGEDHVLFGSDYPHPEGL HHHHHHHHHCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC ANPVSYIDELSHLPEELVRKIMGGNLAQLMGIGVPA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure AHAGISVFDADNHLYETKEALTKYLPARYKGAVDYVELNGRTKIMVRGQVSEYIPNPTF CCCCCEEEECCCHHHHHHHHHHHHCCHHHCCCEEEEEECCCEEEEEECCHHHHCCCCCC EVVARPGAQEDYYRKGNPEGLSRREIFGKPVKCIDAWREPAARLAKMDEQGLDRTLMFPT EEEECCCCCCCHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LASLIEERMRDDPDLIHAVIHSLNEWLYETWQFNYEGLDRIFTTPVITLPFVDKAIEELE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEHHHHHHHHHHHH WVLERGAKVVLIRPAPVPGLRGPRSFGLPEFDPFWARVQEAGILVAMHSSDSGYARYTSE HHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCCHHHHHH WMGATTEMLPFQPNTFRMLQAWRPVEDAVSALVCHGALSRFPGLKIAIVENGMSWVEPLL HHCCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH KSMKNLYKKMPHDFLENPVDVLKRNIYVSPFWEEDLGELAQLLGEDHVLFGSDYPHPEGL HHHHHHHHHCCHHHHHCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCC ANPVSYIDELSHLPEELVRKIMGGNLAQLMGIGVPA CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA