| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318638
Identifier: 158318638
GI number: 158318638
Start: 8414161
End: 8414460
Strand: Reverse
Name: 158318638
Synonym: Franean1_6906
Alternate gene names: NA
Gene position: 8414460-8414161 (Counterclockwise)
Preceding gene: 158318640
Following gene: 158318634
Centisome position: 93.68
GC content: 71.0
Gene sequence:
>300_bases GTGACCCTGCCTGCTCCGGCTTCCCGCGATGCGGACACGGGCGGCTCCGGTCCCGGCGCGTCAACTGCTCCGGCAGGGGA GCCCGTCCGGACCGGACCGGTCGATCCACCGCGGTACGGCTACGGCTTCCTGGACCGGCGGATCAACGGGACCCGGGTGG TGGGCCACAACGGCGGGACCCCGGGCTATGAGGCTGACCTGGCCATCTACCCGGAAAGCGGGTATGCCGTCGCAATCCTC GCGAATCGGGATCAGGTCCTGCTGCCCGCGGCACAGCGGGCGGAGGAACTGCTGACCTGA
Upstream 100 bases:
>100_bases GGCGCTGGGCCCGATGCCCGGCGGCGGAGCCGCCCGCGGGCGCCGAGTCGCGTGACATCGGGGACCGGGTGCAGGGCGCG AGCCCGGCGGGAAGGTCCAG
Downstream 100 bases:
>100_bases CGGGACCGGAAGGTCTCGCCGGCTCGTCGCGTGACCGGTCGCGACGAACCCGGTGCGGAACCGCCTCGGCGATTCGCGCT CAGACGAGCGCGCCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTLPAPASRDADTGGSGPGASTAPAGEPVRTGPVDPPRYGYGFLDRRINGTRVVGHNGGTPGYEADLAIYPESGYAVAIL ANRDQVLLPAAQRAEELLT
Sequences:
>Translated_99_residues MTLPAPASRDADTGGSGPGASTAPAGEPVRTGPVDPPRYGYGFLDRRINGTRVVGHNGGTPGYEADLAIYPESGYAVAIL ANRDQVLLPAAQRAEELLT >Mature_98_residues TLPAPASRDADTGGSGPGASTAPAGEPVRTGPVDPPRYGYGFLDRRINGTRVVGHNGGTPGYEADLAIYPESGYAVAILA NRDQVLLPAAQRAEELLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10191; Mature: 10060
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPAPASRDADTGGSGPGASTAPAGEPVRTGPVDPPRYGYGFLDRRINGTRVVGHNGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCC PGYEADLAIYPESGYAVAILANRDQVLLPAAQRAEELLT CCCCCEEEEECCCCCEEEEEECCCEEEECCHHHHHHHCC >Mature Secondary Structure TLPAPASRDADTGGSGPGASTAPAGEPVRTGPVDPPRYGYGFLDRRINGTRVVGHNGGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEECCCCC PGYEADLAIYPESGYAVAILANRDQVLLPAAQRAEELLT CCCCCEEEEECCCCCEEEEEECCCEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA