| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318631
Identifier: 158318631
GI number: 158318631
Start: 8404715
End: 8405461
Strand: Reverse
Name: 158318631
Synonym: Franean1_6899
Alternate gene names: NA
Gene position: 8405461-8404715 (Counterclockwise)
Preceding gene: 158318634
Following gene: 158318630
Centisome position: 93.58
GC content: 71.89
Gene sequence:
>747_bases ATGCGTGGACACATCGCGTTATCTACGGCGGATCCATGGGTAGTTCGTCGGCAGGACGCGTGCGGGCAACCCAGAAGTCG CCATCCGTTCAGGCACGCGAGAGTCCCCGATTCTGCCGAGGAGAACCAGAAGATGAACGAGGGCATGAATCCCCCGCGTA CCGATCTGACAGGCCCCCGACCGCCGGTCGTGGCCGCGCCCGAACCGGCCGCCGAGCCGGCCGCCGTTCCTGGTGCCACG AACACCGTTCCTGGTGCCGCGAATACCGTGCCCGCAGCCGGAGCCGCGGTCACCGAGGACACCTCGGTCACCGAGGACAC CGCGGTCACCGAGGACGCGGAGGGCGCCGACATCCGCCGCAAGTTCAACGAGATGACCGCCGGGCTCGCCCCGCATGTGG CCTCCGCCACCGAGAAGACGCGCGACGCGGCCGAGAAGGCGGTGGGCGCGGTCCGTGAGAAGGTCGGCCACAACCCCACG CTCGCCTCCGCGGCGGAGAAGACGGTTGAGGTGAAGGACCGGGCGGTCGGCACCGTAAAGGAGCAGATGGAGCAGCACCC GCAGGTCGCGGCCGCCGCGGAGCGTACGGCGGCCTCCAGCGGGAAGGCGGCACGGACGGCCGGCCAGCAGGCCCGCCGGC ATCCTGGTGCCACCGGGGGCGCGGTCTTCGGCGGCGCCGTGCTGCTCCTGCTCCGGCGGTCGGTGCGCCGCCGCCGGGCC ACGAAGGCGGCGAAGTCCGGCAGCTGA
Upstream 100 bases:
>100_bases CCGTGGGGGGCCTCGGGGGCCTCCCAACGGGGCGGAGCCGGTGGCGCGCAGGACATCCGGCGTCGGCGGCCATCGCGGAC AACGGTGTGTGGTGACGGCG
Downstream 100 bases:
>100_bases GGCGGCTTCGTGCCGAGCCGGTCCGGCGGCGTGGGCGCTGAAAGCACCCGCAAAGCGGTGGATCCGGTGCTCGCCGGACA AAGTGTTTGCGAGTTCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRGHIALSTADPWVVRRQDACGQPRSRHPFRHARVPDSAEENQKMNEGMNPPRTDLTGPRPPVVAAPEPAAEPAAVPGAT NTVPGAANTVPAAGAAVTEDTSVTEDTAVTEDAEGADIRRKFNEMTAGLAPHVASATEKTRDAAEKAVGAVREKVGHNPT LASAAEKTVEVKDRAVGTVKEQMEQHPQVAAAAERTAASSGKAARTAGQQARRHPGATGGAVFGGAVLLLLRRSVRRRRA TKAAKSGS
Sequences:
>Translated_248_residues MRGHIALSTADPWVVRRQDACGQPRSRHPFRHARVPDSAEENQKMNEGMNPPRTDLTGPRPPVVAAPEPAAEPAAVPGAT NTVPGAANTVPAAGAAVTEDTSVTEDTAVTEDAEGADIRRKFNEMTAGLAPHVASATEKTRDAAEKAVGAVREKVGHNPT LASAAEKTVEVKDRAVGTVKEQMEQHPQVAAAAERTAASSGKAARTAGQQARRHPGATGGAVFGGAVLLLLRRSVRRRRA TKAAKSGS >Mature_248_residues MRGHIALSTADPWVVRRQDACGQPRSRHPFRHARVPDSAEENQKMNEGMNPPRTDLTGPRPPVVAAPEPAAEPAAVPGAT NTVPGAANTVPAAGAAVTEDTSVTEDTAVTEDAEGADIRRKFNEMTAGLAPHVASATEKTRDAAEKAVGAVREKVGHNPT LASAAEKTVEVKDRAVGTVKEQMEQHPQVAAAAERTAASSGKAARTAGQQARRHPGATGGAVFGGAVLLLLRRSVRRRRA TKAAKSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25784; Mature: 25784
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGHIALSTADPWVVRRQDACGQPRSRHPFRHARVPDSAEENQKMNEGMNPPRTDLTGPR CCCCEEEECCCCCEEECCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC PPVVAAPEPAAEPAAVPGATNTVPGAANTVPAAGAAVTEDTSVTEDTAVTEDAEGADIRR CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH KFNEMTAGLAPHVASATEKTRDAAEKAVGAVREKVGHNPTLASAAEKTVEVKDRAVGTVK HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EQMEQHPQVAAAAERTAASSGKAARTAGQQARRHPGATGGAVFGGAVLLLLRRSVRRRRA HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TKAAKSGS HHHHCCCC >Mature Secondary Structure MRGHIALSTADPWVVRRQDACGQPRSRHPFRHARVPDSAEENQKMNEGMNPPRTDLTGPR CCCCEEEECCCCCEEECCHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC PPVVAAPEPAAEPAAVPGATNTVPGAANTVPAAGAAVTEDTSVTEDTAVTEDAEGADIRR CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHH KFNEMTAGLAPHVASATEKTRDAAEKAVGAVREKVGHNPTLASAAEKTVEVKDRAVGTVK HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH EQMEQHPQVAAAAERTAASSGKAARTAGQQARRHPGATGGAVFGGAVLLLLRRSVRRRRA HHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH TKAAKSGS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA