| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318630
Identifier: 158318630
GI number: 158318630
Start: 8404263
End: 8404568
Strand: Reverse
Name: 158318630
Synonym: Franean1_6898
Alternate gene names: NA
Gene position: 8404568-8404263 (Counterclockwise)
Preceding gene: 158318631
Following gene: 158318628
Centisome position: 93.57
GC content: 64.71
Gene sequence:
>306_bases ATGCTGACTTTCCTCGTCGTCATGGTCCTGCTCGGTCTGATCGCCGGCGCGGTCGCGCGTCTGGTTCTTCCTGGCCCGGA CCCGATCGGAATTCTCGGCACGATCGCCGTAGGTATCGTCGGGTCTTTCGTCGGGGGTTTCCTCGGCTACGTCCTGTTCA ACAAGGACATTGGTGAGGGCGCGCTCCAGCCGTCCGGCATCATCGGTTCCATCATCGGCGCGATCATCGTGCTGGCGCTG TGGAGGGCCTTCAACGGCCGTGGCCTCTCCCGCACCTCGCACAGCCGTCGGTACGCCCGCCGGTAA
Upstream 100 bases:
>100_bases CCCGCAAAGCGGTGGATCCGGTGCTCGCCGGACAAAGTGTTTGCGAGTTCCGGTGCGGGGCAAAAAGCTGCCAACAACCT CGGTAAAGGAGAAACCACTG
Downstream 100 bases:
>100_bases GTAACGGCGAGCCGGCGACTGACAGCGGTTTGGCGCCTGACGACGGAAAAGGGCCGCTGCCCCGAGATCTCGGGGCAGCG GCCCTTTCGATGTCCGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MLTFLVVMVLLGLIAGAVARLVLPGPDPIGILGTIAVGIVGSFVGGFLGYVLFNKDIGEGALQPSGIIGSIIGAIIVLAL WRAFNGRGLSRTSHSRRYARR
Sequences:
>Translated_101_residues MLTFLVVMVLLGLIAGAVARLVLPGPDPIGILGTIAVGIVGSFVGGFLGYVLFNKDIGEGALQPSGIIGSIIGAIIVLAL WRAFNGRGLSRTSHSRRYARR >Mature_101_residues MLTFLVVMVLLGLIAGAVARLVLPGPDPIGILGTIAVGIVGSFVGGFLGYVLFNKDIGEGALQPSGIIGSIIGAIIVLAL WRAFNGRGLSRTSHSRRYARR
Specific function: Unknown
COG id: COG2261
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10517; Mature: 10517
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFLVVMVLLGLIAGAVARLVLPGPDPIGILGTIAVGIVGSFVGGFLGYVLFNKDIGEG CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ALQPSGIIGSIIGAIIVLALWRAFNGRGLSRTSHSRRYARR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC >Mature Secondary Structure MLTFLVVMVLLGLIAGAVARLVLPGPDPIGILGTIAVGIVGSFVGGFLGYVLFNKDIGEG CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ALQPSGIIGSIIGAIIVLALWRAFNGRGLSRTSHSRRYARR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA