| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318617
Identifier: 158318617
GI number: 158318617
Start: 8389736
End: 8390344
Strand: Direct
Name: 158318617
Synonym: Franean1_6885
Alternate gene names: NA
Gene position: 8389736-8390344 (Clockwise)
Preceding gene: 158318616
Following gene: 158318618
Centisome position: 93.41
GC content: 77.18
Gene sequence:
>609_bases ATGGACCTGAGCACCATCCGGGTGACCACGGCCACGGGAACGGTCGAGCTGACCCCGGACCGGTCCTACGTGATCGGCCG CAGCCGCGAGGCGGACATCACCGTCCAGGACACGAAGGTCTCCCGCCGGCACGTCGAGCTCGCCCCGGGCCCGGACGGCT GGACGGCGCGTGACCTGAGCACCAACGGCGTCTGGAGCGAGGGGGCGCGGGCGAAGCAGTTCGCCGTCGACGGCGAGATC CGCATCCGGCTGGGCGGGCTGAGTGGTCCGGAGGTCCTGCTCCGGGCGTTCCGGCCGGTCCAGCGCCCGCCGGCCGCGGC GCCGCGGCCGAAGCTCGACAACGCCGATGCCGAGACCATGCTGGCCGGGCAGGGCCGCCGGCCGGTCCCCGGGCAGGCCG CCCCGCCCGTCCCGGCCGCTCGGACGCCTGAACCAGCGGGTGCCGGGGCCGGTTCCGCCGGGGCCAGCGCTGGCGCTGGT GGCGGGGCTGGAGCTGGTGGCGGGGCCGCGCCGAGGCCCGCCCTGGGCGGTTGGCTGCGCGCGCTGCCGACCCTGGTCTG GCTCGCCGCCGTGGGATTCGCCCTCGGCGCCCTGGTCGCACTCTCCTGA
Upstream 100 bases:
>100_bases ACCGGTGCTCCCGTCGCCGGGCCGGCCGGCGAGCCGCTCGCGCCGATCCCGGTGACCGTGCGCGACGACGCCGTCTTCCG CGGCTGAGAAGGGGGAGAAC
Downstream 100 bases:
>100_bases CACCCGGCCGTCCTGCCGCGCCGGCGGCACCGTGCCGGCACGGCAGGATGGGAGCCGTGGTCACCGTCAGCCCGGAGCGG TTCGAGGAACTGGTCGTCGC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: Forkhead-Associated Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDLSTIRVTTATGTVELTPDRSYVIGRSREADITVQDTKVSRRHVELAPGPDGWTARDLSTNGVWSEGARAKQFAVDGEI RIRLGGLSGPEVLLRAFRPVQRPPAAAPRPKLDNADAETMLAGQGRRPVPGQAAPPVPAARTPEPAGAGAGSAGASAGAG GGAGAGGGAAPRPALGGWLRALPTLVWLAAVGFALGALVALS
Sequences:
>Translated_202_residues MDLSTIRVTTATGTVELTPDRSYVIGRSREADITVQDTKVSRRHVELAPGPDGWTARDLSTNGVWSEGARAKQFAVDGEI RIRLGGLSGPEVLLRAFRPVQRPPAAAPRPKLDNADAETMLAGQGRRPVPGQAAPPVPAARTPEPAGAGAGSAGASAGAG GGAGAGGGAAPRPALGGWLRALPTLVWLAAVGFALGALVALS >Mature_202_residues MDLSTIRVTTATGTVELTPDRSYVIGRSREADITVQDTKVSRRHVELAPGPDGWTARDLSTNGVWSEGARAKQFAVDGEI RIRLGGLSGPEVLLRAFRPVQRPPAAAPRPKLDNADAETMLAGQGRRPVPGQAAPPVPAARTPEPAGAGAGSAGASAGAG GGAGAGGGAAPRPALGGWLRALPTLVWLAAVGFALGALVALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20390; Mature: 20390
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLSTIRVTTATGTVELTPDRSYVIGRSREADITVQDTKVSRRHVELAPGPDGWTARDLS CCCCEEEEEECCCEEEECCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCCEECCCC TNGVWSEGARAKQFAVDGEIRIRLGGLSGPEVLLRAFRPVQRPPAAAPRPKLDNADAETM CCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHE LAGQGRRPVPGQAAPPVPAARTPEPAGAGAGSAGASAGAGGGAGAGGGAAPRPALGGWLR EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALPTLVWLAAVGFALGALVALS HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDLSTIRVTTATGTVELTPDRSYVIGRSREADITVQDTKVSRRHVELAPGPDGWTARDLS CCCCEEEEEECCCEEEECCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCCEECCCC TNGVWSEGARAKQFAVDGEIRIRLGGLSGPEVLLRAFRPVQRPPAAAPRPKLDNADAETM CCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHE LAGQGRRPVPGQAAPPVPAARTPEPAGAGAGSAGASAGAGGGAGAGGGAAPRPALGGWLR EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH ALPTLVWLAAVGFALGALVALS HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA