Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158318615

Identifier: 158318615

GI number: 158318615

Start: 8388659

End: 8389255

Strand: Direct

Name: 158318615

Synonym: Franean1_6883

Alternate gene names: NA

Gene position: 8388659-8389255 (Clockwise)

Preceding gene: 158318614

Following gene: 158318616

Centisome position: 93.39

GC content: 67.17

Gene sequence:

>597_bases
ATGGCACTGGGTACAGAAAGTTCCGGTTCGAATACGGCTCCGGATAGCACACGCGCGCCTTCGGCGGGGCTCGGTATCGC
CGTCGCGTTGTTGACCGGAGTGGCGGTCACACTGGCGCTGGCGGTCTACTCGAAGACCCACGACCCCGCCCGTCGGCCGC
TGTTCACCCTGGGTTTCTCCGGCATGCTGCCGATGAAGGCCTGGCTCACCACGGCCGCGGCCATCCTCCTGTTCGTCCAG
CTCACGACCGCCCTGTGGATGTGGGGGCGGCTGCCCGGAGCCGGCCGGGCACCCGGCTGGACGGCGCCCGTACACCGCTG
GAGCGGCACGGTCGCGTTCGTGCTGACGCTGCCCGTCGCGTTCCACTGCATCTGGGCCCTCGGATTCGCCAGCAGCGATT
CTCGCGTGCTCGTGCACAGCCTCGCGGGATGTGTCTTCTACGGCGCCTACGCGGCGAAAATGCTCGGCCTGCGGACGCGA
AAACTCCCGGGATGGGCACTGCCGGTACTGGGATCGGCGGTTCTCCTCTCCCTCGTCGTGCTCTGGCTGAGCGCGTCGCT
GTGGTTTTTCACCCGTACCGACATCCCGAAATTCTGA

Upstream 100 bases:

>100_bases
CGTTCCGTCGGCGGGCTGTCAGCCGAGCGACGAAGCTAGACCGCACCCCCCTTTTTGCTGCATAGTGCGCCGAGCGGGAA
TGTTGGCGAACGGGGGGCGG

Downstream 100 bases:

>100_bases
GGAAGGCCGGCATGACGCAGGAAGCTCCGACCCGGCGCGTGGTCGTACCCGGCCTCATCGTGACCGCGGCGGGTGCCGCC
GCCGGCTATGTGGTGGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQ
LTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTR
KLPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF

Sequences:

>Translated_198_residues
MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQ
LTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTR
KLPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF
>Mature_197_residues
ALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFSGMLPMKAWLTTAAAILLFVQL
TTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVAFHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRK
LPGWALPVLGSAVLLSLVVLWLSASLWFFTRTDIPKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21013; Mature: 20882

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
GMLPMKAWLTTAAAILLFVQLTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
FHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRKLPGWALPVLGSAVLLSLVV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LWLSASLWFFTRTDIPKF
HHHHHHHHEEECCCCCCC
>Mature Secondary Structure 
ALGTESSGSNTAPDSTRAPSAGLGIAVALLTGVAVTLALAVYSKTHDPARRPLFTLGFS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCC
GMLPMKAWLTTAAAILLFVQLTTALWMWGRLPGAGRAPGWTAPVHRWSGTVAFVLTLPVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHH
FHCIWALGFASSDSRVLVHSLAGCVFYGAYAAKMLGLRTRKLPGWALPVLGSAVLLSLVV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LWLSASLWFFTRTDIPKF
HHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA