| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318568
Identifier: 158318568
GI number: 158318568
Start: 8332066
End: 8333265
Strand: Direct
Name: 158318568
Synonym: Franean1_6836
Alternate gene names: NA
Gene position: 8332066-8333265 (Clockwise)
Preceding gene: 158318567
Following gene: 158318572
Centisome position: 92.76
GC content: 69.92
Gene sequence:
>1200_bases GTGGACTACCAGCTGATCGATGCCGATGGCCACTACTACGAGCCCGACGACTGCTTCTCCCGGCATATCGAGGCCGGTTT CAAGGAGCACACCGTACGGGTCGAGCGCGGGGCCGACGGCCTGGGCCGGGTCTATCTGGGCGACCGCCGCACATTCATGA GCGTGATGCCCGGGGACTACGCGTCCGCCCCCGGCGCGCTGCAGGGGCTGTTCGTCGGCGAGGTGGCGGACGGCTTCACC CACCGCGAGGTCCTGAACGCGAAGGACCACCCCGCGTTCATCGAACGGCCCGCGCGGCTGGACCTGATGGACGACCAGGG TGTCGAGGCGACCATCATGCTGCCCACCCTCGGCGTGGCCGTCGAGCAGGACATGGCGGACGACGTCGAGCTGACCTACG CCAGCCTGCGCGCGTTCAACCGGTGGCTCGAGGAGGACTGGGGCTACGCCGAGCAGGACCGGATCTTCGCCGTTCCGATG CTCTCCCTGCTCGACATCGACCACGCCGTGGCCGAGCTGAAGCGGGTGCTGGACGCCGACGCGCGCCTGGTGCACCTGCG CCCCGGGCCGATCGGCGGCCGCTCCCCCGCGCACCCCGACTTCGACCGGTTCTGGGCGATGGCGGCCGAGGCCGGGGTCG GGGTCGTGTTCCACGTCTCCAACAGCGGTTACAACGCGGCGTACGGCCAGCTCTGGTCCGAGGACGCGGGCAACCCGTCG CACCTGCAGTCGCCGCTGCAGTGGGCGCTGTGCAACACCGAGCGGCCGATCGTCGACACGCTCAGCGCGCTCGCCCTGCA CAACCTCTTCGGCCGACACCCCAACATCAAGATCATCTCGATCGAGAACGGCAGCAACTGGGTGCGACCGCTGCTGAAGA CGGTCGACAAGGCCGCCGCGCTCGGCCGGCGCGGCCCGATGATCGGCGGCACGCTCTCGGCGAAGCCCAGCGAGATGCTC GCCGAGCACCTGTGGGTCTGCCCGTTCCCCGAGGACGACGTGCACGACCTCATCAGCGTGCTCGGCCCGGACCAGGTCCT CTTCGGTTCGGACTACCCGCACCCCGAGGGGCTCCGCCAGCCCATGGACTACGTCGAGCGCCTCGACGACTGCGACCCGG TCACGCGGCGCAAGGTGCTGCGCAGCAACACCGCCGACCTGCTCCGGATCCCCGACAAGGAGACCGCCAAGTCCGCGTAG
Upstream 100 bases:
>100_bases ACCCGCACCTCGTGGCCCGCCAGTGCACCGCGCGCAAGTCCCGGCACTTCGACCGGCGCAGCGAGTATTCACTGAATCGT TTTCCCGGAGGTGGCACGCG
Downstream 100 bases:
>100_bases GACACCAACCCCGGCCCCCGAGCCGGGCCCGGCTCGGCCCTGAGCGGCAGAGACAGAGAGCCCACGGACGCGGAAGCGCC CGGGTGGCCACCGCGGAATG
Product: amidohydrolase 2
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MDYQLIDADGHYYEPDDCFSRHIEAGFKEHTVRVERGADGLGRVYLGDRRTFMSVMPGDYASAPGALQGLFVGEVADGFT HREVLNAKDHPAFIERPARLDLMDDQGVEATIMLPTLGVAVEQDMADDVELTYASLRAFNRWLEEDWGYAEQDRIFAVPM LSLLDIDHAVAELKRVLDADARLVHLRPGPIGGRSPAHPDFDRFWAMAAEAGVGVVFHVSNSGYNAAYGQLWSEDAGNPS HLQSPLQWALCNTERPIVDTLSALALHNLFGRHPNIKIISIENGSNWVRPLLKTVDKAAALGRRGPMIGGTLSAKPSEML AEHLWVCPFPEDDVHDLISVLGPDQVLFGSDYPHPEGLRQPMDYVERLDDCDPVTRRKVLRSNTADLLRIPDKETAKSA
Sequences:
>Translated_399_residues MDYQLIDADGHYYEPDDCFSRHIEAGFKEHTVRVERGADGLGRVYLGDRRTFMSVMPGDYASAPGALQGLFVGEVADGFT HREVLNAKDHPAFIERPARLDLMDDQGVEATIMLPTLGVAVEQDMADDVELTYASLRAFNRWLEEDWGYAEQDRIFAVPM LSLLDIDHAVAELKRVLDADARLVHLRPGPIGGRSPAHPDFDRFWAMAAEAGVGVVFHVSNSGYNAAYGQLWSEDAGNPS HLQSPLQWALCNTERPIVDTLSALALHNLFGRHPNIKIISIENGSNWVRPLLKTVDKAAALGRRGPMIGGTLSAKPSEML AEHLWVCPFPEDDVHDLISVLGPDQVLFGSDYPHPEGLRQPMDYVERLDDCDPVTRRKVLRSNTADLLRIPDKETAKSA >Mature_399_residues MDYQLIDADGHYYEPDDCFSRHIEAGFKEHTVRVERGADGLGRVYLGDRRTFMSVMPGDYASAPGALQGLFVGEVADGFT HREVLNAKDHPAFIERPARLDLMDDQGVEATIMLPTLGVAVEQDMADDVELTYASLRAFNRWLEEDWGYAEQDRIFAVPM LSLLDIDHAVAELKRVLDADARLVHLRPGPIGGRSPAHPDFDRFWAMAAEAGVGVVFHVSNSGYNAAYGQLWSEDAGNPS HLQSPLQWALCNTERPIVDTLSALALHNLFGRHPNIKIISIENGSNWVRPLLKTVDKAAALGRRGPMIGGTLSAKPSEML AEHLWVCPFPEDDVHDLISVLGPDQVLFGSDYPHPEGLRQPMDYVERLDDCDPVTRRKVLRSNTADLLRIPDKETAKSA
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44271; Mature: 44271
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYQLIDADGHYYEPDDCFSRHIEAGFKEHTVRVERGADGLGRVYLGDRRTFMSVMPGDY CCCEEECCCCCEECCHHHHHHHHHCCHHHHEEEEECCCCCCCEEEECCCHHHHHHCCCCC ASAPGALQGLFVGEVADGFTHREVLNAKDHPAFIERPARLDLMDDQGVEATIMLPTLGVA CCCCCHHHHEEHHHHHCCHHHHHHHCCCCCCHHHCCCCCEEEECCCCCEEEEEECCCCHH VEQDMADDVELTYASLRAFNRWLEEDWGYAEQDRIFAVPMLSLLDIDHAVAELKRVLDAD HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC ARLVHLRPGPIGGRSPAHPDFDRFWAMAAEAGVGVVFHVSNSGYNAAYGQLWSEDAGNPS CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCHH HLQSPLQWALCNTERPIVDTLSALALHNLFGRHPNIKIISIENGSNWVRPLLKTVDKAAA HHHCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LGRRGPMIGGTLSAKPSEMLAEHLWVCPFPEDDVHDLISVLGPDQVLFGSDYPHPEGLRQ HCCCCCCCCCCCCCCHHHHHHHHCEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHH PMDYVERLDDCDPVTRRKVLRSNTADLLRIPDKETAKSA HHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHCCCC >Mature Secondary Structure MDYQLIDADGHYYEPDDCFSRHIEAGFKEHTVRVERGADGLGRVYLGDRRTFMSVMPGDY CCCEEECCCCCEECCHHHHHHHHHCCHHHHEEEEECCCCCCCEEEECCCHHHHHHCCCCC ASAPGALQGLFVGEVADGFTHREVLNAKDHPAFIERPARLDLMDDQGVEATIMLPTLGVA CCCCCHHHHEEHHHHHCCHHHHHHHCCCCCCHHHCCCCCEEEECCCCCEEEEEECCCCHH VEQDMADDVELTYASLRAFNRWLEEDWGYAEQDRIFAVPMLSLLDIDHAVAELKRVLDAD HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCC ARLVHLRPGPIGGRSPAHPDFDRFWAMAAEAGVGVVFHVSNSGYNAAYGQLWSEDAGNPS CEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCCCHH HLQSPLQWALCNTERPIVDTLSALALHNLFGRHPNIKIISIENGSNWVRPLLKTVDKAAA HHHCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHH LGRRGPMIGGTLSAKPSEMLAEHLWVCPFPEDDVHDLISVLGPDQVLFGSDYPHPEGLRQ HCCCCCCCCCCCCCCHHHHHHHHCEECCCCCCHHHHHHHHHCCCCEEECCCCCCHHHHHH PMDYVERLDDCDPVTRRKVLRSNTADLLRIPDKETAKSA HHHHHHHHCCCCHHHHHHHHHCCCCCEEECCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA