Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318565

Identifier: 158318565

GI number: 158318565

Start: 8327623

End: 8327988

Strand: Reverse

Name: 158318565

Synonym: Franean1_6833

Alternate gene names: NA

Gene position: 8327988-8327623 (Counterclockwise)

Preceding gene: 158318569

Following gene: 158318564

Centisome position: 92.72

GC content: 73.77

Gene sequence:

>366_bases
TTGCTCGTCGAACACTGCCCGGCCTGCGGGTCCGACTCCTTCCCGCCGTACGGGGCCTGCCGGGTGTGCCGGAGCCGTCC
GGTCGAGTTCGTGGAGATCACCGAGCGCGGCCGGGTGTACAGCTTCACGGTCAACCACCAGCGCTGGATGCCCGGTCTCG
AGGTGCCCTACGCGATCGTCCTCGTCGAGTTCCCGGGCCATCCGGGCGTGCGGGTGGCCGGCCGGCTGCGCGGCTGCCCC
CCGGAGGCCGTGGAGATCGGGATGGCGGTCGAGGTCGGCTTCGAGCCGGGGCCCGGCGACTTCGCCGTCCCGAGCTTCGT
CGCCGTCGACCGCGCCTCCGAGAGCGGTGCCGGGGCGACCGCGTGA

Upstream 100 bases:

>100_bases
TAGGGAAGCAAGGGGGAGAGGCTTGACCGCGATCGTGGGTATACCCCCGGCCGTGACCGAGGAGACCGAGCCGTTCTGGA
CGGCGGCTCGCGAAGGCCGG

Downstream 100 bases:

>100_bases
CGGGCACCGAGCACTTCGAGAAGCGGGTCGTGCTCTCCGGCGTCGGCCAGTCGGCCGTCGGGCGGCGCATCGACCGCTCC
GGGTTCCAGCTGACCCTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP
PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA

Sequences:

>Translated_121_residues
MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP
PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA
>Mature_121_residues
MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIVLVEFPGHPGVRVAGRLRGCP
PEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGATA

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12919; Mature: 12919

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIV
CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE
LVEFPGHPGVRVAGRLRGCPPEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGAT
EEECCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
A
C
>Mature Secondary Structure
MLVEHCPACGSDSFPPYGACRVCRSRPVEFVEITERGRVYSFTVNHQRWMPGLEVPYAIV
CCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEE
LVEFPGHPGVRVAGRLRGCPPEAVEIGMAVEVGFEPGPGDFAVPSFVAVDRASESGAGAT
EEECCCCCCEEEEEECCCCCHHHEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA