| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318518
Identifier: 158318518
GI number: 158318518
Start: 8268879
End: 8269772
Strand: Direct
Name: 158318518
Synonym: Franean1_6786
Alternate gene names: NA
Gene position: 8268879-8269772 (Clockwise)
Preceding gene: 158318517
Following gene: 158318519
Centisome position: 92.06
GC content: 74.5
Gene sequence:
>894_bases GTGGGCCTGGTGACCCGGAAGGCCCGAACGGCTGTCGCTCCACCTGGCATGCGCCGTGCCCCAACCCCCGTCCCCGGGGC ACGGCGCCCAGAGCGAACGCGGCGAACGGCGGAGCCGACGCGGACCGCCGCGCACGCCCTGCGGGAGACGACGGTGATCG CCTCCGACGGGGTGTCCCTGCATGTCGACGAGATCGGCCCGAGCGACGCGACGCTGACCCTCGTCTTCGTGCACGGCTTC TGCATGACCGCGGACGCCTGGTCCTCCCAGCGCCGGAATCTCGCCGACCTGGGACGCACGGTCTGCTACGACCAACGCGC GCACGGCCGGTCGGGCCCGTCCGACGCCGAGCACTGCACCCTCGCGCAGCTCGCCGATGACCTGCTCCGGGTCCTCGACG ACCGGGTGCCGACCGGCCCGATCGCGCTCATCGGTCATTCGATGGGCGGGATGACCATCCTCGGGCTGGCCGAGACACAC CCGGAGCTGTTCGGCGACCGGATCGTCGCCGTGGCCCTGCTGTCCACGAGCGCGGGTGGGCTGGCCCGGTCGGTACTCGG CCTCGGCCTGCCGGCCATGGTCGCCACCGCGGCACGCCGGACGCTGCCCGGTGTGGCCGCCGCGATGCGCCACTCCCCGT CGGTGCTGGAACGGGCCCGGTGGCGGGGCAGCGGCCTGTCGAGGGCGCTGGTCGAGGCCGTGCCGGCCGCCGAACTCTCC GTCGAGGCAGGTGCCGGGCACGCGGTGATCCTCGAACGCCCGAACGCGGTCAGTGCCCGCCTACGCGAGCTGATCGACAG GGCGCTTCCGGGCCGCCGGGTGTGCCGGCGCCCAAGCCTGCGTCCGATGACGCGGACCCGGCGCATCCCCACCGCCGGCG ATCGACAGCCCTGA
Upstream 100 bases:
>100_bases GGCCGAAGCTCTCCCGCCGGCGCCACCGCCGCTGGCTGCACTGATACACCACCCCAGAACGGGGCACAGGTGTTTTTATC GCACTGATGGAGGTGGGGAC
Downstream 100 bases:
>100_bases GACCCGAAGAAAGGAAGGACGGTACGGCTGTTGGGCGCGCAGGCGCACATCGGTACGTCCGGCTGGAGCTACGACCACTG GACCGGCGTGCTGTACCCGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Lipase; Alpha/Beta Hydrolase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Hydrolase Alpha/Beta Fold Family Protein; 3-Oxoadipate Enol-Lactonase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold Containing Protein; Alpha/Beta Family Hydrolase; Non-Heme Haloperoxidase Hpx
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGLVTRKARTAVAPPGMRRAPTPVPGARRPERTRRTAEPTRTAAHALRETTVIASDGVSLHVDEIGPSDATLTLVFVHGF CMTADAWSSQRRNLADLGRTVCYDQRAHGRSGPSDAEHCTLAQLADDLLRVLDDRVPTGPIALIGHSMGGMTILGLAETH PELFGDRIVAVALLSTSAGGLARSVLGLGLPAMVATAARRTLPGVAAAMRHSPSVLERARWRGSGLSRALVEAVPAAELS VEAGAGHAVILERPNAVSARLRELIDRALPGRRVCRRPSLRPMTRTRRIPTAGDRQP
Sequences:
>Translated_297_residues MGLVTRKARTAVAPPGMRRAPTPVPGARRPERTRRTAEPTRTAAHALRETTVIASDGVSLHVDEIGPSDATLTLVFVHGF CMTADAWSSQRRNLADLGRTVCYDQRAHGRSGPSDAEHCTLAQLADDLLRVLDDRVPTGPIALIGHSMGGMTILGLAETH PELFGDRIVAVALLSTSAGGLARSVLGLGLPAMVATAARRTLPGVAAAMRHSPSVLERARWRGSGLSRALVEAVPAAELS VEAGAGHAVILERPNAVSARLRELIDRALPGRRVCRRPSLRPMTRTRRIPTAGDRQP >Mature_296_residues GLVTRKARTAVAPPGMRRAPTPVPGARRPERTRRTAEPTRTAAHALRETTVIASDGVSLHVDEIGPSDATLTLVFVHGFC MTADAWSSQRRNLADLGRTVCYDQRAHGRSGPSDAEHCTLAQLADDLLRVLDDRVPTGPIALIGHSMGGMTILGLAETHP ELFGDRIVAVALLSTSAGGLARSVLGLGLPAMVATAARRTLPGVAAAMRHSPSVLERARWRGSGLSRALVEAVPAAELSV EAGAGHAVILERPNAVSARLRELIDRALPGRRVCRRPSLRPMTRTRRIPTAGDRQP
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31587; Mature: 31456
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLVTRKARTAVAPPGMRRAPTPVPGARRPERTRRTAEPTRTAAHALRETTVIASDGVSL CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCEE HVDEIGPSDATLTLVFVHGFCMTADAWSSQRRNLADLGRTVCYDQRAHGRSGPSDAEHCT EECCCCCCCCEEEEEEEHHHHHCCHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCHHHHH LAQLADDLLRVLDDRVPTGPIALIGHSMGGMTILGLAETHPELFGDRIVAVALLSTSAGG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEHHHCHHHHHHHHHHHHHHHCCCCH LARSVLGLGLPAMVATAARRTLPGVAAAMRHSPSVLERARWRGSGLSRALVEAVPAAELS HHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCHHHEE VEAGAGHAVILERPNAVSARLRELIDRALPGRRVCRRPSLRPMTRTRRIPTAGDRQP EECCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure GLVTRKARTAVAPPGMRRAPTPVPGARRPERTRRTAEPTRTAAHALRETTVIASDGVSL CCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHEEECCCCEE HVDEIGPSDATLTLVFVHGFCMTADAWSSQRRNLADLGRTVCYDQRAHGRSGPSDAEHCT EECCCCCCCCEEEEEEEHHHHHCCHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCHHHHH LAQLADDLLRVLDDRVPTGPIALIGHSMGGMTILGLAETHPELFGDRIVAVALLSTSAGG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEHHHCHHHHHHHHHHHHHHHCCCCH LARSVLGLGLPAMVATAARRTLPGVAAAMRHSPSVLERARWRGSGLSRALVEAVPAAELS HHHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHCCHHHEE VEAGAGHAVILERPNAVSARLRELIDRALPGRRVCRRPSLRPMTRTRRIPTAGDRQP EECCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA