Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318507

Identifier: 158318507

GI number: 158318507

Start: 8246955

End: 8247359

Strand: Reverse

Name: 158318507

Synonym: Franean1_6775

Alternate gene names: NA

Gene position: 8247359-8246955 (Counterclockwise)

Preceding gene: 158318509

Following gene: 158318503

Centisome position: 91.82

GC content: 64.44

Gene sequence:

>405_bases
ATGTGCCGAACTACAAGTTGGCGCGACGGGGGTCCGCCTCTTTCGTTGCCAGCGCCGTGTCCCTCCCCGCCCTCGATGCG
TGAGGCGTACGCCAACACCGGGAGCGAGGTCCGACGGGCCTCGGGGGTGGCCGGCTCACTCGGTGACGTTGAGCTACGCC
GGGTGAGCCAGCCGAGCGAGCGGAGGAGAAGCCCGATGCCGGGCTACATACGGCTTGCCGTCAACATCAACACGGAGAGC
GCGGCGGCGTTGAAGGAGATCACTCAACGGCGTACCGCGTCTTACACGGAGACGCTCCGCAGAGCCGTCTCACTTCTCAA
GCTGATCGAGGACGAGACCCAGAAGGGTCACAATGTCCAAGTCAATGAGGGCAAGCGCGTTCGCAACATCGTGCTCTCGC
CGTGA

Upstream 100 bases:

>100_bases
GGCACCATGACAGGCTAGGAGTGCTCGACGTGCAGGTCGAGAGTGCCAACTGGCGCGCTCGACGCCGTCTGGCGCGTGGT
CGGCTACTTAAGGTTGCGCG

Downstream 100 bases:

>100_bases
ACTCTGGTGTCGCCGTGGGGCAGTCGGGTCGAGGCAGCTCCAGGTGGCGCGGCGCACGTGGTCTGGCGCCAGGGCCTGAT
CTCCCTCCGAGGCGTCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES
AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP

Sequences:

>Translated_134_residues
MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES
AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP
>Mature_134_residues
MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSERRRSPMPGYIRLAVNINTES
AAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQVNEGKRVRNIVLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14727; Mature: 14727

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCHH
RRRSPMPGYIRLAVNINTESAAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQ
HHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNEGKRVRNIVLSP
ECCCCCCHHCCCCC
>Mature Secondary Structure
MCRTTSWRDGGPPLSLPAPCPSPPSMREAYANTGSEVRRASGVAGSLGDVELRRVSQPSE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHCCCCHH
RRRSPMPGYIRLAVNINTESAAALKEITQRRTASYTETLRRAVSLLKLIEDETQKGHNVQ
HHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
VNEGKRVRNIVLSP
ECCCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA