| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158318506
Identifier: 158318506
GI number: 158318506
Start: 8245299
End: 8245997
Strand: Direct
Name: 158318506
Synonym: Franean1_6774
Alternate gene names: NA
Gene position: 8245299-8245997 (Clockwise)
Preceding gene: 158318505
Following gene: 158318508
Centisome position: 91.8
GC content: 56.22
Gene sequence:
>699_bases TTGCGGCTATATCCTGACCCGTCATCGGGGGTCCGCAGCCAGCGAAGTACAAGCGCCGGCTGCGGCGTTGGACGGCACCG GGGGGTAGCCATGTCTATGGACGACGACGCTGGTCCAAGCCAAAGGATGGTTGCACGGCTTTATGATCTACTCGGCTGGG AAGTAGTCGCGGACTACAAGGCGAGCTGCTTGCTTGCTTTCACAGGCGACAAATCCGAGGTTCTCAATATGACTCATATA AATCTTGGCGCAGCGCTAACGGGACCCGGCGTACCCGTTATTCTTTTCGAGCCAAGTGTGGAAATTCGGGCATCCAGGCC TGACTCAAGCTCACGCGAAGTACTCACGGAGCTGATCATTAAAGAAGGGTTTTCCCGGCTGTCACCTCAGTCGCACATCG AATCACTGAACGGATGGCATGTAGCGCTAAAGGATGGACGCTTTACACTTTACAACGGCGCGAATATGTGGGTTTCGGGG GTGACGGTGGAAAATCCTCTCTGGAGCGCAGCAGCGCAGACGATGAAAAAGGTGCTGGTTATCTACGGCACAGAACTAGG TATTGCCCGCCCCCCGGACAAGCCCGGTCCGTATCGACTCGGGGAGCGAAAAGCGGAGTTCGACCGTTCGAGGGCTGAAG GGCGGATTGCAGCGGCGTTCGTAACATGGCGTGACGCGGAAAAGTCAACGAAAACCTAA
Upstream 100 bases:
>100_bases CCGATCGGCGGCTACGTGAAGGCGGACATCACCGGAGCAACAGCGCCGCCCGACCCTCTACATCGGCACTTCGATCCTCA AAACGCGCACATTTGGTCGT
Downstream 100 bases:
>100_bases GCAACGAGGACGATGTCGCGTATGCGCTTACCCTCGTTGATCTGGATCGTGTGCCCCTTTTGAGTTTCATCCTCAATGAG CTTTAGGATAGCGATCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MRLYPDPSSGVRSQRSTSAGCGVGRHRGVAMSMDDDAGPSQRMVARLYDLLGWEVVADYKASCLLAFTGDKSEVLNMTHI NLGAALTGPGVPVILFEPSVEIRASRPDSSSREVLTELIIKEGFSRLSPQSHIESLNGWHVALKDGRFTLYNGANMWVSG VTVENPLWSAAAQTMKKVLVIYGTELGIARPPDKPGPYRLGERKAEFDRSRAEGRIAAAFVTWRDAEKSTKT
Sequences:
>Translated_232_residues MRLYPDPSSGVRSQRSTSAGCGVGRHRGVAMSMDDDAGPSQRMVARLYDLLGWEVVADYKASCLLAFTGDKSEVLNMTHI NLGAALTGPGVPVILFEPSVEIRASRPDSSSREVLTELIIKEGFSRLSPQSHIESLNGWHVALKDGRFTLYNGANMWVSG VTVENPLWSAAAQTMKKVLVIYGTELGIARPPDKPGPYRLGERKAEFDRSRAEGRIAAAFVTWRDAEKSTKT >Mature_232_residues MRLYPDPSSGVRSQRSTSAGCGVGRHRGVAMSMDDDAGPSQRMVARLYDLLGWEVVADYKASCLLAFTGDKSEVLNMTHI NLGAALTGPGVPVILFEPSVEIRASRPDSSSREVLTELIIKEGFSRLSPQSHIESLNGWHVALKDGRFTLYNGANMWVSG VTVENPLWSAAAQTMKKVLVIYGTELGIARPPDKPGPYRLGERKAEFDRSRAEGRIAAAFVTWRDAEKSTKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25339; Mature: 25339
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYPDPSSGVRSQRSTSAGCGVGRHRGVAMSMDDDAGPSQRMVARLYDLLGWEVVADYK CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHEECCC ASCLLAFTGDKSEVLNMTHINLGAALTGPGVPVILFEPSVEIRASRPDSSSREVLTELII CEEEEEEECCHHHEEEEEEEEECEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHH KEGFSRLSPQSHIESLNGWHVALKDGRFTLYNGANMWVSGVTVENPLWSAAAQTMKKVLV HHHHHHCCCHHHHHHCCCEEEEEECCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHEEE IYGTELGIARPPDKPGPYRLGERKAEFDRSRAEGRIAAAFVTWRDAEKSTKT EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCC >Mature Secondary Structure MRLYPDPSSGVRSQRSTSAGCGVGRHRGVAMSMDDDAGPSQRMVARLYDLLGWEVVADYK CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCHHHEECCC ASCLLAFTGDKSEVLNMTHINLGAALTGPGVPVILFEPSVEIRASRPDSSSREVLTELII CEEEEEEECCHHHEEEEEEEEECEEECCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHH KEGFSRLSPQSHIESLNGWHVALKDGRFTLYNGANMWVSGVTVENPLWSAAAQTMKKVLV HHHHHHCCCHHHHHHCCCEEEEEECCEEEEEECCCEEEEEEEECCCHHHHHHHHHHHEEE IYGTELGIARPPDKPGPYRLGERKAEFDRSRAEGRIAAAFVTWRDAEKSTKT EECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA