Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158318494

Identifier: 158318494

GI number: 158318494

Start: 8226440

End: 8227273

Strand: Reverse

Name: 158318494

Synonym: Franean1_6762

Alternate gene names: NA

Gene position: 8227273-8226440 (Counterclockwise)

Preceding gene: 158318495

Following gene: 158318493

Centisome position: 91.6

GC content: 67.99

Gene sequence:

>834_bases
ATGAGTTTCACATACACCGCCGAGTTGCCCCTCGGCGATCACACCGTCTTCCGCCTGGCGGGTCTTCTCGTCGCGGAGCG
TCAGCGTCGCGGCACTCGCAACGGCACCCGCACGCTGTCCACGTTGGAACAGGCGGTCATGGTCCTGCGCTGGTTCTGTG
ACGGCACCAGGACCAGCCGGCTCTTCAAGGATCACGGGGTGTCCCGGTCGGTGGGCTACCGCTACCTGCACGAGGGCATC
GCCGTGCTTGCCTGGCAAGCCCCTGACCTGCGCGAAGCGCTGATGCGCGCCAGGATCGCCGGCTACGGCCACCTCATCAT
CGACGGTACGATCATCGAGACCGACCGGCTGCGCATGCCCGGCCCGACCGAGGGCGTGGACCTGTGGTGGTCCGGCAAGA
TCTCCAACCACGGCGGCAACATCCAGATCCTCTCGGCCCCCGACGACGGCTGGCCGCTGTGGGTCTCGGACGTCAGGCCC
GGCCGCGAGCACGACTCGACCGCGCTGTGCGCCGGAGGCGCGCAGCCGATCCTTGAGGAATGGGCCGCCGACCTGCACGA
GGTCCTGTTCGACCTCGGTTACGAAGGGTTGGGTAGCCCGGCCGGACCGCTCGCGACCGCCTACAAGAAGCCCAAGGGCG
GCGCCCTCACCGACGAACAGAAGGCGCACAACCGGGTCCACAACGCGCTGCGCGCCGTCGGCGAACGCGCGAACGCGCTG
CTCAAGGTCACCTTTCGGCTGCTCCGCAACATCACGATCGACCCCTGGAAGATCGGACTCGTCGCGAAAGCCGCCCTCGT
CATCCTCCACACCGAGCACCGCAGGACTGCCTGA

Upstream 100 bases:

>100_bases
CGCGGTGTGAGTGTCCCCGGGGCTGCGACGACGGAGGCGCGGGGCTCCGATAGGAAGTTGTTCCGACCAAAGAGCAACTC
CGAAGGAACCCCGCGCCTCC

Downstream 100 bases:

>100_bases
ACCCCAACACCGCAACACGGAACTGTTGCTACGCAAGGTGACGAATGGTTGCCGGGAAAGGTTCACTGAGCTACCGGATC
TGGTGCGCAAGTACAACGAG

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase; Response Regulator Receiver Protein; Transposase IS4 Family; Transposase Is4 Family Protein; ECF Subfamily RNA Polymerase Sigma-24 Factor

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSFTYTAELPLGDHTVFRLAGLLVAERQRRGTRNGTRTLSTLEQAVMVLRWFCDGTRTSRLFKDHGVSRSVGYRYLHEGI
AVLAWQAPDLREALMRARIAGYGHLIIDGTIIETDRLRMPGPTEGVDLWWSGKISNHGGNIQILSAPDDGWPLWVSDVRP
GREHDSTALCAGGAQPILEEWAADLHEVLFDLGYEGLGSPAGPLATAYKKPKGGALTDEQKAHNRVHNALRAVGERANAL
LKVTFRLLRNITIDPWKIGLVAKAALVILHTEHRRTA

Sequences:

>Translated_277_residues
MSFTYTAELPLGDHTVFRLAGLLVAERQRRGTRNGTRTLSTLEQAVMVLRWFCDGTRTSRLFKDHGVSRSVGYRYLHEGI
AVLAWQAPDLREALMRARIAGYGHLIIDGTIIETDRLRMPGPTEGVDLWWSGKISNHGGNIQILSAPDDGWPLWVSDVRP
GREHDSTALCAGGAQPILEEWAADLHEVLFDLGYEGLGSPAGPLATAYKKPKGGALTDEQKAHNRVHNALRAVGERANAL
LKVTFRLLRNITIDPWKIGLVAKAALVILHTEHRRTA
>Mature_276_residues
SFTYTAELPLGDHTVFRLAGLLVAERQRRGTRNGTRTLSTLEQAVMVLRWFCDGTRTSRLFKDHGVSRSVGYRYLHEGIA
VLAWQAPDLREALMRARIAGYGHLIIDGTIIETDRLRMPGPTEGVDLWWSGKISNHGGNIQILSAPDDGWPLWVSDVRPG
REHDSTALCAGGAQPILEEWAADLHEVLFDLGYEGLGSPAGPLATAYKKPKGGALTDEQKAHNRVHNALRAVGERANALL
KVTFRLLRNITIDPWKIGLVAKAALVILHTEHRRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30619; Mature: 30488

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTYTAELPLGDHTVFRLAGLLVAERQRRGTRNGTRTLSTLEQAVMVLRWFCDGTRTSR
CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LFKDHGVSRSVGYRYLHEGIAVLAWQAPDLREALMRARIAGYGHLIIDGTIIETDRLRMP
HHHHCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECEEEECCCCCCC
GPTEGVDLWWSGKISNHGGNIQILSAPDDGWPLWVSDVRPGREHDSTALCAGGAQPILEE
CCCCCEEEEEECEECCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHHH
WAADLHEVLFDLGYEGLGSPAGPLATAYKKPKGGALTDEQKAHNRVHNALRAVGERANAL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKVTFRLLRNITIDPWKIGLVAKAALVILHTEHRRTA
HHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure 
SFTYTAELPLGDHTVFRLAGLLVAERQRRGTRNGTRTLSTLEQAVMVLRWFCDGTRTSR
CEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LFKDHGVSRSVGYRYLHEGIAVLAWQAPDLREALMRARIAGYGHLIIDGTIIETDRLRMP
HHHHCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECEEEECCCCCCC
GPTEGVDLWWSGKISNHGGNIQILSAPDDGWPLWVSDVRPGREHDSTALCAGGAQPILEE
CCCCCEEEEEECEECCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEECCCCCHHHHH
WAADLHEVLFDLGYEGLGSPAGPLATAYKKPKGGALTDEQKAHNRVHNALRAVGERANAL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKVTFRLLRNITIDPWKIGLVAKAALVILHTEHRRTA
HHHHHHHHHCCCCCCHHHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA