Click here to switch to the map view.

The map label for this gene is 158318491

Identifier: 158318491

GI number: 158318491

Start: 8221282

End: 8222565

Strand: Direct

Name: 158318491

Synonym: Franean1_6759

Alternate gene names: NA

Gene position: 8221282-8222565 (Clockwise)

Preceding gene: 158318483

Following gene: 158318492

Centisome position: 91.53

GC content: 65.19

Gene sequence:

>1284_bases
GTGGATCCTCGTAGACGGGCGCGGGAGGCGTTCGCGACCCGCCTCTCCGAACTCATCGCAGATCGGGGAACTGATAACAG
TAAATTGTCGAGAAAGACGGGCGTCCCCCGTCAGGTGATCGGCGACGCGGCGAACGGGAACTCGCTGCCGTCCGCCACAG
TGATCGCGGAGCTAGAGTCCGCTCTCGTCTCAGGTGGGGAGATAGTCCGCCTGTGGAAAGCAGCGAAGCTCGAGAAGACC
AGCGAAACCCTCGACCGTTCCCTAGCGGACGACATGAGGCCGGACCAGGAGGACGAAACGGACAGGCGCACCTTCTTTGA
GTTCACCGCCGCGGGCTTCCTGGCAGCCGACGCCTATCGACGGCACGCGAACATCAAGGTCGACCCTCTCACGCTCGAGG
AACTCGACGACGCGCTCGCTCGATACGCCACACGGTTTACGACGACCCCGCACGGCCAACTCGCACCTGAGATCTCGGAG
ACCTGGAAGAGCGCCGAGGCGCTCCTCGCAGCCGGTGCCCGACCACGAGCACAGGCACAGCTGACCAGAGTGGCCGGGTA
CTCCGCCTACTACCTAGGCCGGCTGGCGTTCAACACCGGAGACAGCACCGCCGCACGTAGGTTCATCCGCCTCGCGGCAG
AACACGCCCAGGAGATCGACGATCCGATCTTGACCGGGTCGGTATGCGAGATGTTCTCCACGCTTGCCTACTACAGCCAC
CAGTACAGGGCTGCAGCGGACTTCGCCCGGCGCGGTTTCGCGGCTTCCGGCACCCACCCCTACGTCGCCGCGCGACTCGC
CTCCCACGAGGTGCGAGCCCAAGTCGCGCTCGGCGACGAGGCATCAGCACGAGCAGCGCTCGCATTGATGACCGAGCACG
TCGCCATCAGCCCTCCCATGCCGGGAGCCTCACCGTTTGGACCCGCGAACGCCGATCAGACGACTGCCCGGACACTCGCC
CTCCTCGGCCACGGCGATGCGGCCGAGCCCCTGGCTCGCGCATCTCTCGAGGCCTACGACCGGACAGGCGGAGGATTCGA
GGATAGAGGAAACGCCACACTCAACCTCTCCTGGGCACTGCTGCTCCGGCCCAATCCTGAACCAGAAGGCGCTGCTGCGC
TCGCACAGCAGGTCCTTAGCACGGTCGATGTTACGCCCACCTTCTCTGTCATGGACAAGATTGTCGATGTCGATCGGCGC
CTGGACCGGTACGCGCAGCTGCCTGCAGTCCAAGACTTCCGGGCGCAGCTCGCCGAACGTCCACGTCTGGTCCTTGTGCG
GTGA

Upstream 100 bases:

>100_bases
ATGACACACTCCGCACCAGCGTCGGTACAGACTGAAGCATCTTCTGCATGCATGAAGAAGATCGTCATGACAGGTCGATA
CTTGACAGGAGGACAGTGGC

Downstream 100 bases:

>100_bases
GTAACCCCACCATTCCGACCGTCGTCACAGATCGACTCATCCTCCGCGGATGGCGTGACGAAGACATCGAACCGTACGCG
GCGATGAACGCTGATGCGGA

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MDPRRRAREAFATRLSELIADRGTDNSKLSRKTGVPRQVIGDAANGNSLPSATVIAELESALVSGGEIVRLWKAAKLEKT
SETLDRSLADDMRPDQEDETDRRTFFEFTAAGFLAADAYRRHANIKVDPLTLEELDDALARYATRFTTTPHGQLAPEISE
TWKSAEALLAAGARPRAQAQLTRVAGYSAYYLGRLAFNTGDSTAARRFIRLAAEHAQEIDDPILTGSVCEMFSTLAYYSH
QYRAAADFARRGFAASGTHPYVAARLASHEVRAQVALGDEASARAALALMTEHVAISPPMPGASPFGPANADQTTARTLA
LLGHGDAAEPLARASLEAYDRTGGGFEDRGNATLNLSWALLLRPNPEPEGAAALAQQVLSTVDVTPTFSVMDKIVDVDRR
LDRYAQLPAVQDFRAQLAERPRLVLVR

Sequences:

>Translated_427_residues
MDPRRRAREAFATRLSELIADRGTDNSKLSRKTGVPRQVIGDAANGNSLPSATVIAELESALVSGGEIVRLWKAAKLEKT
SETLDRSLADDMRPDQEDETDRRTFFEFTAAGFLAADAYRRHANIKVDPLTLEELDDALARYATRFTTTPHGQLAPEISE
TWKSAEALLAAGARPRAQAQLTRVAGYSAYYLGRLAFNTGDSTAARRFIRLAAEHAQEIDDPILTGSVCEMFSTLAYYSH
QYRAAADFARRGFAASGTHPYVAARLASHEVRAQVALGDEASARAALALMTEHVAISPPMPGASPFGPANADQTTARTLA
LLGHGDAAEPLARASLEAYDRTGGGFEDRGNATLNLSWALLLRPNPEPEGAAALAQQVLSTVDVTPTFSVMDKIVDVDRR
LDRYAQLPAVQDFRAQLAERPRLVLVR
>Mature_427_residues
MDPRRRAREAFATRLSELIADRGTDNSKLSRKTGVPRQVIGDAANGNSLPSATVIAELESALVSGGEIVRLWKAAKLEKT
SETLDRSLADDMRPDQEDETDRRTFFEFTAAGFLAADAYRRHANIKVDPLTLEELDDALARYATRFTTTPHGQLAPEISE
TWKSAEALLAAGARPRAQAQLTRVAGYSAYYLGRLAFNTGDSTAARRFIRLAAEHAQEIDDPILTGSVCEMFSTLAYYSH
QYRAAADFARRGFAASGTHPYVAARLASHEVRAQVALGDEASARAALALMTEHVAISPPMPGASPFGPANADQTTARTLA
LLGHGDAAEPLARASLEAYDRTGGGFEDRGNATLNLSWALLLRPNPEPEGAAALAQQVLSTVDVTPTFSVMDKIVDVDRR
LDRYAQLPAVQDFRAQLAERPRLVLVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46319; Mature: 46319

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRRRAREAFATRLSELIADRGTDNSKLSRKTGVPRQVIGDAANGNSLPSATVIAELES
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH
ALVSGGEIVRLWKAAKLEKTSETLDRSLADDMRPDQEDETDRRTFFEFTAAGFLAADAYR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RHANIKVDPLTLEELDDALARYATRFTTTPHGQLAPEISETWKSAEALLAAGARPRAQAQ
HCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LTRVAGYSAYYLGRLAFNTGDSTAARRFIRLAAEHAQEIDDPILTGSVCEMFSTLAYYSH
HHHHHCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QYRAAADFARRGFAASGTHPYVAARLASHEVRAQVALGDEASARAALALMTEHVAISPPM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHEECCCC
PGASPFGPANADQTTARTLALLGHGDAAEPLARASLEAYDRTGGGFEDRGNATLNLSWAL
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEE
LLRPNPEPEGAAALAQQVLSTVDVTPTFSVMDKIVDVDRRLDRYAQLPAVQDFRAQLAER
EECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PRLVLVR
CCEEEEC
>Mature Secondary Structure
MDPRRRAREAFATRLSELIADRGTDNSKLSRKTGVPRQVIGDAANGNSLPSATVIAELES
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHH
ALVSGGEIVRLWKAAKLEKTSETLDRSLADDMRPDQEDETDRRTFFEFTAAGFLAADAYR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RHANIKVDPLTLEELDDALARYATRFTTTPHGQLAPEISETWKSAEALLAAGARPRAQAQ
HCCCCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH
LTRVAGYSAYYLGRLAFNTGDSTAARRFIRLAAEHAQEIDDPILTGSVCEMFSTLAYYSH
HHHHHCCHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
QYRAAADFARRGFAASGTHPYVAARLASHEVRAQVALGDEASARAALALMTEHVAISPPM
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHEECCCC
PGASPFGPANADQTTARTLALLGHGDAAEPLARASLEAYDRTGGGFEDRGNATLNLSWAL
CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEE
LLRPNPEPEGAAALAQQVLSTVDVTPTFSVMDKIVDVDRRLDRYAQLPAVQDFRAQLAER
EECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PRLVLVR
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA