| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is norQ [H]
Identifier: 158318466
GI number: 158318466
Start: 8189335
End: 8190492
Strand: Direct
Name: norQ [H]
Synonym: Franean1_6734
Alternate gene names: 158318466
Gene position: 8189335-8190492 (Clockwise)
Preceding gene: 158318465
Following gene: 158318467
Centisome position: 91.17
GC content: 69.6
Gene sequence:
>1158_bases ATGAGCAGCCCTGCCCCGACCCCCTCCGCCCCCGCCGCCTTTCGCCTAGCACCAGGCGGACTGCACGAAATGGTCGCCCG CTACCTGCTCGATCACCCTTCCGCATCCCACACACCGACCGCCGTGGCGAAGGCGTTGACCCGTAGCAACGGCGCCGTGG GCAACGCGCTGCACCGTCTGGCCGAGGCCGGGCAGGCGACGTTGACCAGCACCAAACCCCGCCGGTACACGGCCACCCCC ACCACGCGGGACGCATTCGGACGGACCGGCATACCGCCCGTGGCAAGGCCCCGCCCGGCCCCGGCACCGCCCCCGGCGGC GGTGCCGAAGCCCCGGCCGGCCCTTCCGCCCACGACGCCGGATGGGGGGATCATCCGCCCGTCGGGGCAGGTGTACCGGC CCCGGAAGCTGGCGGACCTGCCCGACGTGGAAGTCCTGCGCAAGCTACGCACGGCCGAAGTACCGGTCCTGCTCTACGGC CCGCCCGGTACGGGGAAGACGAGCGTGATCGAGGCCGCCTTCGGCGACGATCTGATCACGATCGCGGGGGATGGTGACAC CCAGGTCGGTGACCTGATCGGTGAGTACACCCAGACCCCCGACGGCCGGTACGAGTTCGTCTACGGGCCGCTCATCACCG CCATGCAGGAGGGGAAGGTCCTCCTCGTCGACGACGCCACTCTGATCAGCCCGGCGGTGCTCGCGGTGATGTACCCGGCG ATGGACGGCCGGAAAAGGATCATCGTGAAGGCGCACAAGGGCGAGGCGGTAGAAGCAGCCCCCGGCTTCTACGTGATCGC TGGACACAACCCGGGTGTCCACGGGGCGATCTTGAGCGAAGCGTTGTCATCCCGTTTCGCGGTGCAGGTCGAAGTGTCGA CCGACTTCGATCTCGCCACCAAACTCAAGATCGACAGCAGGGCGGTGCGGGTCGCGCGGAACCTCGCGCGGCGCCGCGAG TCCGGGGAGATCGGCTGGTCCCCGCAGCTGCGAGAGCTGATCGCCTTCCAGAAGATCGCGGACGTGTTGGGTGTCCCGGC GGCGGCAGCGAACCTGATGGGGATCGCGCCGGCCGAGGACCGGCCGGTGGTCGCGGACACGGTCGAGAAGGTCTTCGGGA TCAAGCTCGCGCCCCTCGCCCTCGGCAAGCAGATCTAA
Upstream 100 bases:
>100_bases AGCCCCTGCCTCACCCCCGGGTCGGGGTGGCGTGCGGATCCGCGCCACACGCCACCCCACCCCCAGCCACCCCGCACCCC GACCCTGCCTGGAGATCAGG
Downstream 100 bases:
>100_bases CCCCTCACCCCCGCCGTTGCGACCCTGTGACGTGCGGGGGGTGGGCGCAGCCCTGCCCACCCCCCGCACCGAGGAGCCCT GCCATGAAGCAGCAGCACGT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MSSPAPTPSAPAAFRLAPGGLHEMVARYLLDHPSASHTPTAVAKALTRSNGAVGNALHRLAEAGQATLTSTKPRRYTATP TTRDAFGRTGIPPVARPRPAPAPPPAAVPKPRPALPPTTPDGGIIRPSGQVYRPRKLADLPDVEVLRKLRTAEVPVLLYG PPGTGKTSVIEAAFGDDLITIAGDGDTQVGDLIGEYTQTPDGRYEFVYGPLITAMQEGKVLLVDDATLISPAVLAVMYPA MDGRKRIIVKAHKGEAVEAAPGFYVIAGHNPGVHGAILSEALSSRFAVQVEVSTDFDLATKLKIDSRAVRVARNLARRRE SGEIGWSPQLRELIAFQKIADVLGVPAAAANLMGIAPAEDRPVVADTVEKVFGIKLAPLALGKQI
Sequences:
>Translated_385_residues MSSPAPTPSAPAAFRLAPGGLHEMVARYLLDHPSASHTPTAVAKALTRSNGAVGNALHRLAEAGQATLTSTKPRRYTATP TTRDAFGRTGIPPVARPRPAPAPPPAAVPKPRPALPPTTPDGGIIRPSGQVYRPRKLADLPDVEVLRKLRTAEVPVLLYG PPGTGKTSVIEAAFGDDLITIAGDGDTQVGDLIGEYTQTPDGRYEFVYGPLITAMQEGKVLLVDDATLISPAVLAVMYPA MDGRKRIIVKAHKGEAVEAAPGFYVIAGHNPGVHGAILSEALSSRFAVQVEVSTDFDLATKLKIDSRAVRVARNLARRRE SGEIGWSPQLRELIAFQKIADVLGVPAAAANLMGIAPAEDRPVVADTVEKVFGIKLAPLALGKQI >Mature_384_residues SSPAPTPSAPAAFRLAPGGLHEMVARYLLDHPSASHTPTAVAKALTRSNGAVGNALHRLAEAGQATLTSTKPRRYTATPT TRDAFGRTGIPPVARPRPAPAPPPAAVPKPRPALPPTTPDGGIIRPSGQVYRPRKLADLPDVEVLRKLRTAEVPVLLYGP PGTGKTSVIEAAFGDDLITIAGDGDTQVGDLIGEYTQTPDGRYEFVYGPLITAMQEGKVLLVDDATLISPAVLAVMYPAM DGRKRIIVKAHKGEAVEAAPGFYVIAGHNPGVHGAILSEALSSRFAVQVEVSTDFDLATKLKIDSRAVRVARNLARRRES GEIGWSPQLRELIAFQKIADVLGVPAAAANLMGIAPAEDRPVVADTVEKVFGIKLAPLALGKQI
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CbbQ/NirQ/NorQ/GpvN family [H]
Homologues:
Organism=Homo sapiens, GI24415404, Length=149, Percent_Identity=32.2147651006711, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25145616, Length=170, Percent_Identity=34.1176470588235, Blast_Score=76, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6323135, Length=261, Percent_Identity=26.0536398467433, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI161076562, Length=149, Percent_Identity=30.2013422818792, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161076560, Length=149, Percent_Identity=30.2013422818792, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011704 - InterPro: IPR013615 [H]
Pfam domain/function: PF07728 AAA_5; PF08406 CbbQ_C [H]
EC number: NA
Molecular weight: Translated: 40529; Mature: 40398
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPAPTPSAPAAFRLAPGGLHEMVARYLLDHPSASHTPTAVAKALTRSNGAVGNALHRL CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH AEAGQATLTSTKPRRYTATPTTRDAFGRTGIPPVARPRPAPAPPPAAVPKPRPALPPTTP HHCCCCEEECCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGGIIRPSGQVYRPRKLADLPDVEVLRKLRTAEVPVLLYGPPGTGKTSVIEAAFGDDLIT CCCEECCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHEEEEECCCCEEE IAGDGDTQVGDLIGEYTQTPDGRYEFVYGPLITAMQEGKVLLVDDATLISPAVLAVMYPA EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCC MDGRKRIIVKAHKGEAVEAAPGFYVIAGHNPGVHGAILSEALSSRFAVQVEVSTDFDLAT CCCCEEEEEEECCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEE KLKIDSRAVRVARNLARRRESGEIGWSPQLRELIAFQKIADVLGVPAAAANLMGIAPAED EEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC RPVVADTVEKVFGIKLAPLALGKQI CCHHHHHHHHHHCCEEEHHHHCCCC >Mature Secondary Structure SSPAPTPSAPAAFRLAPGGLHEMVARYLLDHPSASHTPTAVAKALTRSNGAVGNALHRL CCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH AEAGQATLTSTKPRRYTATPTTRDAFGRTGIPPVARPRPAPAPPPAAVPKPRPALPPTTP HHCCCCEEECCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGGIIRPSGQVYRPRKLADLPDVEVLRKLRTAEVPVLLYGPPGTGKTSVIEAAFGDDLIT CCCEECCCCCCCCCHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHEEEEECCCCEEE IAGDGDTQVGDLIGEYTQTPDGRYEFVYGPLITAMQEGKVLLVDDATLISPAVLAVMYPA EECCCCCHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCC MDGRKRIIVKAHKGEAVEAAPGFYVIAGHNPGVHGAILSEALSSRFAVQVEVSTDFDLAT CCCCEEEEEEECCCCEEECCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEE KLKIDSRAVRVARNLARRRESGEIGWSPQLRELIAFQKIADVLGVPAAAANLMGIAPAED EEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCCC RPVVADTVEKVFGIKLAPLALGKQI CCHHHHHHHHHHCCEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9022686 [H]